RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Phxr4P15974 95 aa5.57□□□□□ -1.52
Usp28-201ENSMUST00000047349 2310050C09RikG5E8Z3 280 aa5.55□□□□□ -1.52
Usp28-201ENSMUST00000047349 Anapc11Q9CPX9 84 aa5.55□□□□□ -1.52
Usp28-201ENSMUST00000047349 HrnrQ8VHD8 2496 aa5.54□□□□□ -1.52
Usp28-201ENSMUST00000047349 Defb13Q8R2I4 64 aa5.54□□□□□ -1.52
Usp28-201ENSMUST00000047349 Krtap14O08640 167 aa5.53□□□□□ -1.52
Usp28-201ENSMUST00000047349 Gm9918Q8BUR5 174 aa5.53□□□□□ -1.52
Usp28-201ENSMUST00000047349 Gm10643Q3URG9 111 aa5.52□□□□□ -1.53
Usp28-201ENSMUST00000047349 Megf8P60882 2789 aa5.5□□□□□ -1.53
Usp28-201ENSMUST00000047349 FasnP19096 2504 aaKnown RBP5.5□□□□□ -1.53
Usp28-201ENSMUST00000047349 Cypt15B1AXS0 87 aa5.5□□□□□ -1.53
Usp28-201ENSMUST00000047349 Dnah11E9Q7N9 4488 aa5.49□□□□□ -1.53
Usp28-201ENSMUST00000047349 Muc6Q80T03 2850 aa5.48□□□□□ -1.53
Usp28-201ENSMUST00000047349 Ndufb1P0DN34 57 aa5.48□□□□□ -1.53
Usp28-201ENSMUST00000047349 Defb38Q7TNV7 63 aa5.47□□□□□ -1.53
Usp28-201ENSMUST00000047349 Csmd3Q80T79 3707 aa5.46□□□□□ -1.53
Usp28-201ENSMUST00000047349 Spaca4Q80ZQ0 127 aa5.46□□□□□ -1.54
Usp28-201ENSMUST00000047349 Gm20661K7N787 53 aa5.45□□□□□ -1.54
Usp28-201ENSMUST00000047349 Pkd1l1Q8R526 2615 aa5.45□□□□□ -1.54
Usp28-201ENSMUST00000047349 Dnah9B1AR51 4484 aa5.45□□□□□ -1.54
Usp28-201ENSMUST00000047349 PlecQ9QXS1 4691 aaKnown RBP5.44□□□□□ -1.54
Usp28-201ENSMUST00000047349 Fras1Q80T14 4010 aa5.43□□□□□ -1.54
Usp28-201ENSMUST00000047349 OxtP35454 125 aa5.43□□□□□ -1.54
Usp28-201ENSMUST00000047349 Limd2Q8BGB5 128 aa5.4□□□□□ -1.54
Usp28-201ENSMUST00000047349 SptssbQ925E8 76 aa5.4□□□□□ -1.54
Usp28-201ENSMUST00000047349 4933415A04RikQ9D443 101 aa5.4□□□□□ -1.54
Usp28-201ENSMUST00000047349 Gm21798J3QNU5 87 aa5.38□□□□□ -1.55
Usp28-201ENSMUST00000047349 Krtap10-4Q08EG8 221 aa5.38□□□□□ -1.55
Usp28-201ENSMUST00000047349 PrkdcP97313 4128 aa5.37□□□□□ -1.55
Usp28-201ENSMUST00000047349 Uqcr11Q9CPX8 56 aa5.37□□□□□ -1.55
Usp28-201ENSMUST00000047349 Krtap13O88375 197 aa5.37□□□□□ -1.55
Usp28-201ENSMUST00000047349 Wfdc3Q14AE4 130 aa5.36□□□□□ -1.55
Usp28-201ENSMUST00000047349 Gm10999F6Q4M4 69 aa5.34□□□□□ -1.55
Usp28-201ENSMUST00000047349 Q8BGJ3 129 aa5.3□□□□□ -1.56
Usp28-201ENSMUST00000047349 Rps29P62274 56 aa5.3□□□□□ -1.56
Usp28-201ENSMUST00000047349 FcgbpE9Q0B5 2583 aa5.29□□□□□ -1.56
Usp28-201ENSMUST00000047349 Gm26620Q9CY65 116 aa5.29□□□□□ -1.56
Usp28-201ENSMUST00000047349 Sec61gP60060 68 aa5.29□□□□□ -1.56
Usp28-201ENSMUST00000047349 2310034C09RikQ9D746 214 aa5.29□□□□□ -1.56
Usp28-201ENSMUST00000047349 Dnah7cA0A087WR13 4024 aa5.28□□□□□ -1.56
Usp28-201ENSMUST00000047349 4930507D05RikQ8C9C9 103 aa5.28□□□□□ -1.56
Usp28-201ENSMUST00000047349 Dnah2P0C6F1 4456 aa5.27□□□□□ -1.57
Usp28-201ENSMUST00000047349 Vps13dB1ART2 4390 aa5.26□□□□□ -1.57
Usp28-201ENSMUST00000047349 Krtap10-10A0A1W2P7T6 217 aa5.23□□□□□ -1.57
Usp28-201ENSMUST00000047349 Dnah7aE9Q0T8 4024 aa5.22□□□□□ -1.57
Usp28-201ENSMUST00000047349 Gm2696A0A1W2P709 240 aa5.22□□□□□ -1.57
Usp28-201ENSMUST00000047349 Hectd4E9Q2E4 4418 aa5.21□□□□□ -1.57
Usp28-201ENSMUST00000047349 ApobE9Q414 4505 aa5.21□□□□□ -1.58
Usp28-201ENSMUST00000047349 RetnlbQ99P86 105 aa5.21□□□□□ -1.58
Usp28-201ENSMUST00000047349 A930033H14RikG5E8X6 103 aa5.2□□□□□ -1.58
Usp28-201ENSMUST00000047349 Gm3646F6S692 53 aa5.19□□□□□ -1.58
Usp28-201ENSMUST00000047349 Dnah5Q8VHE6 4621 aa5.19□□□□□ -1.58
Usp28-201ENSMUST00000047349 2310079G19RikQ9D6L6 185 aa5.19□□□□□ -1.58
Usp28-201ENSMUST00000047349 9230102O04RikA2ASX7 82 aa5.18□□□□□ -1.58
Usp28-201ENSMUST00000047349 Gm4491E0CX42 125 aa5.18□□□□□ -1.58
Usp28-201ENSMUST00000047349 Krtap3-2Q9D638 99 aa5.16□□□□□ -1.58
Usp28-201ENSMUST00000047349 Krtap3-3Q9D7P0 99 aa5.16□□□□□ -1.58
Usp28-201ENSMUST00000047349 Defb1P56386 69 aa5.16□□□□□ -1.58
Usp28-201ENSMUST00000047349 Ndufs5Q99LY9 106 aa5.15□□□□□ -1.59
Usp28-201ENSMUST00000047349 Pkd1O08852 4293 aa5.14□□□□□ -1.59
Usp28-201ENSMUST00000047349 D6Ertd527eA0A0N4SWI3 464 aa5.12□□□□□ -1.59
Usp28-201ENSMUST00000047349 Lrp1bQ9JI18 4599 aa5.11□□□□□ -1.59
Usp28-201ENSMUST00000047349 Gm11939A2A592 99 aa5.08□□□□□ -1.6
Usp28-201ENSMUST00000047349 1700042G07RikB1AUF7 90 aa5.08□□□□□ -1.6
Usp28-201ENSMUST00000047349 Stard9Q80TF6 4561 aa5.08□□□□□ -1.6
Usp28-201ENSMUST00000047349 Gm5767A0A0J9YTU8 78 aa5.07□□□□□ -1.6
Usp28-201ENSMUST00000047349 Dync1h1Q9JHU4 4644 aaKnown RBP5.04□□□□□ -1.6
Usp28-201ENSMUST00000047349 SacsQ9JLC8 4582 aa5.03□□□□□ -1.6
Usp28-201ENSMUST00000047349 Fat2Q5F226 4351 aa5.01□□□□□ -1.61
Usp28-201ENSMUST00000047349 Cox6b2Q80ZN9 88 aa5□□□□□ -1.61
Usp28-201ENSMUST00000047349 Fat1A0A1L1SQU7 4645 aa4.99□□□□□ -1.61
Usp28-201ENSMUST00000047349 Pkhd1E9PZ36 4059 aa4.97□□□□□ -1.61
Usp28-201ENSMUST00000047349 Rnase13Q5GAM7 153 aa4.97□□□□□ -1.61
Usp28-201ENSMUST00000047349 Pla2g10Q9QXX3 151 aa4.95□□□□□ -1.62
Usp28-201ENSMUST00000047349 Gm17606F6ZL36 78 aa4.93□□□□□ -1.62
Usp28-201ENSMUST00000047349 Krtap19-5O08632 62 aa4.91□□□□□ -1.62
Usp28-201ENSMUST00000047349 Rpl37Q9D823 97 aa4.91□□□□□ -1.62
Usp28-201ENSMUST00000047349 Gm9955Q8CEJ8 102 aa4.9□□□□□ -1.63
Usp28-201ENSMUST00000047349 Pkhd1l1Q80ZA4 4249 aa4.89□□□□□ -1.63
Usp28-201ENSMUST00000047349 Krtap15-1Q9QZU5 150 aa4.88□□□□□ -1.63
Usp28-201ENSMUST00000047349 Gm9821Q8K076 103 aa4.86□□□□□ -1.63
Usp28-201ENSMUST00000047349 Gm20537G3UYK7 97 aa4.84□□□□□ -1.64
Usp28-201ENSMUST00000047349 Gm17416Q30KP4 66 aa4.83□□□□□ -1.64
Usp28-201ENSMUST00000047349 Gm5965D3Z724 196 aa4.83□□□□□ -1.64
Usp28-201ENSMUST00000047349 Gm3880A0A1B0GSB3 72 aa4.81□□□□□ -1.64
Usp28-201ENSMUST00000047349 Ryr3A2AGL3 4863 aa4.8□□□□□ -1.64
Usp28-201ENSMUST00000047349 Gm9736A0A1W2P7N1 277 aa4.8□□□□□ -1.64
Usp28-201ENSMUST00000047349 Gm10382Q3V0T5 144 aa4.78□□□□□ -1.64
Usp28-201ENSMUST00000047349 Ryr2E9Q401 4966 aaKnown RBP4.75□□□□□ -1.65
Usp28-201ENSMUST00000047349 Vps13bQ80TY5 3993 aa4.75□□□□□ -1.65
Usp28-201ENSMUST00000047349 Gm12216A0A1W2P827 62 aa4.72□□□□□ -1.65
Usp28-201ENSMUST00000047349 Fat3Q8BNA6 4555 aa4.71□□□□□ -1.66
Usp28-201ENSMUST00000047349 Lrp1Q91ZX7 4545 aaKnown RBP4.7□□□□□ -1.66
Usp28-201ENSMUST00000047349 2210017I01RikA0A0A6YVV1 95 aa4.7□□□□□ -1.66
Usp28-201ENSMUST00000047349 Gm21887J3QQ04 176 aa4.69□□□□□ -1.66
Usp28-201ENSMUST00000047349 Dnah8Q91XQ0 4731 aa4.68□□□□□ -1.66
Usp28-201ENSMUST00000047349 Krtap3-1A2A591 98 aa4.68□□□□□ -1.66
Usp28-201ENSMUST00000047349 Kmt2cQ8BRH4 4903 aa4.67□□□□□ -1.66
Usp28-201ENSMUST00000047349 Romo1P60603 79 aa4.65□□□□□ -1.67
Usp28-201ENSMUST00000047349 Ryr1E9PZQ0 5035 aa4.64□□□□□ -1.67
Retrieved 100 of 22,080 RNA–protein pairs in 90.6 ms