RNA–Protein interactions for RNA: ENSMUST00000011895.13

Sptbn4-201, Transcript of Spectrin beta chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Sptbn4, Length 8,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-201ENSMUST00000011895 Gm9508A0A1W2P7W0 230 aa10.22□□□□□ -0.77
Sptbn4-201ENSMUST00000011895 Lama1P19137 3084 aa10.22□□□□□ -0.77
Sptbn4-201ENSMUST00000011895 Celsr1O35161 3034 aa10.21□□□□□ -0.77
Sptbn4-201ENSMUST00000011895 Gm7137J3QMW1 236 aa10.18□□□□□ -0.78
Sptbn4-201ENSMUST00000011895 AspmQ8CJ27 3122 aa10.18□□□□□ -0.78
Sptbn4-201ENSMUST00000011895 HttP42859 3119 aa10.17□□□□□ -0.78
Sptbn4-201ENSMUST00000011895 Frem2Q6NVD0 3160 aa10.14□□□□□ -0.79
Sptbn4-201ENSMUST00000011895 Dmxl2Q8BPN8 3032 aa10.08□□□□□ -0.8
Sptbn4-201ENSMUST00000011895 2310061N02RikQ9D6S9 174 aa10.02□□□□□ -0.8
Sptbn4-201ENSMUST00000011895 Adgrg4B7ZCC9 3073 aa10□□□□□ -0.81
Sptbn4-201ENSMUST00000011895 Cdh23Q99PF4 3354 aa9.99□□□□□ -0.81
Sptbn4-201ENSMUST00000011895 Gm36176A0A1W2P8D5 158 aa9.99□□□□□ -0.81
Sptbn4-201ENSMUST00000011895 Celsr3Q91ZI0 3301 aa9.98□□□□□ -0.81
Sptbn4-201ENSMUST00000011895 Tenm3Q9WTS6 2715 aa9.98□□□□□ -0.81
Sptbn4-201ENSMUST00000011895 Megf8P60882 2789 aa9.86□□□□□ -0.83
Sptbn4-201ENSMUST00000011895 Zfhx3Q61329 3726 aa9.81□□□□□ -0.84
Sptbn4-201ENSMUST00000011895 Gm20537G3UYK7 97 aa9.79□□□□□ -0.84
Sptbn4-201ENSMUST00000011895 Tenm4Q3UHK6 2771 aa9.78□□□□□ -0.84
Sptbn4-201ENSMUST00000011895 Lrrc37aB1AWG4 3215 aa9.75□□□□□ -0.85
Sptbn4-201ENSMUST00000011895 Gm5965D3Z724 196 aa9.75□□□□□ -0.85
Sptbn4-201ENSMUST00000011895 B930094E09RikQ8C4T2 136 aa9.75□□□□□ -0.85
Sptbn4-201ENSMUST00000011895 Prm2P07978 107 aa9.72□□□□□ -0.85
Sptbn4-201ENSMUST00000011895 2310057N15RikQ9D6T8 200 aa9.69□□□□□ -0.86
Sptbn4-201ENSMUST00000011895 Akap9Q70FJ1 3797 aa9.61□□□□□ -0.87
Sptbn4-201ENSMUST00000011895 VwfQ8CIZ8 2813 aa9.59□□□□□ -0.87
Sptbn4-201ENSMUST00000011895 Gm9507D3Z5T3 223 aa9.59□□□□□ -0.87
Sptbn4-201ENSMUST00000011895 Myo15aQ9QZZ4 3511 aa9.59□□□□□ -0.87
Sptbn4-201ENSMUST00000011895 Gm17402F6Z0L5 76 aa9.59□□□□□ -0.87
Sptbn4-201ENSMUST00000011895 Brca2P97929 3329 aa9.57□□□□□ -0.88
Sptbn4-201ENSMUST00000011895 A930033H14RikG5E8X6 103 aa9.55□□□□□ -0.88
Sptbn4-201ENSMUST00000011895 Dchs2A0A0A6YW72 3346 aa9.53□□□□□ -0.88
Sptbn4-201ENSMUST00000011895 Helz2E9QAM5 2947 aaKnown RBP9.53□□□□□ -0.88
Sptbn4-201ENSMUST00000011895 Gm17416Q30KP4 66 aa9.49□□□□□ -0.89
Sptbn4-201ENSMUST00000011895 Vps13cQ8BX70 3748 aa9.48□□□□□ -0.89
Sptbn4-201ENSMUST00000011895 2310079G19RikQ9D6L6 185 aa9.43□□□□□ -0.9
Sptbn4-201ENSMUST00000011895 Krtap10-4Q08EG8 221 aa9.39□□□□□ -0.91
Sptbn4-201ENSMUST00000011895 Szt2A2A9C3 3431 aa9.37□□□□□ -0.91
Sptbn4-201ENSMUST00000011895 OtogO55225 2910 aa9.37□□□□□ -0.91
Sptbn4-201ENSMUST00000011895 Col6a3E9PWQ3 3284 aa9.34□□□□□ -0.91
Sptbn4-201ENSMUST00000011895 SpegQ62407 3262 aa9.31□□□□□ -0.92
Sptbn4-201ENSMUST00000011895 4933428G20RikQ9D3X4 101 aa9.29□□□□□ -0.92
Sptbn4-201ENSMUST00000011895 Tenm2Q9WTS5 2764 aa9.27□□□□□ -0.93
Sptbn4-201ENSMUST00000011895 Krtap10-10A0A1W2P7T6 217 aa9.27□□□□□ -0.93
Sptbn4-201ENSMUST00000011895 VcanQ62059 3357 aa9.27□□□□□ -0.93
Sptbn4-201ENSMUST00000011895 DmdP11531 3678 aa9.26□□□□□ -0.93
Sptbn4-201ENSMUST00000011895 2210017I01RikA0A0A6YVV1 95 aa9.21□□□□□ -0.93
Sptbn4-201ENSMUST00000011895 Ank2Q8C8R3 3898 aa9.2□□□□□ -0.94
Sptbn4-201ENSMUST00000011895 Gm2696A0A1W2P709 240 aa9.12□□□□□ -0.95
Sptbn4-201ENSMUST00000011895 Fbn1Q61554 2873 aaKnown RBP9.12□□□□□ -0.95
Sptbn4-201ENSMUST00000011895 Dchs1E9PVD3 3291 aa9.09□□□□□ -0.95
Sptbn4-201ENSMUST00000011895 Cmya5Q70KF4 3739 aa8.92□□□□□ -0.98
Sptbn4-201ENSMUST00000011895 SpenQ62504 3644 aaKnown RBP8.9□□□□□ -0.98
Sptbn4-201ENSMUST00000011895 Col7a1Q63870 2944 aa8.9□□□□□ -0.98
Sptbn4-201ENSMUST00000011895 Gm19668J3QMD1 248 aa8.9□□□□□ -0.99
Sptbn4-201ENSMUST00000011895 Muc5acE9QAQ8 3455 aa8.82□□□□□ -1
Sptbn4-201ENSMUST00000011895 Smg1Q8BKX6 3658 aaKnown RBP8.8□□□□□ -1
Sptbn4-201ENSMUST00000011895 Wdfy3Q6VNB8 3508 aa8.74□□□□□ -1.01
Sptbn4-201ENSMUST00000011895 RelnQ60841 3461 aa8.69□□□□□ -1.02
Sptbn4-201ENSMUST00000011895 Csmd1Q923L3 3564 aa8.69□□□□□ -1.02
Sptbn4-201ENSMUST00000011895 Lama5Q61001 3718 aa8.68□□□□□ -1.02
Sptbn4-201ENSMUST00000011895 Gm9918Q8BUR5 174 aa8.67□□□□□ -1.02
Sptbn4-201ENSMUST00000011895 Zfhx4Q9JJN2 3550 aa8.57□□□□□ -1.04
Sptbn4-201ENSMUST00000011895 Muc6Q80T03 2850 aa8.51□□□□□ -1.05
Sptbn4-201ENSMUST00000011895 BsnO88737 3942 aa8.5□□□□□ -1.05
Sptbn4-201ENSMUST00000011895 Gm11939A2A592 99 aa8.38□□□□□ -1.07
Sptbn4-201ENSMUST00000011895 Krtap13-1Q8K198 168 aa8.37□□□□□ -1.07
Sptbn4-201ENSMUST00000011895 Csmd2V9GX34 3611 aa8.35□□□□□ -1.07
Sptbn4-201ENSMUST00000011895 Gm9736A0A1W2P7N1 277 aa8.31□□□□□ -1.08
Sptbn4-201ENSMUST00000011895 Gm884A2A9H6 3643 aa8.27□□□□□ -1.09
Sptbn4-201ENSMUST00000011895 Krtap3-1A2A591 98 aa8.24□□□□□ -1.09
Sptbn4-201ENSMUST00000011895 Muc4Q8JZM8 3443 aa8.21□□□□□ -1.09
Sptbn4-201ENSMUST00000011895 Krtap3-2Q9D638 99 aa8.13□□□□□ -1.11
Sptbn4-201ENSMUST00000011895 Krtap3-3Q9D7P0 99 aa8.13□□□□□ -1.11
Sptbn4-201ENSMUST00000011895 LystP97412 3788 aa8.1□□□□□ -1.11
Sptbn4-201ENSMUST00000011895 Krtap19-5O08632 62 aa8.04□□□□□ -1.12
Sptbn4-201ENSMUST00000011895 Xirp2Q4U4S6 3784 aa8.04□□□□□ -1.12
Sptbn4-201ENSMUST00000011895 Gm6358A0A087WPH4 74 aa8□□□□□ -1.13
Sptbn4-201ENSMUST00000011895 Csmd3Q80T79 3707 aa7.9□□□□□ -1.15
Sptbn4-201ENSMUST00000011895 Sprr2a3Q4KL71 83 aa7.84□□□□□ -1.15
Sptbn4-201ENSMUST00000011895 Sprr2a1Q9CQK8 83 aa7.84□□□□□ -1.15
Sptbn4-201ENSMUST00000011895 Krtap19-9aF8WH65 55 aa7.82□□□□□ -1.16
Sptbn4-201ENSMUST00000011895 Gm10318A0A1W2P728 225 aa7.81□□□□□ -1.16
Sptbn4-201ENSMUST00000011895 Krtap1-5A2A590 122 aa7.78□□□□□ -1.16
Sptbn4-201ENSMUST00000011895 Gm18596A0A1W2P860 280 aa7.77□□□□□ -1.17
Sptbn4-201ENSMUST00000011895 Krtap7-1Q9D3I6 87 aa7.76□□□□□ -1.17
Sptbn4-201ENSMUST00000011895 Svep1A2AVA0 3567 aa7.75□□□□□ -1.17
Sptbn4-201ENSMUST00000011895 Hspg2Q05793 3707 aaKnown RBP7.74□□□□□ -1.17
Sptbn4-201ENSMUST00000011895 Crct1Q6PAI5 102 aa7.74□□□□□ -1.17
Sptbn4-201ENSMUST00000011895 Krtap19-9bQ99NG9 58 aa7.72□□□□□ -1.17
Sptbn4-201ENSMUST00000011895 Krtap8-1O08633 61 aa7.71□□□□□ -1.18
Sptbn4-201ENSMUST00000011895 Dnah7bL7N1Y0 4068 aa7.64□□□□□ -1.19
Sptbn4-201ENSMUST00000011895 Dnah3Q8BW94 4083 aa7.64□□□□□ -1.19
Sptbn4-201ENSMUST00000011895 Sprr2kO70562 68 aa7.62□□□□□ -1.19
Sptbn4-201ENSMUST00000011895 CubnQ9JLB4 3623 aa7.55□□□□□ -1.2
Sptbn4-201ENSMUST00000011895 Gm19402J3QJV4 266 aa7.55□□□□□ -1.2
Sptbn4-201ENSMUST00000011895 Dnah7cA0A087WR13 4024 aa7.45□□□□□ -1.22
Sptbn4-201ENSMUST00000011895 Krtap1-4Q3V2D6 188 aa7.42□□□□□ -1.22
Sptbn4-201ENSMUST00000011895 Sprr2gO70558 76 aa7.4□□□□□ -1.22
Sptbn4-201ENSMUST00000011895 Krtap12-1Q9Z287 130 aa7.39□□□□□ -1.23
Sptbn4-201ENSMUST00000011895 Dnah7aE9Q0T8 4024 aa7.38□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 83.2 ms