RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Gm2310J3QNJ2 377 aa4.71□□□□□ -1.66
Ssr1-201ENSMUST00000021864 VcanQ62059 3357 aa4.69□□□□□ -1.66
Ssr1-201ENSMUST00000021864 Zzef1Q5SSH7 2924 aa4.69□□□□□ -1.66
Ssr1-201ENSMUST00000021864 Brca2P97929 3329 aa4.69□□□□□ -1.66
Ssr1-201ENSMUST00000021864 Trank1Q8BV79 2999 aa4.69□□□□□ -1.66
Ssr1-201ENSMUST00000021864 Nf1Q04690 2841 aa4.69□□□□□ -1.66
Ssr1-201ENSMUST00000021864 Gm2696A0A1W2P709 240 aa4.68□□□□□ -1.66
Ssr1-201ENSMUST00000021864 Krtap14O08640 167 aa4.67□□□□□ -1.66
Ssr1-201ENSMUST00000021864 1700042G07RikB1AUF7 90 aa4.67□□□□□ -1.66
Ssr1-201ENSMUST00000021864 Frem2Q6NVD0 3160 aa4.67□□□□□ -1.66
Ssr1-201ENSMUST00000021864 Gm21887J3QQ04 176 aa4.66□□□□□ -1.66
Ssr1-201ENSMUST00000021864 Tnp1P10856 55 aa4.64□□□□□ -1.67
Ssr1-201ENSMUST00000021864 4933415A04RikQ9D443 101 aa4.64□□□□□ -1.67
Ssr1-201ENSMUST00000021864 LrbaQ9ESE1 2856 aa4.64□□□□□ -1.67
Ssr1-201ENSMUST00000021864 Celsr2Q9R0M0 2920 aa4.63□□□□□ -1.67
Ssr1-201ENSMUST00000021864 TgO08710 2766 aa4.62□□□□□ -1.67
Ssr1-201ENSMUST00000021864 Pdzd2E9Q1M1 2796 aa4.61□□□□□ -1.67
Ssr1-201ENSMUST00000021864 Tenm1Q9WTS4 2731 aa4.6□□□□□ -1.67
Ssr1-201ENSMUST00000021864 Gm40193A0A1B0GT39 78 aa4.59□□□□□ -1.67
Ssr1-201ENSMUST00000021864 Chd9Q8BYH8 2885 aa4.57□□□□□ -1.68
Ssr1-201ENSMUST00000021864 Wdfy3Q6VNB8 3508 aa4.56□□□□□ -1.68
Ssr1-201ENSMUST00000021864 Celsr3Q91ZI0 3301 aa4.54□□□□□ -1.68
Ssr1-201ENSMUST00000021864 D6Ertd527eA0A0N4SWI3 464 aa4.54□□□□□ -1.68
Ssr1-201ENSMUST00000021864 Ndufaf8A2AMZ4 74 aa4.53□□□□□ -1.68
Ssr1-201ENSMUST00000021864 Zfhx3Q61329 3726 aa4.53□□□□□ -1.68
Ssr1-201ENSMUST00000021864 RelnQ60841 3461 aa4.48□□□□□ -1.69
Ssr1-201ENSMUST00000021864 Gm884A2A9H6 3643 aa4.47□□□□□ -1.69
Ssr1-201ENSMUST00000021864 Dchs1E9PVD3 3291 aa4.47□□□□□ -1.69
Ssr1-201ENSMUST00000021864 Akap9Q70FJ1 3797 aa4.46□□□□□ -1.69
Ssr1-201ENSMUST00000021864 Megf8P60882 2789 aa4.46□□□□□ -1.7
Ssr1-201ENSMUST00000021864 SpegQ62407 3262 aa4.46□□□□□ -1.7
Ssr1-201ENSMUST00000021864 Tenm2Q9WTS5 2764 aa4.45□□□□□ -1.7
Ssr1-201ENSMUST00000021864 A930033H14RikG5E8X6 103 aa4.45□□□□□ -1.7
Ssr1-201ENSMUST00000021864 SpenQ62504 3644 aaKnown RBP4.43□□□□□ -1.7
Ssr1-201ENSMUST00000021864 DmdP11531 3678 aa4.43□□□□□ -1.7
Ssr1-201ENSMUST00000021864 Gm9112A2AI92 75 aa4.42□□□□□ -1.7
Ssr1-201ENSMUST00000021864 Gm5965D3Z724 196 aa4.42□□□□□ -1.7
Ssr1-201ENSMUST00000021864 2310057N15RikQ9D6T8 200 aa4.42□□□□□ -1.7
Ssr1-201ENSMUST00000021864 Myo15aQ9QZZ4 3511 aa4.4□□□□□ -1.7
Ssr1-201ENSMUST00000021864 Fbn1Q61554 2873 aaKnown RBP4.4□□□□□ -1.71
Ssr1-201ENSMUST00000021864 Vps13cQ8BX70 3748 aa4.39□□□□□ -1.71
Ssr1-201ENSMUST00000021864 Muc5acE9QAQ8 3455 aa4.38□□□□□ -1.71
Ssr1-201ENSMUST00000021864 Helz2E9QAM5 2947 aaKnown RBP4.36□□□□□ -1.71
Ssr1-201ENSMUST00000021864 Zfhx4Q9JJN2 3550 aa4.34□□□□□ -1.71
Ssr1-201ENSMUST00000021864 B930094E09RikQ8C4T2 136 aa4.33□□□□□ -1.72
Ssr1-201ENSMUST00000021864 OtogO55225 2910 aa4.33□□□□□ -1.72
Ssr1-201ENSMUST00000021864 SmcpP15265 143 aa4.31□□□□□ -1.72
Ssr1-201ENSMUST00000021864 Gm20537G3UYK7 97 aa4.27□□□□□ -1.73
Ssr1-201ENSMUST00000021864 Gm9918Q8BUR5 174 aa4.26□□□□□ -1.73
Ssr1-201ENSMUST00000021864 Csmd1Q923L3 3564 aa4.26□□□□□ -1.73
Ssr1-201ENSMUST00000021864 Lama5Q61001 3718 aa4.25□□□□□ -1.73
Ssr1-201ENSMUST00000021864 Gm17416Q30KP4 66 aa4.23□□□□□ -1.73
Ssr1-201ENSMUST00000021864 Ank2Q8C8R3 3898 aa4.22□□□□□ -1.73
Ssr1-201ENSMUST00000021864 VwfQ8CIZ8 2813 aa4.22□□□□□ -1.73
Ssr1-201ENSMUST00000021864 Gm17402F6Z0L5 76 aa4.21□□□□□ -1.74
Ssr1-201ENSMUST00000021864 Gm9736A0A1W2P7N1 277 aa4.19□□□□□ -1.74
Ssr1-201ENSMUST00000021864 Prm2P07978 107 aa4.18□□□□□ -1.74
Ssr1-201ENSMUST00000021864 Col7a1Q63870 2944 aa4.18□□□□□ -1.74
Ssr1-201ENSMUST00000021864 Krtap19-5O08632 62 aa4.16□□□□□ -1.74
Ssr1-201ENSMUST00000021864 Smg1Q8BKX6 3658 aaKnown RBP4.15□□□□□ -1.74
Ssr1-201ENSMUST00000021864 Muc6Q80T03 2850 aa4.13□□□□□ -1.75
Ssr1-201ENSMUST00000021864 2210017I01RikA0A0A6YVV1 95 aa4.12□□□□□ -1.75
Ssr1-201ENSMUST00000021864 2310079G19RikQ9D6L6 185 aa4.12□□□□□ -1.75
Ssr1-201ENSMUST00000021864 4933428G20RikQ9D3X4 101 aa4.12□□□□□ -1.75
Ssr1-201ENSMUST00000021864 Cmya5Q70KF4 3739 aa4.11□□□□□ -1.75
Ssr1-201ENSMUST00000021864 Gm19668J3QMD1 248 aa4.03□□□□□ -1.76
Ssr1-201ENSMUST00000021864 Muc4Q8JZM8 3443 aa4.01□□□□□ -1.77
Ssr1-201ENSMUST00000021864 Dnah14A0A140LIJ4 4489 aa3.98□□□□□ -1.77
Ssr1-201ENSMUST00000021864 Gm18596A0A1W2P860 280 aa3.97□□□□□ -1.77
Ssr1-201ENSMUST00000021864 Huwe1Q7TMY8 4377 aaKnown RBP3.92□□□□□ -1.78
Ssr1-201ENSMUST00000021864 Svep1A2AVA0 3567 aa3.92□□□□□ -1.78
Ssr1-201ENSMUST00000021864 Crct1Q6PAI5 102 aa3.89□□□□□ -1.79
Ssr1-201ENSMUST00000021864 TnxbO35452 4006 aa3.89□□□□□ -1.79
Ssr1-201ENSMUST00000021864 Gm11939A2A592 99 aa3.88□□□□□ -1.79
Ssr1-201ENSMUST00000021864 BsnO88737 3942 aa3.86□□□□□ -1.79
Ssr1-201ENSMUST00000021864 PlecQ9QXS1 4691 aaKnown RBP3.86□□□□□ -1.79
Ssr1-201ENSMUST00000021864 Gm10318A0A1W2P728 225 aa3.85□□□□□ -1.79
Ssr1-201ENSMUST00000021864 LystP97412 3788 aa3.85□□□□□ -1.79
Ssr1-201ENSMUST00000021864 Stard9Q80TF6 4561 aa3.83□□□□□ -1.8
Ssr1-201ENSMUST00000021864 Krtap13-1Q8K198 168 aa3.83□□□□□ -1.8
Ssr1-201ENSMUST00000021864 Csmd2V9GX34 3611 aa3.82□□□□□ -1.8
Ssr1-201ENSMUST00000021864 Ryr1E9PZQ0 5035 aa3.82□□□□□ -1.8
Ssr1-201ENSMUST00000021864 Dnah5Q8VHE6 4621 aa3.82□□□□□ -1.8
Ssr1-201ENSMUST00000021864 Vps13dB1ART2 4390 aa3.81□□□□□ -1.8
Ssr1-201ENSMUST00000021864 Lce1mQ9CR91 182 aa3.8□□□□□ -1.8
Ssr1-201ENSMUST00000021864 Xirp2Q4U4S6 3784 aa3.8□□□□□ -1.8
Ssr1-201ENSMUST00000021864 Dync1h1Q9JHU4 4644 aaKnown RBP3.75□□□□□ -1.81
Ssr1-201ENSMUST00000021864 CubnQ9JLB4 3623 aa3.74□□□□□ -1.81
Ssr1-201ENSMUST00000021864 Dnah17Q69Z23 4481 aa3.74□□□□□ -1.81
Ssr1-201ENSMUST00000021864 Dnah10D3YYQ8 4591 aa3.73□□□□□ -1.81
Ssr1-201ENSMUST00000021864 Gm6358A0A087WPH4 74 aa3.69□□□□□ -1.82
Ssr1-201ENSMUST00000021864 PrkdcP97313 4128 aa3.68□□□□□ -1.82
Ssr1-201ENSMUST00000021864 Kmt2aP55200 3966 aa3.68□□□□□ -1.82
Ssr1-201ENSMUST00000021864 Dync2h1Q45VK7 4306 aa3.67□□□□□ -1.82
Ssr1-201ENSMUST00000021864 Krtap3-1A2A591 98 aa3.67□□□□□ -1.82
Ssr1-201ENSMUST00000021864 LorP18165 486 aa3.65□□□□□ -1.83
Ssr1-201ENSMUST00000021864 Krtap8-1O08633 61 aa3.64□□□□□ -1.83
Ssr1-201ENSMUST00000021864 Dnah8Q91XQ0 4731 aa3.64□□□□□ -1.83
Ssr1-201ENSMUST00000021864 Sprr2kO70562 68 aa3.63□□□□□ -1.83
Ssr1-201ENSMUST00000021864 Hspg2Q05793 3707 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 22,080 RNA–protein pairs in 68.1 ms