RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 LrbaQ9ESE1 2856 aa5.27□□□□□ -1.57
Ttc28-201ENSMUST00000040111 Tenm4Q3UHK6 2771 aa5.26□□□□□ -1.57
Ttc28-201ENSMUST00000040111 Akap9Q70FJ1 3797 aa5.25□□□□□ -1.57
Ttc28-201ENSMUST00000040111 Rpl37Q9D823 97 aa5.25□□□□□ -1.57
Ttc28-201ENSMUST00000040111 Gm10382Q3V0T5 144 aa5.24□□□□□ -1.57
Ttc28-201ENSMUST00000040111 Sprr1aQ62266 144 aa5.24□□□□□ -1.57
Ttc28-201ENSMUST00000040111 Zfhx3Q61329 3726 aa5.23□□□□□ -1.57
Ttc28-201ENSMUST00000040111 Gm11565A2A4M7 156 aa5.23□□□□□ -1.57
Ttc28-201ENSMUST00000040111 Tenm3Q9WTS6 2715 aa5.22□□□□□ -1.57
Ttc28-201ENSMUST00000040111 4933415A04RikQ9D443 101 aa5.22□□□□□ -1.57
Ttc28-201ENSMUST00000040111 Fam229aB2KGE5 128 aa5.22□□□□□ -1.57
Ttc28-201ENSMUST00000040111 A730071L15RikQ8C4X0 137 aa5.2□□□□□ -1.58
Ttc28-201ENSMUST00000040111 Krtap14O08640 167 aa5.18□□□□□ -1.58
Ttc28-201ENSMUST00000040111 SmcpP15265 143 aa5.17□□□□□ -1.58
Ttc28-201ENSMUST00000040111 Gm21887J3QQ04 176 aa5.17□□□□□ -1.58
Ttc28-201ENSMUST00000040111 Wdfy3Q6VNB8 3508 aa5.16□□□□□ -1.58
Ttc28-201ENSMUST00000040111 Dchs1E9PVD3 3291 aa5.15□□□□□ -1.59
Ttc28-201ENSMUST00000040111 Tnp2P11378 117 aa5.13□□□□□ -1.59
Ttc28-201ENSMUST00000040111 2310061N02RikQ9D6S9 174 aa5.13□□□□□ -1.59
Ttc28-201ENSMUST00000040111 Gm16253D3Z167 63 aa5.12□□□□□ -1.59
Ttc28-201ENSMUST00000040111 Krtap29-1A2A5X4 342 aa5.11□□□□□ -1.59
Ttc28-201ENSMUST00000040111 Gm19426M0QWC7 77 aa5.11□□□□□ -1.59
Ttc28-201ENSMUST00000040111 Ndufaf8A2AMZ4 74 aa5.1□□□□□ -1.59
Ttc28-201ENSMUST00000040111 Megf8P60882 2789 aa5.1□□□□□ -1.59
Ttc28-201ENSMUST00000040111 SpegQ62407 3262 aa5.1□□□□□ -1.59
Ttc28-201ENSMUST00000040111 2310057N15RikQ9D6T8 200 aa5.1□□□□□ -1.59
Ttc28-201ENSMUST00000040111 BC029722A0A0N4SW31 51 aa5.1□□□□□ -1.59
Ttc28-201ENSMUST00000040111 SpenQ62504 3644 aaKnown RBP5.1□□□□□ -1.59
Ttc28-201ENSMUST00000040111 Gm5767A0A0J9YTU8 78 aa5.08□□□□□ -1.6
Ttc28-201ENSMUST00000040111 Csmd1Q923L3 3564 aa5.08□□□□□ -1.6
Ttc28-201ENSMUST00000040111 Cox6b2Q80ZN9 88 aa5.07□□□□□ -1.6
Ttc28-201ENSMUST00000040111 Helz2E9QAM5 2947 aaKnown RBP5.05□□□□□ -1.6
Ttc28-201ENSMUST00000040111 Smg1Q8BKX6 3658 aaKnown RBP5.04□□□□□ -1.6
Ttc28-201ENSMUST00000040111 RelnQ60841 3461 aa5.04□□□□□ -1.6
Ttc28-201ENSMUST00000040111 Gm2310J3QNJ2 377 aa5.03□□□□□ -1.6
Ttc28-201ENSMUST00000040111 Gm9112A2AI92 75 aa5.03□□□□□ -1.6
Ttc28-201ENSMUST00000040111 Tenm2Q9WTS5 2764 aa5.02□□□□□ -1.61
Ttc28-201ENSMUST00000040111 Gm5965D3Z724 196 aa5.01□□□□□ -1.61
Ttc28-201ENSMUST00000040111 Gm9736A0A1W2P7N1 277 aa5.01□□□□□ -1.61
Ttc28-201ENSMUST00000040111 Cmya5Q70KF4 3739 aa4.99□□□□□ -1.61
Ttc28-201ENSMUST00000040111 Gm884A2A9H6 3643 aa4.96□□□□□ -1.62
Ttc28-201ENSMUST00000040111 Gm10318A0A1W2P728 225 aa4.95□□□□□ -1.62
Ttc28-201ENSMUST00000040111 Lama5Q61001 3718 aa4.95□□□□□ -1.62
Ttc28-201ENSMUST00000040111 VwfQ8CIZ8 2813 aa4.92□□□□□ -1.62
Ttc28-201ENSMUST00000040111 OtogO55225 2910 aa4.89□□□□□ -1.63
Ttc28-201ENSMUST00000040111 Zfhx4Q9JJN2 3550 aa4.89□□□□□ -1.63
Ttc28-201ENSMUST00000040111 Gm40193A0A1B0GT39 78 aa4.86□□□□□ -1.63
Ttc28-201ENSMUST00000040111 Tnp1P10856 55 aa4.86□□□□□ -1.63
Ttc28-201ENSMUST00000040111 Rps29P62274 56 aa4.84□□□□□ -1.63
Ttc28-201ENSMUST00000040111 D6Ertd527eA0A0N4SWI3 464 aa4.83□□□□□ -1.64
Ttc28-201ENSMUST00000040111 Fbn1Q61554 2873 aaKnown RBP4.81□□□□□ -1.64
Ttc28-201ENSMUST00000040111 Muc5acE9QAQ8 3455 aa4.79□□□□□ -1.64
Ttc28-201ENSMUST00000040111 Gm9918Q8BUR5 174 aa4.76□□□□□ -1.65
Ttc28-201ENSMUST00000040111 Crct1Q6PAI5 102 aa4.74□□□□□ -1.65
Ttc28-201ENSMUST00000040111 Col7a1Q63870 2944 aa4.74□□□□□ -1.65
Ttc28-201ENSMUST00000040111 Prm2P07978 107 aa4.73□□□□□ -1.65
Ttc28-201ENSMUST00000040111 Gm20537G3UYK7 97 aa4.69□□□□□ -1.66
Ttc28-201ENSMUST00000040111 Ank2Q8C8R3 3898 aa4.68□□□□□ -1.66
Ttc28-201ENSMUST00000040111 Csmd2V9GX34 3611 aa4.66□□□□□ -1.66
Ttc28-201ENSMUST00000040111 Svep1A2AVA0 3567 aa4.64□□□□□ -1.67
Ttc28-201ENSMUST00000040111 LystP97412 3788 aa4.61□□□□□ -1.67
Ttc28-201ENSMUST00000040111 Muc4Q8JZM8 3443 aa4.6□□□□□ -1.67
Ttc28-201ENSMUST00000040111 B930094E09RikQ8C4T2 136 aa4.57□□□□□ -1.68
Ttc28-201ENSMUST00000040111 A930033H14RikG5E8X6 103 aa4.54□□□□□ -1.68
Ttc28-201ENSMUST00000040111 Xirp2Q4U4S6 3784 aa4.46□□□□□ -1.7
Ttc28-201ENSMUST00000040111 Krtap19-5O08632 62 aa4.42□□□□□ -1.7
Ttc28-201ENSMUST00000040111 2310079G19RikQ9D6L6 185 aa4.42□□□□□ -1.7
Ttc28-201ENSMUST00000040111 Muc6Q80T03 2850 aa4.41□□□□□ -1.7
Ttc28-201ENSMUST00000040111 CubnQ9JLB4 3623 aa4.38□□□□□ -1.71
Ttc28-201ENSMUST00000040111 Gm17402F6Z0L5 76 aa4.29□□□□□ -1.72
Ttc28-201ENSMUST00000040111 Csmd3Q80T79 3707 aa4.28□□□□□ -1.72
Ttc28-201ENSMUST00000040111 Gm17416Q30KP4 66 aa4.27□□□□□ -1.73
Ttc28-201ENSMUST00000040111 Hspg2Q05793 3707 aaKnown RBP4.25□□□□□ -1.73
Ttc28-201ENSMUST00000040111 4933428G20RikQ9D3X4 101 aa4.25□□□□□ -1.73
Ttc28-201ENSMUST00000040111 BsnO88737 3942 aa4.24□□□□□ -1.73
Ttc28-201ENSMUST00000040111 Gm11939A2A592 99 aa4.22□□□□□ -1.73
Ttc28-201ENSMUST00000040111 Krtap13-1Q8K198 168 aa4.22□□□□□ -1.73
Ttc28-201ENSMUST00000040111 Gm18596A0A1W2P860 280 aa4.18□□□□□ -1.74
Ttc28-201ENSMUST00000040111 2210017I01RikA0A0A6YVV1 95 aa4.17□□□□□ -1.74
Ttc28-201ENSMUST00000040111 Gm19668J3QMD1 248 aa4.13□□□□□ -1.75
Ttc28-201ENSMUST00000040111 Dnah10D3YYQ8 4591 aa4.11□□□□□ -1.75
Ttc28-201ENSMUST00000040111 LorP18165 486 aa4.11□□□□□ -1.75
Ttc28-201ENSMUST00000040111 Dnah14A0A140LIJ4 4489 aa4.09□□□□□ -1.75
Ttc28-201ENSMUST00000040111 Gm6358A0A087WPH4 74 aa4.06□□□□□ -1.76
Ttc28-201ENSMUST00000040111 Huwe1Q7TMY8 4377 aaKnown RBP4.02□□□□□ -1.77
Ttc28-201ENSMUST00000040111 Gm19402J3QJV4 266 aa4□□□□□ -1.77
Ttc28-201ENSMUST00000040111 Dnah3Q8BW94 4083 aa4□□□□□ -1.77
Ttc28-201ENSMUST00000040111 Dnah7bL7N1Y0 4068 aa3.99□□□□□ -1.77
Ttc28-201ENSMUST00000040111 Krtap3-1A2A591 98 aa3.99□□□□□ -1.77
Ttc28-201ENSMUST00000040111 Krtap3-2Q9D638 99 aa3.95□□□□□ -1.78
Ttc28-201ENSMUST00000040111 Krtap3-3Q9D7P0 99 aa3.95□□□□□ -1.78
Ttc28-201ENSMUST00000040111 Dnah5Q8VHE6 4621 aa3.94□□□□□ -1.78
Ttc28-201ENSMUST00000040111 Vps13dB1ART2 4390 aa3.9□□□□□ -1.79
Ttc28-201ENSMUST00000040111 PlecQ9QXS1 4691 aaKnown RBP3.9□□□□□ -1.79
Ttc28-201ENSMUST00000040111 Vps13bQ80TY5 3993 aa3.87□□□□□ -1.79
Ttc28-201ENSMUST00000040111 Sprr2kO70562 68 aa3.84□□□□□ -1.79
Ttc28-201ENSMUST00000040111 Kmt2aP55200 3966 aa3.84□□□□□ -1.79
Ttc28-201ENSMUST00000040111 Stard9Q80TF6 4561 aa3.83□□□□□ -1.8
Ttc28-201ENSMUST00000040111 Ryr1E9PZQ0 5035 aa3.82□□□□□ -1.8
Ttc28-201ENSMUST00000040111 Dnah17Q69Z23 4481 aa3.8□□□□□ -1.8
Retrieved 100 of 22,080 RNA–protein pairs in 83.7 ms