RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Srrm2Q8BTI8 2703 aaKnown RBP4.82□□□□□ -1.64
Lig3-201ENSMUST00000021039 Nf1Q04690 2841 aa4.82□□□□□ -1.64
Lig3-201ENSMUST00000021039 Lama5Q61001 3718 aa4.81□□□□□ -1.64
Lig3-201ENSMUST00000021039 Zfhx3Q61329 3726 aa4.81□□□□□ -1.64
Lig3-201ENSMUST00000021039 Fam229bQ8CF36 80 aa4.8□□□□□ -1.64
Lig3-201ENSMUST00000021039 OtogO55225 2910 aa4.78□□□□□ -1.64
Lig3-201ENSMUST00000021039 Pdzd2E9Q1M1 2796 aa4.77□□□□□ -1.65
Lig3-201ENSMUST00000021039 Krtap10-10A0A1W2P7T6 217 aa4.76□□□□□ -1.65
Lig3-201ENSMUST00000021039 Muc5acE9QAQ8 3455 aa4.75□□□□□ -1.65
Lig3-201ENSMUST00000021039 Krtap14O08640 167 aa4.75□□□□□ -1.65
Lig3-201ENSMUST00000021039 Ank2Q8C8R3 3898 aa4.74□□□□□ -1.65
Lig3-201ENSMUST00000021039 Gm884A2A9H6 3643 aa4.74□□□□□ -1.65
Lig3-201ENSMUST00000021039 HrnrQ8VHD8 2496 aa4.74□□□□□ -1.65
Lig3-201ENSMUST00000021039 Gm16253D3Z167 63 aa4.74□□□□□ -1.65
Lig3-201ENSMUST00000021039 Tnp2P11378 117 aa4.73□□□□□ -1.65
Lig3-201ENSMUST00000021039 Gm2696A0A1W2P709 240 aa4.72□□□□□ -1.65
Lig3-201ENSMUST00000021039 ApcQ61315 2845 aa4.72□□□□□ -1.65
Lig3-201ENSMUST00000021039 Gm5767A0A0J9YTU8 78 aa4.7□□□□□ -1.66
Lig3-201ENSMUST00000021039 BC029722A0A0N4SW31 51 aa4.69□□□□□ -1.66
Lig3-201ENSMUST00000021039 Fbn1Q61554 2873 aaKnown RBP4.68□□□□□ -1.66
Lig3-201ENSMUST00000021039 SpenQ62504 3644 aaKnown RBP4.68□□□□□ -1.66
Lig3-201ENSMUST00000021039 Romo1P60603 79 aa4.66□□□□□ -1.66
Lig3-201ENSMUST00000021039 Rps29P62274 56 aa4.65□□□□□ -1.67
Lig3-201ENSMUST00000021039 Smg1Q8BKX6 3658 aaKnown RBP4.65□□□□□ -1.67
Lig3-201ENSMUST00000021039 A730071L15RikQ8C4X0 137 aa4.65□□□□□ -1.67
Lig3-201ENSMUST00000021039 Gm37013Q8K491 104 aa4.62□□□□□ -1.67
Lig3-201ENSMUST00000021039 Csmd1Q923L3 3564 aa4.62□□□□□ -1.67
Lig3-201ENSMUST00000021039 Gm3646F6S692 53 aa4.62□□□□□ -1.67
Lig3-201ENSMUST00000021039 Rpl37Q9D823 97 aa4.62□□□□□ -1.67
Lig3-201ENSMUST00000021039 Helz2E9QAM5 2947 aaKnown RBP4.6□□□□□ -1.67
Lig3-201ENSMUST00000021039 Tenm1Q9WTS4 2731 aa4.59□□□□□ -1.68
Lig3-201ENSMUST00000021039 Gm10382Q3V0T5 144 aa4.58□□□□□ -1.68
Lig3-201ENSMUST00000021039 TgO08710 2766 aa4.57□□□□□ -1.68
Lig3-201ENSMUST00000021039 D6Ertd527eA0A0N4SWI3 464 aa4.55□□□□□ -1.68
Lig3-201ENSMUST00000021039 Cystm1Q8K353 104 aa4.54□□□□□ -1.68
Lig3-201ENSMUST00000021039 Col7a1Q63870 2944 aa4.51□□□□□ -1.69
Lig3-201ENSMUST00000021039 Tenm2Q9WTS5 2764 aa4.5□□□□□ -1.69
Lig3-201ENSMUST00000021039 Gm9918Q8BUR5 174 aa4.48□□□□□ -1.69
Lig3-201ENSMUST00000021039 Megf8P60882 2789 aa4.47□□□□□ -1.69
Lig3-201ENSMUST00000021039 Svep1A2AVA0 3567 aa4.46□□□□□ -1.7
Lig3-201ENSMUST00000021039 SmcpP15265 143 aa4.45□□□□□ -1.7
Lig3-201ENSMUST00000021039 Gm2310J3QNJ2 377 aa4.45□□□□□ -1.7
Lig3-201ENSMUST00000021039 Cmya5Q70KF4 3739 aa4.43□□□□□ -1.7
Lig3-201ENSMUST00000021039 4933415A04RikQ9D443 101 aa4.42□□□□□ -1.7
Lig3-201ENSMUST00000021039 1700042G07RikB1AUF7 90 aa4.42□□□□□ -1.7
Lig3-201ENSMUST00000021039 Cox6b2Q80ZN9 88 aa4.41□□□□□ -1.7
Lig3-201ENSMUST00000021039 Gm5965D3Z724 196 aa4.4□□□□□ -1.71
Lig3-201ENSMUST00000021039 LystP97412 3788 aa4.39□□□□□ -1.71
Lig3-201ENSMUST00000021039 A930033H14RikG5E8X6 103 aa4.39□□□□□ -1.71
Lig3-201ENSMUST00000021039 VwfQ8CIZ8 2813 aa4.37□□□□□ -1.71
Lig3-201ENSMUST00000021039 Gm21887J3QQ04 176 aa4.35□□□□□ -1.71
Lig3-201ENSMUST00000021039 Ndufaf8A2AMZ4 74 aa4.33□□□□□ -1.72
Lig3-201ENSMUST00000021039 Gm9112A2AI92 75 aa4.33□□□□□ -1.72
Lig3-201ENSMUST00000021039 Tnp1P10856 55 aa4.33□□□□□ -1.72
Lig3-201ENSMUST00000021039 Muc6Q80T03 2850 aa4.31□□□□□ -1.72
Lig3-201ENSMUST00000021039 Dnah14A0A140LIJ4 4489 aa4.3□□□□□ -1.72
Lig3-201ENSMUST00000021039 Csmd2V9GX34 3611 aa4.28□□□□□ -1.72
Lig3-201ENSMUST00000021039 Huwe1Q7TMY8 4377 aaKnown RBP4.27□□□□□ -1.73
Lig3-201ENSMUST00000021039 Krtap19-5O08632 62 aa4.27□□□□□ -1.73
Lig3-201ENSMUST00000021039 2310057N15RikQ9D6T8 200 aa4.27□□□□□ -1.73
Lig3-201ENSMUST00000021039 BsnO88737 3942 aa4.26□□□□□ -1.73
Lig3-201ENSMUST00000021039 Gm9736A0A1W2P7N1 277 aa4.25□□□□□ -1.73
Lig3-201ENSMUST00000021039 Muc4Q8JZM8 3443 aa4.23□□□□□ -1.73
Lig3-201ENSMUST00000021039 4933428G20RikQ9D3X4 101 aa4.23□□□□□ -1.73
Lig3-201ENSMUST00000021039 TnxbO35452 4006 aa4.22□□□□□ -1.73
Lig3-201ENSMUST00000021039 Gm40193A0A1B0GT39 78 aa4.2□□□□□ -1.74
Lig3-201ENSMUST00000021039 Dnah17Q69Z23 4481 aa4.13□□□□□ -1.75
Lig3-201ENSMUST00000021039 Gm17416Q30KP4 66 aa4.12□□□□□ -1.75
Lig3-201ENSMUST00000021039 Xirp2Q4U4S6 3784 aa4.1□□□□□ -1.75
Lig3-201ENSMUST00000021039 CubnQ9JLB4 3623 aa4.08□□□□□ -1.76
Lig3-201ENSMUST00000021039 Gm11939A2A592 99 aa4.06□□□□□ -1.76
Lig3-201ENSMUST00000021039 Vps13dB1ART2 4390 aa4.06□□□□□ -1.76
Lig3-201ENSMUST00000021039 PlecQ9QXS1 4691 aaKnown RBP4.03□□□□□ -1.76
Lig3-201ENSMUST00000021039 Dync2h1Q45VK7 4306 aa4.02□□□□□ -1.77
Lig3-201ENSMUST00000021039 Prm2P07978 107 aa4.01□□□□□ -1.77
Lig3-201ENSMUST00000021039 2210017I01RikA0A0A6YVV1 95 aa4□□□□□ -1.77
Lig3-201ENSMUST00000021039 Dnah5Q8VHE6 4621 aa4□□□□□ -1.77
Lig3-201ENSMUST00000021039 2310079G19RikQ9D6L6 185 aa4□□□□□ -1.77
Lig3-201ENSMUST00000021039 PrkdcP97313 4128 aa4□□□□□ -1.77
Lig3-201ENSMUST00000021039 B930094E09RikQ8C4T2 136 aa3.99□□□□□ -1.77
Lig3-201ENSMUST00000021039 Dnah6E9Q0B6 4144 aa3.99□□□□□ -1.77
Lig3-201ENSMUST00000021039 Gm20537G3UYK7 97 aa3.98□□□□□ -1.77
Lig3-201ENSMUST00000021039 Dnah10D3YYQ8 4591 aa3.97□□□□□ -1.77
Lig3-201ENSMUST00000021039 Stard9Q80TF6 4561 aa3.97□□□□□ -1.77
Lig3-201ENSMUST00000021039 Dnah3Q8BW94 4083 aa3.94□□□□□ -1.78
Lig3-201ENSMUST00000021039 Gm18596A0A1W2P860 280 aa3.93□□□□□ -1.78
Lig3-201ENSMUST00000021039 Dync1h1Q9JHU4 4644 aaKnown RBP3.92□□□□□ -1.78
Lig3-201ENSMUST00000021039 Pkd1O08852 4293 aa3.92□□□□□ -1.78
Lig3-201ENSMUST00000021039 Kmt2aP55200 3966 aa3.91□□□□□ -1.78
Lig3-201ENSMUST00000021039 Sprr2kO70562 68 aa3.9□□□□□ -1.78
Lig3-201ENSMUST00000021039 Dnah11E9Q7N9 4488 aa3.9□□□□□ -1.79
Lig3-201ENSMUST00000021039 Dnah9B1AR51 4484 aa3.89□□□□□ -1.79
Lig3-201ENSMUST00000021039 Dnah1E9Q8T7 4250 aa3.88□□□□□ -1.79
Lig3-201ENSMUST00000021039 Crct1Q6PAI5 102 aa3.88□□□□□ -1.79
Lig3-201ENSMUST00000021039 Hspg2Q05793 3707 aaKnown RBP3.87□□□□□ -1.79
Lig3-201ENSMUST00000021039 Krtap3-2Q9D638 99 aa3.86□□□□□ -1.79
Lig3-201ENSMUST00000021039 Krtap3-3Q9D7P0 99 aa3.86□□□□□ -1.79
Lig3-201ENSMUST00000021039 Krtap13-1Q8K198 168 aa3.85□□□□□ -1.79
Lig3-201ENSMUST00000021039 Lce1mQ9CR91 182 aa3.85□□□□□ -1.79
Lig3-201ENSMUST00000021039 Gm10318A0A1W2P728 225 aa3.84□□□□□ -1.79
Retrieved 100 of 22,080 RNA–protein pairs in 85.7 ms