RNA–Protein interactions for RNA: ENSMUST00000028752.7

Vps39-201, Transcript of Vam6/Vps39-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps39, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39-201ENSMUST00000028752 Srrm2Q8BTI8 2703 aaKnown RBP5.58□□□□□ -1.52
Vps39-201ENSMUST00000028752 9530053A07RikE9PVG8 2581 aa5.57□□□□□ -1.52
Vps39-201ENSMUST00000028752 Pdzd2E9Q1M1 2796 aa5.56□□□□□ -1.52
Vps39-201ENSMUST00000028752 Smg1Q8BKX6 3658 aaKnown RBP5.52□□□□□ -1.53
Vps39-201ENSMUST00000028752 Itpr2Q9Z329 2701 aa5.52□□□□□ -1.53
Vps39-201ENSMUST00000028752 Tenm3Q9WTS6 2715 aa5.52□□□□□ -1.53
Vps39-201ENSMUST00000028752 Lama5Q61001 3718 aa5.52□□□□□ -1.53
Vps39-201ENSMUST00000028752 Svep1A2AVA0 3567 aa5.48□□□□□ -1.53
Vps39-201ENSMUST00000028752 Romo1P60603 79 aa5.46□□□□□ -1.54
Vps39-201ENSMUST00000028752 Gm36176A0A1W2P8D5 158 aa5.46□□□□□ -1.54
Vps39-201ENSMUST00000028752 Defb11Q8R2I7 77 aa5.45□□□□□ -1.54
Vps39-201ENSMUST00000028752 Muc4Q8JZM8 3443 aa5.44□□□□□ -1.54
Vps39-201ENSMUST00000028752 Krtap29-1A2A5X4 342 aa5.44□□□□□ -1.54
Vps39-201ENSMUST00000028752 Rpl37Q9D823 97 aa5.44□□□□□ -1.54
Vps39-201ENSMUST00000028752 Krtap13O88375 197 aa5.43□□□□□ -1.54
Vps39-201ENSMUST00000028752 2310050C09RikG5E8Z3 280 aa5.43□□□□□ -1.54
Vps39-201ENSMUST00000028752 Gm10382Q3V0T5 144 aa5.41□□□□□ -1.54
Vps39-201ENSMUST00000028752 2310061N02RikQ9D6S9 174 aa5.39□□□□□ -1.55
Vps39-201ENSMUST00000028752 Krtap14O08640 167 aa5.39□□□□□ -1.55
Vps39-201ENSMUST00000028752 Cmya5Q70KF4 3739 aa5.39□□□□□ -1.55
Vps39-201ENSMUST00000028752 D6Ertd527eA0A0N4SWI3 464 aa5.34□□□□□ -1.55
Vps39-201ENSMUST00000028752 Gm17349F7BGH6 99 aa5.34□□□□□ -1.55
Vps39-201ENSMUST00000028752 FcgbpE9Q0B5 2583 aa5.33□□□□□ -1.56
Vps39-201ENSMUST00000028752 Csmd2V9GX34 3611 aa5.32□□□□□ -1.56
Vps39-201ENSMUST00000028752 Cox6b2Q80ZN9 88 aa5.32□□□□□ -1.56
Vps39-201ENSMUST00000028752 Ndufaf8A2AMZ4 74 aa5.29□□□□□ -1.56
Vps39-201ENSMUST00000028752 Tnp2P11378 117 aa5.27□□□□□ -1.57
Vps39-201ENSMUST00000028752 Krtap15-1Q9QZU5 150 aa5.25□□□□□ -1.57
Vps39-201ENSMUST00000028752 OtogO55225 2910 aa5.24□□□□□ -1.57
Vps39-201ENSMUST00000028752 Gm9507D3Z5T3 223 aa5.24□□□□□ -1.57
Vps39-201ENSMUST00000028752 Gm20537G3UYK7 97 aa5.24□□□□□ -1.57
Vps39-201ENSMUST00000028752 Krtap10-4Q08EG8 221 aa5.19□□□□□ -1.58
Vps39-201ENSMUST00000028752 Gm5767A0A0J9YTU8 78 aa5.19□□□□□ -1.58
Vps39-201ENSMUST00000028752 Gm19426M0QWC7 77 aa5.19□□□□□ -1.58
Vps39-201ENSMUST00000028752 Fam229aB2KGE5 128 aa5.18□□□□□ -1.58
Vps39-201ENSMUST00000028752 Spink7Q6IE32 76 aa5.18□□□□□ -1.58
Vps39-201ENSMUST00000028752 Tenm1Q9WTS4 2731 aa5.16□□□□□ -1.58
Vps39-201ENSMUST00000028752 2310079G19RikQ9D6L6 185 aa5.16□□□□□ -1.58
Vps39-201ENSMUST00000028752 Fbn1Q61554 2873 aaKnown RBP5.12□□□□□ -1.59
Vps39-201ENSMUST00000028752 VwfQ8CIZ8 2813 aa5.1□□□□□ -1.59
Vps39-201ENSMUST00000028752 BC029722A0A0N4SW31 51 aa5.1□□□□□ -1.59
Vps39-201ENSMUST00000028752 Krtap10-10A0A1W2P7T6 217 aa5.08□□□□□ -1.6
Vps39-201ENSMUST00000028752 Rps29P62274 56 aa5.08□□□□□ -1.6
Vps39-201ENSMUST00000028752 A930033H14RikG5E8X6 103 aa5.08□□□□□ -1.6
Vps39-201ENSMUST00000028752 Prm2P07978 107 aa5.07□□□□□ -1.6
Vps39-201ENSMUST00000028752 Tenm4Q3UHK6 2771 aa5.07□□□□□ -1.6
Vps39-201ENSMUST00000028752 Gm9112A2AI92 75 aa5.06□□□□□ -1.6
Vps39-201ENSMUST00000028752 Camk2n1Q6QWF9 78 aa5.06□□□□□ -1.6
Vps39-201ENSMUST00000028752 Megf8P60882 2789 aa4.98□□□□□ -1.61
Vps39-201ENSMUST00000028752 LystP97412 3788 aa4.97□□□□□ -1.61
Vps39-201ENSMUST00000028752 Gm2696A0A1W2P709 240 aa4.95□□□□□ -1.62
Vps39-201ENSMUST00000028752 CubnQ9JLB4 3623 aa4.95□□□□□ -1.62
Vps39-201ENSMUST00000028752 Gm21887J3QQ04 176 aa4.91□□□□□ -1.62
Vps39-201ENSMUST00000028752 Gm40193A0A1B0GT39 78 aa4.91□□□□□ -1.62
Vps39-201ENSMUST00000028752 Col7a1Q63870 2944 aa4.9□□□□□ -1.62
Vps39-201ENSMUST00000028752 Gm5965D3Z724 196 aa4.89□□□□□ -1.63
Vps39-201ENSMUST00000028752 Hspg2Q05793 3707 aaKnown RBP4.86□□□□□ -1.63
Vps39-201ENSMUST00000028752 Tenm2Q9WTS5 2764 aa4.86□□□□□ -1.63
Vps39-201ENSMUST00000028752 B930094E09RikQ8C4T2 136 aa4.86□□□□□ -1.63
Vps39-201ENSMUST00000028752 Sec61bQ9CQS8 96 aaKnown RBP4.84□□□□□ -1.63
Vps39-201ENSMUST00000028752 Gm11939A2A592 99 aa4.82□□□□□ -1.64
Vps39-201ENSMUST00000028752 Krtap3-2Q9D638 99 aa4.79□□□□□ -1.64
Vps39-201ENSMUST00000028752 Krtap3-3Q9D7P0 99 aa4.79□□□□□ -1.64
Vps39-201ENSMUST00000028752 Xirp2Q4U4S6 3784 aa4.77□□□□□ -1.65
Vps39-201ENSMUST00000028752 Muc6Q80T03 2850 aa4.76□□□□□ -1.65
Vps39-201ENSMUST00000028752 2310057N15RikQ9D6T8 200 aa4.73□□□□□ -1.65
Vps39-201ENSMUST00000028752 Ank2Q8C8R3 3898 aa4.7□□□□□ -1.66
Vps39-201ENSMUST00000028752 Gm17416Q30KP4 66 aa4.68□□□□□ -1.66
Vps39-201ENSMUST00000028752 BsnO88737 3942 aa4.67□□□□□ -1.66
Vps39-201ENSMUST00000028752 Tnp1P10856 55 aa4.67□□□□□ -1.66
Vps39-201ENSMUST00000028752 2210017I01RikA0A0A6YVV1 95 aa4.64□□□□□ -1.67
Vps39-201ENSMUST00000028752 Gm9736A0A1W2P7N1 277 aa4.59□□□□□ -1.68
Vps39-201ENSMUST00000028752 Gm17402F6Z0L5 76 aa4.57□□□□□ -1.68
Vps39-201ENSMUST00000028752 Gm9918Q8BUR5 174 aa4.55□□□□□ -1.68
Vps39-201ENSMUST00000028752 Csmd3Q80T79 3707 aa4.54□□□□□ -1.68
Vps39-201ENSMUST00000028752 Krtap3-1A2A591 98 aa4.53□□□□□ -1.69
Vps39-201ENSMUST00000028752 Dnah14A0A140LIJ4 4489 aa4.49□□□□□ -1.69
Vps39-201ENSMUST00000028752 Krtap7-1Q9D3I6 87 aa4.43□□□□□ -1.7
Vps39-201ENSMUST00000028752 Dnah10D3YYQ8 4591 aa4.42□□□□□ -1.7
Vps39-201ENSMUST00000028752 Krtap13-1Q8K198 168 aa4.41□□□□□ -1.7
Vps39-201ENSMUST00000028752 Dnah7bL7N1Y0 4068 aa4.32□□□□□ -1.72
Vps39-201ENSMUST00000028752 Krtap19-5O08632 62 aa4.32□□□□□ -1.72
Vps39-201ENSMUST00000028752 Dnah17Q69Z23 4481 aa4.31□□□□□ -1.72
Vps39-201ENSMUST00000028752 Dnah11E9Q7N9 4488 aa4.31□□□□□ -1.72
Vps39-201ENSMUST00000028752 Gm10318A0A1W2P728 225 aa4.29□□□□□ -1.72
Vps39-201ENSMUST00000028752 Gm19668J3QMD1 248 aa4.29□□□□□ -1.72
Vps39-201ENSMUST00000028752 Huwe1Q7TMY8 4377 aaKnown RBP4.29□□□□□ -1.72
Vps39-201ENSMUST00000028752 Dnah5Q8VHE6 4621 aa4.27□□□□□ -1.73
Vps39-201ENSMUST00000028752 Fras1Q80T14 4010 aa4.25□□□□□ -1.73
Vps39-201ENSMUST00000028752 PlecQ9QXS1 4691 aaKnown RBP4.2□□□□□ -1.74
Vps39-201ENSMUST00000028752 Dnah9B1AR51 4484 aa4.18□□□□□ -1.74
Vps39-201ENSMUST00000028752 Sprr2a3Q4KL71 83 aa4.17□□□□□ -1.74
Vps39-201ENSMUST00000028752 Sprr2a1Q9CQK8 83 aa4.17□□□□□ -1.74
Vps39-201ENSMUST00000028752 Gm19402J3QJV4 266 aa4.17□□□□□ -1.74
Vps39-201ENSMUST00000028752 Vps13dB1ART2 4390 aa4.16□□□□□ -1.74
Vps39-201ENSMUST00000028752 Crct1Q6PAI5 102 aa4.16□□□□□ -1.74
Vps39-201ENSMUST00000028752 Stard9Q80TF6 4561 aa4.14□□□□□ -1.75
Vps39-201ENSMUST00000028752 ApobE9Q414 4505 aa4.12□□□□□ -1.75
Vps39-201ENSMUST00000028752 Lrp1bQ9JI18 4599 aa4.12□□□□□ -1.75
Vps39-201ENSMUST00000028752 Dnah3Q8BW94 4083 aa4.08□□□□□ -1.76
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms