RNA–Protein interactions for RNA: ENSMUST00000026072.3

Trub1-201, Transcript of Probable tRNA pseudouridine synthase 1, mousemouse

TSL 1 (best) BASIC

Gene Trub1, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1-201ENSMUST00000026072 Xirp2Q4U4S6 3784 aa5.05□□□□□ -1.6
Trub1-201ENSMUST00000026072 Gm17349F7BGH6 99 aa5.05□□□□□ -1.6
Trub1-201ENSMUST00000026072 Svep1A2AVA0 3567 aa5.04□□□□□ -1.6
Trub1-201ENSMUST00000026072 A730071L15RikQ8C4X0 137 aa5.04□□□□□ -1.6
Trub1-201ENSMUST00000026072 Tenm1Q9WTS4 2731 aa5.04□□□□□ -1.6
Trub1-201ENSMUST00000026072 CriptO70333 101 aa5.03□□□□□ -1.6
Trub1-201ENSMUST00000026072 Spink7Q6IE32 76 aa5.03□□□□□ -1.6
Trub1-201ENSMUST00000026072 Gm9821Q8K076 103 aa5.02□□□□□ -1.61
Trub1-201ENSMUST00000026072 OtogO55225 2910 aa5.02□□□□□ -1.61
Trub1-201ENSMUST00000026072 Gm4491E0CX42 125 aa5.01□□□□□ -1.61
Trub1-201ENSMUST00000026072 Odf3bQ5M8M2 238 aa5.01□□□□□ -1.61
Trub1-201ENSMUST00000026072 Gm10139O88245 57 aa5.01□□□□□ -1.61
Trub1-201ENSMUST00000026072 Sprr1aQ62266 144 aa5.01□□□□□ -1.61
Trub1-201ENSMUST00000026072 Pla2g10Q9QXX3 151 aa5.01□□□□□ -1.61
Trub1-201ENSMUST00000026072 Krtap15-1Q9QZU5 150 aa5□□□□□ -1.61
Trub1-201ENSMUST00000026072 Ank2Q8C8R3 3898 aa4.96□□□□□ -1.62
Trub1-201ENSMUST00000026072 Gm9955Q8CEJ8 102 aa4.95□□□□□ -1.62
Trub1-201ENSMUST00000026072 Krtap13O88375 197 aa4.95□□□□□ -1.62
Trub1-201ENSMUST00000026072 Gm37013Q8K491 104 aa4.94□□□□□ -1.62
Trub1-201ENSMUST00000026072 Gm16253D3Z167 63 aa4.94□□□□□ -1.62
Trub1-201ENSMUST00000026072 Gm9507D3Z5T3 223 aa4.92□□□□□ -1.62
Trub1-201ENSMUST00000026072 CubnQ9JLB4 3623 aa4.91□□□□□ -1.62
Trub1-201ENSMUST00000026072 Krtap10-4Q08EG8 221 aa4.91□□□□□ -1.62
Trub1-201ENSMUST00000026072 Gm20538F6Z9R1 75 aa4.9□□□□□ -1.62
Trub1-201ENSMUST00000026072 Gm3646F6S692 53 aa4.88□□□□□ -1.63
Trub1-201ENSMUST00000026072 2310050C09RikG5E8Z3 280 aa4.87□□□□□ -1.63
Trub1-201ENSMUST00000026072 Csmd3Q80T79 3707 aa4.86□□□□□ -1.63
Trub1-201ENSMUST00000026072 Col7a1Q63870 2944 aa4.86□□□□□ -1.63
Trub1-201ENSMUST00000026072 Krtap10-10A0A1W2P7T6 217 aa4.83□□□□□ -1.64
Trub1-201ENSMUST00000026072 Krtap29-1A2A5X4 342 aa4.81□□□□□ -1.64
Trub1-201ENSMUST00000026072 Fam229aB2KGE5 128 aa4.8□□□□□ -1.64
Trub1-201ENSMUST00000026072 VwfQ8CIZ8 2813 aa4.79□□□□□ -1.64
Trub1-201ENSMUST00000026072 Rpl37Q9D823 97 aa4.79□□□□□ -1.64
Trub1-201ENSMUST00000026072 Megf8P60882 2789 aa4.79□□□□□ -1.64
Trub1-201ENSMUST00000026072 Krtap14O08640 167 aa4.78□□□□□ -1.64
Trub1-201ENSMUST00000026072 Camk2n1Q6QWF9 78 aa4.78□□□□□ -1.64
Trub1-201ENSMUST00000026072 Gm5767A0A0J9YTU8 78 aa4.78□□□□□ -1.64
Trub1-201ENSMUST00000026072 2310061N02RikQ9D6S9 174 aa4.78□□□□□ -1.64
Trub1-201ENSMUST00000026072 Fbn1Q61554 2873 aaKnown RBP4.77□□□□□ -1.65
Trub1-201ENSMUST00000026072 BsnO88737 3942 aa4.77□□□□□ -1.65
Trub1-201ENSMUST00000026072 Tenm2Q9WTS5 2764 aa4.75□□□□□ -1.65
Trub1-201ENSMUST00000026072 Sec61bQ9CQS8 96 aaKnown RBP4.74□□□□□ -1.65
Trub1-201ENSMUST00000026072 1700042G07RikB1AUF7 90 aa4.73□□□□□ -1.65
Trub1-201ENSMUST00000026072 Gm10382Q3V0T5 144 aa4.72□□□□□ -1.65
Trub1-201ENSMUST00000026072 BC029722A0A0N4SW31 51 aa4.72□□□□□ -1.65
Trub1-201ENSMUST00000026072 4933415A04RikQ9D443 101 aa4.72□□□□□ -1.65
Trub1-201ENSMUST00000026072 Romo1P60603 79 aa4.7□□□□□ -1.66
Trub1-201ENSMUST00000026072 Gm19426M0QWC7 77 aa4.69□□□□□ -1.66
Trub1-201ENSMUST00000026072 Gm2310J3QNJ2 377 aa4.69□□□□□ -1.66
Trub1-201ENSMUST00000026072 Gm2696A0A1W2P709 240 aa4.68□□□□□ -1.66
Trub1-201ENSMUST00000026072 Tnp2P11378 117 aa4.62□□□□□ -1.67
Trub1-201ENSMUST00000026072 Cox6b2Q80ZN9 88 aa4.61□□□□□ -1.67
Trub1-201ENSMUST00000026072 Muc6Q80T03 2850 aa4.57□□□□□ -1.68
Trub1-201ENSMUST00000026072 D6Ertd527eA0A0N4SWI3 464 aa4.56□□□□□ -1.68
Trub1-201ENSMUST00000026072 Gm11939A2A592 99 aa4.53□□□□□ -1.69
Trub1-201ENSMUST00000026072 Gm5965D3Z724 196 aa4.52□□□□□ -1.69
Trub1-201ENSMUST00000026072 Rps29P62274 56 aa4.5□□□□□ -1.69
Trub1-201ENSMUST00000026072 Kmt2aP55200 3966 aa4.49□□□□□ -1.69
Trub1-201ENSMUST00000026072 2310057N15RikQ9D6T8 200 aa4.46□□□□□ -1.69
Trub1-201ENSMUST00000026072 Dnah1E9Q8T7 4250 aa4.43□□□□□ -1.7
Trub1-201ENSMUST00000026072 Ndufaf8A2AMZ4 74 aa4.42□□□□□ -1.7
Trub1-201ENSMUST00000026072 Gm21887J3QQ04 176 aa4.38□□□□□ -1.71
Trub1-201ENSMUST00000026072 Dnah3Q8BW94 4083 aa4.37□□□□□ -1.71
Trub1-201ENSMUST00000026072 Gm20537G3UYK7 97 aa4.33□□□□□ -1.72
Trub1-201ENSMUST00000026072 Dnah7aE9Q0T8 4024 aa4.31□□□□□ -1.72
Trub1-201ENSMUST00000026072 TnxbO35452 4006 aa4.31□□□□□ -1.72
Trub1-201ENSMUST00000026072 Gm9918Q8BUR5 174 aa4.26□□□□□ -1.73
Trub1-201ENSMUST00000026072 Gm9112A2AI92 75 aa4.26□□□□□ -1.73
Trub1-201ENSMUST00000026072 Gm9736A0A1W2P7N1 277 aa4.25□□□□□ -1.73
Trub1-201ENSMUST00000026072 Tnp1P10856 55 aa4.24□□□□□ -1.73
Trub1-201ENSMUST00000026072 Dnah7bL7N1Y0 4068 aa4.23□□□□□ -1.73
Trub1-201ENSMUST00000026072 2310079G19RikQ9D6L6 185 aa4.23□□□□□ -1.73
Trub1-201ENSMUST00000026072 Dnah11E9Q7N9 4488 aa4.2□□□□□ -1.74
Trub1-201ENSMUST00000026072 A930033H14RikG5E8X6 103 aa4.2□□□□□ -1.74
Trub1-201ENSMUST00000026072 B930094E09RikQ8C4T2 136 aa4.2□□□□□ -1.74
Trub1-201ENSMUST00000026072 Krtap3-2Q9D638 99 aa4.19□□□□□ -1.74
Trub1-201ENSMUST00000026072 Krtap3-3Q9D7P0 99 aa4.19□□□□□ -1.74
Trub1-201ENSMUST00000026072 Dnah14A0A140LIJ4 4489 aa4.18□□□□□ -1.74
Trub1-201ENSMUST00000026072 Gm40193A0A1B0GT39 78 aa4.18□□□□□ -1.74
Trub1-201ENSMUST00000026072 Fras1Q80T14 4010 aa4.17□□□□□ -1.74
Trub1-201ENSMUST00000026072 Dync2h1Q45VK7 4306 aa4.15□□□□□ -1.75
Trub1-201ENSMUST00000026072 Dnah7cA0A087WR13 4024 aa4.13□□□□□ -1.75
Trub1-201ENSMUST00000026072 Prm2P07978 107 aa4.12□□□□□ -1.75
Trub1-201ENSMUST00000026072 Vps13bQ80TY5 3993 aa4.12□□□□□ -1.75
Trub1-201ENSMUST00000026072 Dnah9B1AR51 4484 aa4.12□□□□□ -1.75
Trub1-201ENSMUST00000026072 Gm10318A0A1W2P728 225 aa4.11□□□□□ -1.75
Trub1-201ENSMUST00000026072 Gm17416Q30KP4 66 aa4.1□□□□□ -1.75
Trub1-201ENSMUST00000026072 Dnah6E9Q0B6 4144 aa4.09□□□□□ -1.76
Trub1-201ENSMUST00000026072 Pkhd1E9PZ36 4059 aa4.08□□□□□ -1.76
Trub1-201ENSMUST00000026072 Dnah10D3YYQ8 4591 aa4.07□□□□□ -1.76
Trub1-201ENSMUST00000026072 2210017I01RikA0A0A6YVV1 95 aa4.07□□□□□ -1.76
Trub1-201ENSMUST00000026072 Hectd4E9Q2E4 4418 aa4.04□□□□□ -1.76
Trub1-201ENSMUST00000026072 Vps13dB1ART2 4390 aa4.03□□□□□ -1.76
Trub1-201ENSMUST00000026072 PrkdcP97313 4128 aa4.01□□□□□ -1.77
Trub1-201ENSMUST00000026072 Crct1Q6PAI5 102 aa4□□□□□ -1.77
Trub1-201ENSMUST00000026072 Dnah17Q69Z23 4481 aa3.99□□□□□ -1.77
Trub1-201ENSMUST00000026072 Krtap19-5O08632 62 aa3.99□□□□□ -1.77
Trub1-201ENSMUST00000026072 Pkd1O08852 4293 aa3.98□□□□□ -1.77
Trub1-201ENSMUST00000026072 Ryr1E9PZQ0 5035 aa3.97□□□□□ -1.77
Trub1-201ENSMUST00000026072 Huwe1Q7TMY8 4377 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 199.4 ms