RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Chchd10Q7TNL9 138 aa9.87□□□□□ -0.83
Trim54-201ENSMUST00000013771 4930535I16RikQ9CUI2 172 aa9.87□□□□□ -0.83
Trim54-201ENSMUST00000013771 Gm37013Q8K491 104 aa9.85□□□□□ -0.83
Trim54-201ENSMUST00000013771 Igkv3-4A0A140T8Q4 119 aa9.82□□□□□ -0.84
Trim54-201ENSMUST00000013771 Defa28D3Z1V9 94 aa9.82□□□□□ -0.84
Trim54-201ENSMUST00000013771 Serp2Q6TAW2 65 aa9.8□□□□□ -0.84
Trim54-201ENSMUST00000013771 Prr13Q9CQJ5 137 aa9.8□□□□□ -0.84
Trim54-201ENSMUST00000013771 Defa25Q5G864 92 aa9.79□□□□□ -0.84
Trim54-201ENSMUST00000013771 Gm20604F8WIA3 75 aa9.77□□□□□ -0.85
Trim54-201ENSMUST00000013771 7530416G11RikJ3QJX6 159 aa9.77□□□□□ -0.85
Trim54-201ENSMUST00000013771 Mrpl34Q99N91 92 aa9.77□□□□□ -0.85
Trim54-201ENSMUST00000013771 Cystm1Q8K353 104 aa9.75□□□□□ -0.85
Trim54-201ENSMUST00000013771 Znf706Q9D115 76 aaKnown RBP9.75□□□□□ -0.85
Trim54-201ENSMUST00000013771 ZanO88799 5376 aa9.75□□□□□ -0.85
Trim54-201ENSMUST00000013771 Igkv3-5A0A140T8M6 119 aa9.74□□□□□ -0.85
Trim54-201ENSMUST00000013771 UqcrqQ9CQ69 82 aa9.74□□□□□ -0.85
Trim54-201ENSMUST00000013771 1700018G05RikA0A1B0GSI2 66 aa9.73□□□□□ -0.85
Trim54-201ENSMUST00000013771 Igkv3-10A0A0G2JGN0 119 aa9.73□□□□□ -0.85
Trim54-201ENSMUST00000013771 4930518I15RikQ3V2W7 57 aa9.73□□□□□ -0.85
Trim54-201ENSMUST00000013771 Odf3bQ5M8M2 238 aa9.73□□□□□ -0.85
Trim54-201ENSMUST00000013771 Apoc4Q61268 124 aa9.73□□□□□ -0.85
Trim54-201ENSMUST00000013771 C130032M10RikQ8C888 123 aa9.73□□□□□ -0.85
Trim54-201ENSMUST00000013771 Gm28539A0A087WSL9 92 aa9.72□□□□□ -0.85
Trim54-201ENSMUST00000013771 Krtap1-3A2A588 173 aa9.72□□□□□ -0.85
Trim54-201ENSMUST00000013771 Pcp4P63054 62 aa9.72□□□□□ -0.85
Trim54-201ENSMUST00000013771 Q8BT88 171 aa9.72□□□□□ -0.85
Trim54-201ENSMUST00000013771 Gm44790A0A0N4SV91 103 aa9.7□□□□□ -0.86
Trim54-201ENSMUST00000013771 Wfdc13Q5DQQ6 81 aa9.7□□□□□ -0.86
Trim54-201ENSMUST00000013771 Gm11562A0PK51 136 aa9.66□□□□□ -0.86
Trim54-201ENSMUST00000013771 Gm21886J3QJU9 214 aa9.65□□□□□ -0.87
Trim54-201ENSMUST00000013771 Fat4Q2PZL6 4981 aa9.64□□□□□ -0.87
Trim54-201ENSMUST00000013771 Igkv8-19A0A0G2JFN8 121 aa9.63□□□□□ -0.87
Trim54-201ENSMUST00000013771 Spaca4Q80ZQ0 127 aa9.61□□□□□ -0.87
Trim54-201ENSMUST00000013771 Fam229bQ8CF36 80 aa9.61□□□□□ -0.87
Trim54-201ENSMUST00000013771 Prr15lQ8JZM2 100 aa9.61□□□□□ -0.87
Trim54-201ENSMUST00000013771 Naa38Q9D2U5 125 aa9.61□□□□□ -0.87
Trim54-201ENSMUST00000013771 Gm5767A0A0J9YTU8 78 aa9.6□□□□□ -0.87
Trim54-201ENSMUST00000013771 Scgb1b2O35176 93 aa9.6□□□□□ -0.87
Trim54-201ENSMUST00000013771 Cypt14J3QPF7 87 aa9.59□□□□□ -0.87
Trim54-201ENSMUST00000013771 Dph3Q8K0W9 82 aa9.59□□□□□ -0.87
Trim54-201ENSMUST00000013771 SmcpP15265 143 aa9.56□□□□□ -0.88
Trim54-201ENSMUST00000013771 Tmem258P61166 79 aa9.56□□□□□ -0.88
Trim54-201ENSMUST00000013771 B230307C23RikQ8BLB2 64 aa9.55□□□□□ -0.88
Trim54-201ENSMUST00000013771 Gm19402J3QJV4 266 aa9.54□□□□□ -0.88
Trim54-201ENSMUST00000013771 Defa21Q8C1P2 93 aa9.54□□□□□ -0.88
Trim54-201ENSMUST00000013771 2310057N15RikQ9D6T8 200 aa9.54□□□□□ -0.88
Trim54-201ENSMUST00000013771 Rps29P62274 56 aa9.52□□□□□ -0.89
Trim54-201ENSMUST00000013771 Gm9821Q8K076 103 aa9.52□□□□□ -0.89
Trim54-201ENSMUST00000013771 Gm19935A0A1B0GSF9 52 aa9.51□□□□□ -0.89
Trim54-201ENSMUST00000013771 Crct1Q6PAI5 102 aa9.51□□□□□ -0.89
Trim54-201ENSMUST00000013771 Samd13D3YUG0 102 aa9.49□□□□□ -0.89
Trim54-201ENSMUST00000013771 Reg3aO09037 175 aa9.49□□□□□ -0.89
Trim54-201ENSMUST00000013771 LorP18165 486 aa9.49□□□□□ -0.89
Trim54-201ENSMUST00000013771 BikO70337 150 aa9.48□□□□□ -0.89
Trim54-201ENSMUST00000013771 Smlr1J3QMJ4 66 aa9.48□□□□□ -0.89
Trim54-201ENSMUST00000013771 Spink8Q09TK9 105 aa9.46□□□□□ -0.9
Trim54-201ENSMUST00000013771 A0A286YE49 62 aa9.45□□□□□ -0.9
Trim54-201ENSMUST00000013771 Gm16253D3Z167 63 aa9.45□□□□□ -0.9
Trim54-201ENSMUST00000013771 Smim20D3Z7Q2 69 aa9.44□□□□□ -0.9
Trim54-201ENSMUST00000013771 Gm2310J3QNJ2 377 aa9.43□□□□□ -0.9
Trim54-201ENSMUST00000013771 Sec61bQ9CQS8 96 aaKnown RBP9.42□□□□□ -0.9
Trim54-201ENSMUST00000013771 Rnf213E9Q555 5152 aaKnown RBP9.42□□□□□ -0.9
Trim54-201ENSMUST00000013771 Rps28P62858 69 aaKnown RBP9.39□□□□□ -0.91
Trim54-201ENSMUST00000013771 Coa6Q8BGD8 79 aa9.37□□□□□ -0.91
Trim54-201ENSMUST00000013771 Igkv3-3A0A140T8Q0 119 aa9.36□□□□□ -0.91
Trim54-201ENSMUST00000013771 Atox1O08997 68 aaKnown RBP9.35□□□□□ -0.91
Trim54-201ENSMUST00000013771 Gm10061D3Z714 54 aa9.33□□□□□ -0.92
Trim54-201ENSMUST00000013771 Krtap15-1Q9QZU5 150 aa9.33□□□□□ -0.92
Trim54-201ENSMUST00000013771 Pet100P0DJE0 76 aa9.31□□□□□ -0.92
Trim54-201ENSMUST00000013771 Krtap4-2B1AQ85 167 aa9.31□□□□□ -0.92
Trim54-201ENSMUST00000013771 Spint4Q9D263 159 aa9.31□□□□□ -0.92
Trim54-201ENSMUST00000013771 1700074P13RikQ9D9G7 251 aa9.28□□□□□ -0.92
Trim54-201ENSMUST00000013771 Serp1Q9Z1W5 66 aa9.25□□□□□ -0.93
Trim54-201ENSMUST00000013771 Gm11569B1AQB1 180 aa9.24□□□□□ -0.93
Trim54-201ENSMUST00000013771 Gm11939A2A592 99 aa9.19□□□□□ -0.94
Trim54-201ENSMUST00000013771 SnurfQ9WU12 71 aa9.19□□□□□ -0.94
Trim54-201ENSMUST00000013771 Cypt15B1AXS0 87 aa9.17□□□□□ -0.94
Trim54-201ENSMUST00000013771 2310034C09RikQ9D746 214 aa9.15□□□□□ -0.94
Trim54-201ENSMUST00000013771 Coa5Q99M07 74 aa9.13□□□□□ -0.95
Trim54-201ENSMUST00000013771 Brk1Q91VR8 75 aa9.12□□□□□ -0.95
Trim54-201ENSMUST00000013771 Cdc42se1Q8BHL7 80 aa9.11□□□□□ -0.95
Trim54-201ENSMUST00000013771 1700042G07RikB1AUF7 90 aa9.1□□□□□ -0.95
Trim54-201ENSMUST00000013771 Gm10267M0QWD8 85 aa9.1□□□□□ -0.95
Trim54-201ENSMUST00000013771 Lce1gQ9D195 139 aa9.1□□□□□ -0.95
Trim54-201ENSMUST00000013771 Krtap19-3Q925H6 87 aa9.09□□□□□ -0.95
Trim54-201ENSMUST00000013771 Gm10318A0A1W2P728 225 aa9.08□□□□□ -0.96
Trim54-201ENSMUST00000013771 Defb13Q8R2I4 64 aa9.07□□□□□ -0.96
Trim54-201ENSMUST00000013771 Chtf8P0CG14 533 aa9.06□□□□□ -0.96
Trim54-201ENSMUST00000013771 Krtap16-3Q8C1I6 86 aa9.05□□□□□ -0.96
Trim54-201ENSMUST00000013771 Gm10160F6Y577 67 aa9.05□□□□□ -0.96
Trim54-201ENSMUST00000013771 H2al1aQ5M8Q2 105 aa9.05□□□□□ -0.96
Trim54-201ENSMUST00000013771 Krtap19-1Q925H2 87 aa9.05□□□□□ -0.96
Trim54-201ENSMUST00000013771 Rpl37Q9D823 97 aa9.05□□□□□ -0.96
Trim54-201ENSMUST00000013771 SvipQ3UZP4 77 aa9.03□□□□□ -0.96
Trim54-201ENSMUST00000013771 Gm10643Q3URG9 111 aa9□□□□□ -0.97
Trim54-201ENSMUST00000013771 Gm26620Q9CY65 116 aa8.98□□□□□ -0.97
Trim54-201ENSMUST00000013771 SspoQ8CG65 4998 aa8.97□□□□□ -0.97
Trim54-201ENSMUST00000013771 Krtap1-4Q3V2D6 188 aa8.97□□□□□ -0.97
Trim54-201ENSMUST00000013771 Syne2Q6ZWQ0 6874 aaKnown RBP8.94□□□□□ -0.98
Trim54-201ENSMUST00000013771 Gm10197F6QEY5 67 aa8.91□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 121.3 ms