RNA–Protein interactions for RNA: ENSMUST00000028799.11

Knl1-201, Transcript of Kinetochore scaffold 1, mousemouse

TSL 1 (best) BASIC

Gene Knl1, Length 5,527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1-201ENSMUST00000028799 A930033H14RikG5E8X6 103 aa8.69□□□□□ -1.02
Knl1-201ENSMUST00000028799 FryE9Q8I9 3020 aa8.66□□□□□ -1.02
Knl1-201ENSMUST00000028799 ApcQ61315 2845 aa8.64□□□□□ -1.03
Knl1-201ENSMUST00000028799 FlncQ8VHX6 2726 aaKnown RBP8.64□□□□□ -1.03
Knl1-201ENSMUST00000028799 Srrm2Q8BTI8 2703 aaKnown RBP8.63□□□□□ -1.03
Knl1-201ENSMUST00000028799 Tex15F8VPN2 2785 aa8.61□□□□□ -1.03
Knl1-201ENSMUST00000028799 Tenm3Q9WTS6 2715 aa8.6□□□□□ -1.03
Knl1-201ENSMUST00000028799 FcgbpE9Q0B5 2583 aa8.6□□□□□ -1.03
Knl1-201ENSMUST00000028799 Brca2P97929 3329 aa8.59□□□□□ -1.03
Knl1-201ENSMUST00000028799 Zfhx3Q61329 3726 aa8.58□□□□□ -1.04
Knl1-201ENSMUST00000028799 Trank1Q8BV79 2999 aa8.58□□□□□ -1.04
Knl1-201ENSMUST00000028799 2310079G19RikQ9D6L6 185 aa8.58□□□□□ -1.04
Knl1-201ENSMUST00000028799 Gm20537G3UYK7 97 aa8.57□□□□□ -1.04
Knl1-201ENSMUST00000028799 Gm40193A0A1B0GT39 78 aa8.55□□□□□ -1.04
Knl1-201ENSMUST00000028799 Gm5965D3Z724 196 aa8.55□□□□□ -1.04
Knl1-201ENSMUST00000028799 Gm21887J3QQ04 176 aa8.55□□□□□ -1.04
Knl1-201ENSMUST00000028799 Igfn1Q3KNY0 2849 aa8.51□□□□□ -1.05
Knl1-201ENSMUST00000028799 Tenm4Q3UHK6 2771 aa8.49□□□□□ -1.05
Knl1-201ENSMUST00000028799 Ndufaf8A2AMZ4 74 aa8.46□□□□□ -1.05
Knl1-201ENSMUST00000028799 Wdfy3Q6VNB8 3508 aa8.45□□□□□ -1.06
Knl1-201ENSMUST00000028799 Vps13cQ8BX70 3748 aa8.45□□□□□ -1.06
Knl1-201ENSMUST00000028799 Celsr2Q9R0M0 2920 aa8.42□□□□□ -1.06
Knl1-201ENSMUST00000028799 Pdzd2E9Q1M1 2796 aa8.39□□□□□ -1.07
Knl1-201ENSMUST00000028799 Gm17416Q30KP4 66 aa8.36□□□□□ -1.07
Knl1-201ENSMUST00000028799 Dchs2A0A0A6YW72 3346 aa8.35□□□□□ -1.07
Knl1-201ENSMUST00000028799 B930094E09RikQ8C4T2 136 aa8.34□□□□□ -1.07
Knl1-201ENSMUST00000028799 Chd9Q8BYH8 2885 aa8.32□□□□□ -1.08
Knl1-201ENSMUST00000028799 Col6a3E9PWQ3 3284 aa8.31□□□□□ -1.08
Knl1-201ENSMUST00000028799 VcanQ62059 3357 aa8.31□□□□□ -1.08
Knl1-201ENSMUST00000028799 Tnp1P10856 55 aa8.3□□□□□ -1.08
Knl1-201ENSMUST00000028799 RelnQ60841 3461 aa8.27□□□□□ -1.09
Knl1-201ENSMUST00000028799 Nf1Q04690 2841 aa8.26□□□□□ -1.09
Knl1-201ENSMUST00000028799 2310057N15RikQ9D6T8 200 aa8.26□□□□□ -1.09
Knl1-201ENSMUST00000028799 DmdP11531 3678 aa8.18□□□□□ -1.1
Knl1-201ENSMUST00000028799 2210017I01RikA0A0A6YVV1 95 aa8.17□□□□□ -1.1
Knl1-201ENSMUST00000028799 Myo15aQ9QZZ4 3511 aa8.16□□□□□ -1.1
Knl1-201ENSMUST00000028799 Gm17402F6Z0L5 76 aa8.15□□□□□ -1.11
Knl1-201ENSMUST00000028799 Akap9Q70FJ1 3797 aa8.15□□□□□ -1.11
Knl1-201ENSMUST00000028799 Dchs1E9PVD3 3291 aa8.14□□□□□ -1.11
Knl1-201ENSMUST00000028799 LrbaQ9ESE1 2856 aa8.1□□□□□ -1.11
Knl1-201ENSMUST00000028799 Gm9112A2AI92 75 aa8.09□□□□□ -1.11
Knl1-201ENSMUST00000028799 SpegQ62407 3262 aa8.09□□□□□ -1.11
Knl1-201ENSMUST00000028799 OtogO55225 2910 aa8.07□□□□□ -1.12
Knl1-201ENSMUST00000028799 Gm11939A2A592 99 aa8.03□□□□□ -1.12
Knl1-201ENSMUST00000028799 Helz2E9QAM5 2947 aaKnown RBP8.02□□□□□ -1.13
Knl1-201ENSMUST00000028799 Gm9736A0A1W2P7N1 277 aa8□□□□□ -1.13
Knl1-201ENSMUST00000028799 Gm9918Q8BUR5 174 aa7.92□□□□□ -1.14
Knl1-201ENSMUST00000028799 Ank2Q8C8R3 3898 aa7.92□□□□□ -1.14
Knl1-201ENSMUST00000028799 Krtap3-2Q9D638 99 aa7.9□□□□□ -1.14
Knl1-201ENSMUST00000028799 Krtap3-3Q9D7P0 99 aa7.9□□□□□ -1.14
Knl1-201ENSMUST00000028799 Csmd1Q923L3 3564 aa7.9□□□□□ -1.15
Knl1-201ENSMUST00000028799 Muc5acE9QAQ8 3455 aa7.86□□□□□ -1.15
Knl1-201ENSMUST00000028799 Tenm2Q9WTS5 2764 aa7.86□□□□□ -1.15
Knl1-201ENSMUST00000028799 Tenm1Q9WTS4 2731 aa7.83□□□□□ -1.16
Knl1-201ENSMUST00000028799 Zfhx4Q9JJN2 3550 aa7.8□□□□□ -1.16
Knl1-201ENSMUST00000028799 Lama5Q61001 3718 aa7.78□□□□□ -1.16
Knl1-201ENSMUST00000028799 Smg1Q8BKX6 3658 aaKnown RBP7.78□□□□□ -1.16
Knl1-201ENSMUST00000028799 Krtap19-5O08632 62 aa7.77□□□□□ -1.16
Knl1-201ENSMUST00000028799 Gm884A2A9H6 3643 aa7.77□□□□□ -1.16
Knl1-201ENSMUST00000028799 Fbn1Q61554 2873 aaKnown RBP7.77□□□□□ -1.17
Knl1-201ENSMUST00000028799 Krtap3-1A2A591 98 aa7.69□□□□□ -1.18
Knl1-201ENSMUST00000028799 Krtap13-1Q8K198 168 aa7.67□□□□□ -1.18
Knl1-201ENSMUST00000028799 SpenQ62504 3644 aaKnown RBP7.65□□□□□ -1.19
Knl1-201ENSMUST00000028799 Gm19668J3QMD1 248 aa7.62□□□□□ -1.19
Knl1-201ENSMUST00000028799 VwfQ8CIZ8 2813 aa7.59□□□□□ -1.2
Knl1-201ENSMUST00000028799 Prm2P07978 107 aa7.53□□□□□ -1.2
Knl1-201ENSMUST00000028799 Dnah14A0A140LIJ4 4489 aa7.42□□□□□ -1.22
Knl1-201ENSMUST00000028799 Huwe1Q7TMY8 4377 aaKnown RBP7.39□□□□□ -1.23
Knl1-201ENSMUST00000028799 Svep1A2AVA0 3567 aa7.39□□□□□ -1.23
Knl1-201ENSMUST00000028799 Cmya5Q70KF4 3739 aa7.38□□□□□ -1.23
Knl1-201ENSMUST00000028799 Gm10318A0A1W2P728 225 aa7.33□□□□□ -1.24
Knl1-201ENSMUST00000028799 Megf8P60882 2789 aa7.33□□□□□ -1.24
Knl1-201ENSMUST00000028799 Dnah17Q69Z23 4481 aa7.3□□□□□ -1.24
Knl1-201ENSMUST00000028799 4933428G20RikQ9D3X4 101 aa7.28□□□□□ -1.24
Knl1-201ENSMUST00000028799 Crct1Q6PAI5 102 aa7.24□□□□□ -1.25
Knl1-201ENSMUST00000028799 Krtap1-5A2A590 122 aa7.23□□□□□ -1.25
Knl1-201ENSMUST00000028799 Sprr2a3Q4KL71 83 aa7.16□□□□□ -1.26
Knl1-201ENSMUST00000028799 Sprr2a1Q9CQK8 83 aa7.16□□□□□ -1.26
Knl1-201ENSMUST00000028799 LystP97412 3788 aa7.15□□□□□ -1.26
Knl1-201ENSMUST00000028799 Vps13dB1ART2 4390 aa7.15□□□□□ -1.27
Knl1-201ENSMUST00000028799 Dnah5Q8VHE6 4621 aa7.14□□□□□ -1.27
Knl1-201ENSMUST00000028799 Dnah10D3YYQ8 4591 aa7.14□□□□□ -1.27
Knl1-201ENSMUST00000028799 Stard9Q80TF6 4561 aa7.06□□□□□ -1.28
Knl1-201ENSMUST00000028799 Muc6Q80T03 2850 aa7.06□□□□□ -1.28
Knl1-201ENSMUST00000028799 Col7a1Q63870 2944 aa7.04□□□□□ -1.28
Knl1-201ENSMUST00000028799 Krtap7-1Q9D3I6 87 aa7.02□□□□□ -1.29
Knl1-201ENSMUST00000028799 PlecQ9QXS1 4691 aaKnown RBP7□□□□□ -1.29
Knl1-201ENSMUST00000028799 Csmd2V9GX34 3611 aa6.96□□□□□ -1.29
Knl1-201ENSMUST00000028799 Muc4Q8JZM8 3443 aa6.96□□□□□ -1.3
Knl1-201ENSMUST00000028799 Dync2h1Q45VK7 4306 aa6.94□□□□□ -1.3
Knl1-201ENSMUST00000028799 Krtap19-9aF8WH65 55 aa6.92□□□□□ -1.3
Knl1-201ENSMUST00000028799 Krtap1-4Q3V2D6 188 aa6.91□□□□□ -1.3
Knl1-201ENSMUST00000028799 Dnah3Q8BW94 4083 aa6.89□□□□□ -1.31
Knl1-201ENSMUST00000028799 Dnah11E9Q7N9 4488 aa6.88□□□□□ -1.31
Knl1-201ENSMUST00000028799 Dnah2P0C6F1 4456 aa6.87□□□□□ -1.31
Knl1-201ENSMUST00000028799 Dnah1E9Q8T7 4250 aa6.84□□□□□ -1.31
Knl1-201ENSMUST00000028799 BsnO88737 3942 aa6.83□□□□□ -1.32
Knl1-201ENSMUST00000028799 Xirp2Q4U4S6 3784 aa6.8□□□□□ -1.32
Knl1-201ENSMUST00000028799 TnxbO35452 4006 aa6.8□□□□□ -1.32
Knl1-201ENSMUST00000028799 Dnah9B1AR51 4484 aa6.78□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 136.5 ms