RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Sprr2jO70561 109 aa5.27□□□□□ -1.57
Trim39-201ENSMUST00000042717 Gm28230A0A0A0MQ91 144 aa5.26□□□□□ -1.57
Trim39-201ENSMUST00000042717 Igkv3-10A0A0G2JGN0 119 aa5.26□□□□□ -1.57
Trim39-201ENSMUST00000042717 SnurfQ9WU12 71 aa5.26□□□□□ -1.57
Trim39-201ENSMUST00000042717 Lrp1bQ9JI18 4599 aa5.26□□□□□ -1.57
Trim39-201ENSMUST00000042717 Pde6gP09174 87 aa5.26□□□□□ -1.57
Trim39-201ENSMUST00000042717 Defb39Q70KL3 74 aa5.26□□□□□ -1.57
Trim39-201ENSMUST00000042717 Gm44790A0A0N4SV91 103 aa5.25□□□□□ -1.57
Trim39-201ENSMUST00000042717 1700042G07RikB1AUF7 90 aa5.25□□□□□ -1.57
Trim39-201ENSMUST00000042717 BikO70337 150 aa5.24□□□□□ -1.57
Trim39-201ENSMUST00000042717 A530084C06RikQ3UTW2 186 aa5.24□□□□□ -1.57
Trim39-201ENSMUST00000042717 Znf706Q9D115 76 aaKnown RBP5.24□□□□□ -1.57
Trim39-201ENSMUST00000042717 Gm12353A2AGJ4 60 aa5.23□□□□□ -1.57
Trim39-201ENSMUST00000042717 Gm17689B3GLJ4 109 aa5.23□□□□□ -1.57
Trim39-201ENSMUST00000042717 Rpl37aP61514 92 aa5.23□□□□□ -1.57
Trim39-201ENSMUST00000042717 C130032M10RikQ8C888 123 aa5.22□□□□□ -1.57
Trim39-201ENSMUST00000042717 Pkhd1E9PZ36 4059 aa5.22□□□□□ -1.57
Trim39-201ENSMUST00000042717 Igkv3-4A0A140T8Q4 119 aa5.22□□□□□ -1.57
Trim39-201ENSMUST00000042717 Mrpl34Q99N91 92 aa5.22□□□□□ -1.57
Trim39-201ENSMUST00000042717 Ryr1E9PZQ0 5035 aa5.21□□□□□ -1.58
Trim39-201ENSMUST00000042717 Fam229bQ8CF36 80 aa5.21□□□□□ -1.58
Trim39-201ENSMUST00000042717 Chchd10Q7TNL9 138 aa5.2□□□□□ -1.58
Trim39-201ENSMUST00000042717 Gm21886J3QJU9 214 aa5.2□□□□□ -1.58
Trim39-201ENSMUST00000042717 Hectd4E9Q2E4 4418 aa5.19□□□□□ -1.58
Trim39-201ENSMUST00000042717 Cypt14J3QPF7 87 aa5.18□□□□□ -1.58
Trim39-201ENSMUST00000042717 SacsQ9JLC8 4582 aa5.18□□□□□ -1.58
Trim39-201ENSMUST00000042717 Spaca4Q80ZQ0 127 aa5.18□□□□□ -1.58
Trim39-201ENSMUST00000042717 Reg3aO09037 175 aa5.17□□□□□ -1.58
Trim39-201ENSMUST00000042717 Spink8Q09TK9 105 aa5.17□□□□□ -1.58
Trim39-201ENSMUST00000042717 Spint4Q9D263 159 aa5.17□□□□□ -1.58
Trim39-201ENSMUST00000042717 Prr15lQ8JZM2 100 aa5.15□□□□□ -1.59
Trim39-201ENSMUST00000042717 Gm26620Q9CY65 116 aa5.15□□□□□ -1.59
Trim39-201ENSMUST00000042717 Gm10643Q3URG9 111 aa5.14□□□□□ -1.59
Trim39-201ENSMUST00000042717 Cdc42se1Q8BHL7 80 aa5.14□□□□□ -1.59
Trim39-201ENSMUST00000042717 Kmt2cQ8BRH4 4903 aa5.13□□□□□ -1.59
Trim39-201ENSMUST00000042717 Fat2Q5F226 4351 aa5.12□□□□□ -1.59
Trim39-201ENSMUST00000042717 Gm9821Q8K076 103 aa5.12□□□□□ -1.59
Trim39-201ENSMUST00000042717 Igkv8-19A0A0G2JFN8 121 aa5.11□□□□□ -1.59
Trim39-201ENSMUST00000042717 Lrp1Q91ZX7 4545 aaKnown RBP5.1□□□□□ -1.59
Trim39-201ENSMUST00000042717 Gm37013Q8K491 104 aa5.09□□□□□ -1.6
Trim39-201ENSMUST00000042717 Gm16253D3Z167 63 aa5.08□□□□□ -1.6
Trim39-201ENSMUST00000042717 4933415A04RikQ9D443 101 aa5.08□□□□□ -1.6
Trim39-201ENSMUST00000042717 Gm20538F6Z9R1 75 aa5.07□□□□□ -1.6
Trim39-201ENSMUST00000042717 Coa6Q8BGD8 79 aa5.07□□□□□ -1.6
Trim39-201ENSMUST00000042717 Defb12Q8K4N3 78 aa5.07□□□□□ -1.6
Trim39-201ENSMUST00000042717 Krtap19-5O08632 62 aa5.06□□□□□ -1.6
Trim39-201ENSMUST00000042717 Prm2P07978 107 aa5.06□□□□□ -1.6
Trim39-201ENSMUST00000042717 Abca13Q5SSE9 5034 aa5.05□□□□□ -1.6
Trim39-201ENSMUST00000042717 Vps13bQ80TY5 3993 aa5.02□□□□□ -1.61
Trim39-201ENSMUST00000042717 Dnah8Q91XQ0 4731 aa5.02□□□□□ -1.61
Trim39-201ENSMUST00000042717 Chtf8P0CG14 533 aa5.01□□□□□ -1.61
Trim39-201ENSMUST00000042717 2310034C09RikQ9D746 214 aa5.01□□□□□ -1.61
Trim39-201ENSMUST00000042717 Fat3Q8BNA6 4555 aa5□□□□□ -1.61
Trim39-201ENSMUST00000042717 Gm9736A0A1W2P7N1 277 aa5□□□□□ -1.61
Trim39-201ENSMUST00000042717 A0A286YE49 62 aa5□□□□□ -1.61
Trim39-201ENSMUST00000042717 Herc2Q4U2R1 4836 aa4.99□□□□□ -1.61
Trim39-201ENSMUST00000042717 Cypt15B1AXS0 87 aa4.99□□□□□ -1.61
Trim39-201ENSMUST00000042717 Igkv3-3A0A140T8Q0 119 aa4.99□□□□□ -1.61
Trim39-201ENSMUST00000042717 Atox1O08997 68 aaKnown RBP4.99□□□□□ -1.61
Trim39-201ENSMUST00000042717 Coa5Q99M07 74 aa4.99□□□□□ -1.61
Trim39-201ENSMUST00000042717 Gm10267M0QWD8 85 aa4.98□□□□□ -1.61
Trim39-201ENSMUST00000042717 Kiaa1109A2AAE1 5005 aa4.98□□□□□ -1.61
Trim39-201ENSMUST00000042717 Pkhd1l1Q80ZA4 4249 aa4.98□□□□□ -1.61
Trim39-201ENSMUST00000042717 Gm12216A0A1W2P827 62 aa4.98□□□□□ -1.61
Trim39-201ENSMUST00000042717 Defb13Q8R2I4 64 aa4.97□□□□□ -1.61
Trim39-201ENSMUST00000042717 Phxr4P15974 95 aa4.97□□□□□ -1.61
Trim39-201ENSMUST00000042717 Gm2310J3QNJ2 377 aa4.96□□□□□ -1.62
Trim39-201ENSMUST00000042717 1700074P13RikQ9D9G7 251 aa4.95□□□□□ -1.62
Trim39-201ENSMUST00000042717 Sec61bQ9CQS8 96 aaKnown RBP4.95□□□□□ -1.62
Trim39-201ENSMUST00000042717 Mycbp2Q7TPH6 4711 aa4.93□□□□□ -1.62
Trim39-201ENSMUST00000042717 HydinQ80W93 5154 aa4.93□□□□□ -1.62
Trim39-201ENSMUST00000042717 Mp68P56379 58 aa4.91□□□□□ -1.62
Trim39-201ENSMUST00000042717 Defb38Q7TNV7 63 aa4.91□□□□□ -1.62
Trim39-201ENSMUST00000042717 Birc6O88738 4882 aa4.89□□□□□ -1.63
Trim39-201ENSMUST00000042717 D6Ertd527eA0A0N4SWI3 464 aa4.88□□□□□ -1.63
Trim39-201ENSMUST00000042717 PcloQ9QYX7 5068 aa4.86□□□□□ -1.63
Trim39-201ENSMUST00000042717 Gm5965D3Z724 196 aa4.85□□□□□ -1.63
Trim39-201ENSMUST00000042717 Rps29P62274 56 aa4.85□□□□□ -1.63
Trim39-201ENSMUST00000042717 Gm3646F6S692 53 aa4.83□□□□□ -1.64
Trim39-201ENSMUST00000042717 Dnhd1D3Z2X2 4750 aa4.81□□□□□ -1.64
Trim39-201ENSMUST00000042717 Gm11939A2A592 99 aa4.81□□□□□ -1.64
Trim39-201ENSMUST00000042717 Ndufb1P0DN34 57 aa4.81□□□□□ -1.64
Trim39-201ENSMUST00000042717 Lrp2A2ARV4 4660 aa4.79□□□□□ -1.64
Trim39-201ENSMUST00000042717 Gm5767A0A0J9YTU8 78 aa4.77□□□□□ -1.65
Trim39-201ENSMUST00000042717 Krtap15-1Q9QZU5 150 aa4.77□□□□□ -1.65
Trim39-201ENSMUST00000042717 SptssbQ925E8 76 aa4.76□□□□□ -1.65
Trim39-201ENSMUST00000042717 Gm10999F6Q4M4 69 aa4.76□□□□□ -1.65
Trim39-201ENSMUST00000042717 Limd2Q8BGB5 128 aa4.73□□□□□ -1.65
Trim39-201ENSMUST00000042717 Q8BGJ3 129 aa4.73□□□□□ -1.65
Trim39-201ENSMUST00000042717 Ndufs5Q99LY9 106 aa4.73□□□□□ -1.65
Trim39-201ENSMUST00000042717 Gm20661K7N787 53 aa4.72□□□□□ -1.65
Trim39-201ENSMUST00000042717 Gm21798J3QNU5 87 aa4.71□□□□□ -1.66
Trim39-201ENSMUST00000042717 Gm4491E0CX42 125 aa4.69□□□□□ -1.66
Trim39-201ENSMUST00000042717 Uqcr11Q9CPX8 56 aa4.69□□□□□ -1.66
Trim39-201ENSMUST00000042717 Krtap3-2Q9D638 99 aa4.69□□□□□ -1.66
Trim39-201ENSMUST00000042717 Krtap3-3Q9D7P0 99 aa4.69□□□□□ -1.66
Trim39-201ENSMUST00000042717 Pla2g10Q9QXX3 151 aa4.67□□□□□ -1.66
Trim39-201ENSMUST00000042717 Herc1E9PZP8 4859 aa4.67□□□□□ -1.66
Trim39-201ENSMUST00000042717 Lce1mQ9CR91 182 aa4.64□□□□□ -1.67
Trim39-201ENSMUST00000042717 Defb1P56386 69 aa4.64□□□□□ -1.67
Retrieved 100 of 22,080 RNA–protein pairs in 75.8 ms