RNA–Protein interactions for RNA: ENSMUST00000022623.12

Trim35-201, Transcript of Tripartite motif-containing protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim35, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35-201ENSMUST00000022623 1700074P13RikQ9D9G7 251 aa7.31□□□□□ -1.24
Trim35-201ENSMUST00000022623 Cypt15B1AXS0 87 aa7.31□□□□□ -1.24
Trim35-201ENSMUST00000022623 6030445D17RikE9Q8F9 148 aa7.31□□□□□ -1.24
Trim35-201ENSMUST00000022623 Gm10267M0QWD8 85 aa7.3□□□□□ -1.24
Trim35-201ENSMUST00000022623 Mp68P56379 58 aa7.29□□□□□ -1.24
Trim35-201ENSMUST00000022623 Wfdc3Q14AE4 130 aa7.29□□□□□ -1.24
Trim35-201ENSMUST00000022623 Ndufb1P0DN34 57 aa7.29□□□□□ -1.24
Trim35-201ENSMUST00000022623 A0A286YE49 62 aa7.28□□□□□ -1.24
Trim35-201ENSMUST00000022623 Dnah7bL7N1Y0 4068 aa7.28□□□□□ -1.24
Trim35-201ENSMUST00000022623 Chchd10Q7TNL9 138 aa7.27□□□□□ -1.25
Trim35-201ENSMUST00000022623 Krtap10-10A0A1W2P7T6 217 aa7.26□□□□□ -1.25
Trim35-201ENSMUST00000022623 Gm10065F6TJM2 114 aa7.26□□□□□ -1.25
Trim35-201ENSMUST00000022623 Gm10139O88245 57 aa7.24□□□□□ -1.25
Trim35-201ENSMUST00000022623 Spaca4Q80ZQ0 127 aa7.23□□□□□ -1.25
Trim35-201ENSMUST00000022623 Krtap13O88375 197 aa7.22□□□□□ -1.25
Trim35-201ENSMUST00000022623 Defb13Q8R2I4 64 aa7.22□□□□□ -1.25
Trim35-201ENSMUST00000022623 Odf3bQ5M8M2 238 aa7.22□□□□□ -1.25
Trim35-201ENSMUST00000022623 Csmd3Q80T79 3707 aa7.21□□□□□ -1.26
Trim35-201ENSMUST00000022623 NbdyA0A0N4SUI7 68 aa7.19□□□□□ -1.26
Trim35-201ENSMUST00000022623 RetnlbQ99P86 105 aa7.18□□□□□ -1.26
Trim35-201ENSMUST00000022623 Gm2696A0A1W2P709 240 aa7.17□□□□□ -1.26
Trim35-201ENSMUST00000022623 Gpr15lA0A0B4J1N3 78 aa7.17□□□□□ -1.26
Trim35-201ENSMUST00000022623 Krtap29-1A2A5X4 342 aa7.16□□□□□ -1.26
Trim35-201ENSMUST00000022623 Prm2P07978 107 aa7.15□□□□□ -1.26
Trim35-201ENSMUST00000022623 Gm9918Q8BUR5 174 aa7.15□□□□□ -1.26
Trim35-201ENSMUST00000022623 Q8BGJ3 129 aa7.14□□□□□ -1.27
Trim35-201ENSMUST00000022623 Huwe1Q7TMY8 4377 aaKnown RBP7.14□□□□□ -1.27
Trim35-201ENSMUST00000022623 Limd2Q8BGB5 128 aa7.14□□□□□ -1.27
Trim35-201ENSMUST00000022623 Dnah6E9Q0B6 4144 aa7.14□□□□□ -1.27
Trim35-201ENSMUST00000022623 Gm20661K7N787 53 aa7.12□□□□□ -1.27
Trim35-201ENSMUST00000022623 Krtap14O08640 167 aa7.11□□□□□ -1.27
Trim35-201ENSMUST00000022623 Kmt2aP55200 3966 aa7.09□□□□□ -1.27
Trim35-201ENSMUST00000022623 Dnah17Q69Z23 4481 aa7.08□□□□□ -1.28
Trim35-201ENSMUST00000022623 Chtf8P0CG14 533 aa7.04□□□□□ -1.28
Trim35-201ENSMUST00000022623 Dnah3Q8BW94 4083 aa7.02□□□□□ -1.29
Trim35-201ENSMUST00000022623 Gm37013Q8K491 104 aa7.02□□□□□ -1.29
Trim35-201ENSMUST00000022623 TnxbO35452 4006 aa7□□□□□ -1.29
Trim35-201ENSMUST00000022623 Dnah11E9Q7N9 4488 aa6.98□□□□□ -1.29
Trim35-201ENSMUST00000022623 PrkdcP97313 4128 aa6.97□□□□□ -1.29
Trim35-201ENSMUST00000022623 PlecQ9QXS1 4691 aaKnown RBP6.96□□□□□ -1.29
Trim35-201ENSMUST00000022623 Tnp2P11378 117 aa6.96□□□□□ -1.29
Trim35-201ENSMUST00000022623 Gm21887J3QQ04 176 aa6.96□□□□□ -1.3
Trim35-201ENSMUST00000022623 Gm16253D3Z167 63 aa6.95□□□□□ -1.3
Trim35-201ENSMUST00000022623 Pla2g10Q9QXX3 151 aa6.95□□□□□ -1.3
Trim35-201ENSMUST00000022623 Romo1P60603 79 aa6.94□□□□□ -1.3
Trim35-201ENSMUST00000022623 Uqcr11Q9CPX8 56 aa6.93□□□□□ -1.3
Trim35-201ENSMUST00000022623 Dnah9B1AR51 4484 aa6.93□□□□□ -1.3
Trim35-201ENSMUST00000022623 Gm10999F6Q4M4 69 aa6.91□□□□□ -1.3
Trim35-201ENSMUST00000022623 Fras1Q80T14 4010 aa6.9□□□□□ -1.3
Trim35-201ENSMUST00000022623 Dnah5Q8VHE6 4621 aa6.88□□□□□ -1.31
Trim35-201ENSMUST00000022623 Gm2310J3QNJ2 377 aa6.87□□□□□ -1.31
Trim35-201ENSMUST00000022623 Defb1P56386 69 aa6.83□□□□□ -1.32
Trim35-201ENSMUST00000022623 Dnah1E9Q8T7 4250 aa6.79□□□□□ -1.32
Trim35-201ENSMUST00000022623 Gm21798J3QNU5 87 aa6.77□□□□□ -1.33
Trim35-201ENSMUST00000022623 Stard9Q80TF6 4561 aa6.69□□□□□ -1.34
Trim35-201ENSMUST00000022623 Dnah7cA0A087WR13 4024 aa6.68□□□□□ -1.34
Trim35-201ENSMUST00000022623 Dync2h1Q45VK7 4306 aa6.67□□□□□ -1.34
Trim35-201ENSMUST00000022623 Vps13dB1ART2 4390 aa6.66□□□□□ -1.34
Trim35-201ENSMUST00000022623 Ryr3A2AGL3 4863 aa6.62□□□□□ -1.35
Trim35-201ENSMUST00000022623 Lrp1bQ9JI18 4599 aa6.61□□□□□ -1.35
Trim35-201ENSMUST00000022623 4930507D05RikQ8C9C9 103 aa6.6□□□□□ -1.35
Trim35-201ENSMUST00000022623 Ndufaf8A2AMZ4 74 aa6.6□□□□□ -1.35
Trim35-201ENSMUST00000022623 Dnah7aE9Q0T8 4024 aa6.59□□□□□ -1.35
Trim35-201ENSMUST00000022623 Gm4491E0CX42 125 aa6.58□□□□□ -1.36
Trim35-201ENSMUST00000022623 Krtap15-1Q9QZU5 150 aa6.53□□□□□ -1.36
Trim35-201ENSMUST00000022623 ApobE9Q414 4505 aa6.53□□□□□ -1.36
Trim35-201ENSMUST00000022623 Gm9736A0A1W2P7N1 277 aa6.52□□□□□ -1.37
Trim35-201ENSMUST00000022623 Sec61bQ9CQS8 96 aaKnown RBP6.51□□□□□ -1.37
Trim35-201ENSMUST00000022623 CriptO70333 101 aa6.47□□□□□ -1.37
Trim35-201ENSMUST00000022623 Rnase13Q5GAM7 153 aa6.47□□□□□ -1.37
Trim35-201ENSMUST00000022623 Gm5965D3Z724 196 aa6.46□□□□□ -1.37
Trim35-201ENSMUST00000022623 Hectd4E9Q2E4 4418 aa6.45□□□□□ -1.38
Trim35-201ENSMUST00000022623 Gm5767A0A0J9YTU8 78 aa6.45□□□□□ -1.38
Trim35-201ENSMUST00000022623 Gm3880A0A1B0GSB3 72 aa6.45□□□□□ -1.38
Trim35-201ENSMUST00000022623 Fat1A0A1L1SQU7 4645 aa6.43□□□□□ -1.38
Trim35-201ENSMUST00000022623 Dnah2P0C6F1 4456 aa6.43□□□□□ -1.38
Trim35-201ENSMUST00000022623 Dync1h1Q9JHU4 4644 aaKnown RBP6.41□□□□□ -1.38
Trim35-201ENSMUST00000022623 Lrp1Q91ZX7 4545 aaKnown RBP6.41□□□□□ -1.38
Trim35-201ENSMUST00000022623 Krtap19-5O08632 62 aa6.4□□□□□ -1.39
Trim35-201ENSMUST00000022623 Rps29P62274 56 aa6.4□□□□□ -1.39
Trim35-201ENSMUST00000022623 Pkd1O08852 4293 aa6.38□□□□□ -1.39
Trim35-201ENSMUST00000022623 Gm9112A2AI92 75 aa6.36□□□□□ -1.39
Trim35-201ENSMUST00000022623 Ryr1E9PZQ0 5035 aa6.36□□□□□ -1.39
Trim35-201ENSMUST00000022623 Gm17606F6ZL36 78 aa6.36□□□□□ -1.39
Trim35-201ENSMUST00000022623 Gm11939A2A592 99 aa6.35□□□□□ -1.39
Trim35-201ENSMUST00000022623 D6Ertd527eA0A0N4SWI3 464 aa6.32□□□□□ -1.4
Trim35-201ENSMUST00000022623 2310079G19RikQ9D6L6 185 aa6.3□□□□□ -1.4
Trim35-201ENSMUST00000022623 Krtap3-2Q9D638 99 aa6.27□□□□□ -1.41
Trim35-201ENSMUST00000022623 Krtap3-3Q9D7P0 99 aa6.27□□□□□ -1.41
Trim35-201ENSMUST00000022623 A930033H14RikG5E8X6 103 aa6.23□□□□□ -1.41
Trim35-201ENSMUST00000022623 Fat3Q8BNA6 4555 aa6.22□□□□□ -1.41
Trim35-201ENSMUST00000022623 Gm20537G3UYK7 97 aa6.2□□□□□ -1.42
Trim35-201ENSMUST00000022623 Rpl37Q9D823 97 aa6.2□□□□□ -1.42
Trim35-201ENSMUST00000022623 SacsQ9JLC8 4582 aa6.19□□□□□ -1.42
Trim35-201ENSMUST00000022623 2310057N15RikQ9D6T8 200 aa6.18□□□□□ -1.42
Trim35-201ENSMUST00000022623 Cox6b2Q80ZN9 88 aa6.18□□□□□ -1.42
Trim35-201ENSMUST00000022623 Fat2Q5F226 4351 aa6.17□□□□□ -1.42
Trim35-201ENSMUST00000022623 Mycbp2Q7TPH6 4711 aa6.17□□□□□ -1.42
Trim35-201ENSMUST00000022623 Ryr2E9Q401 4966 aaKnown RBP6.16□□□□□ -1.42
Trim35-201ENSMUST00000022623 Vps13bQ80TY5 3993 aa6.14□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 300.4 ms