RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Dnah17Q69Z23 4481 aa7.4□□□□□ -1.22
Ufd1-201ENSMUST00000005394 Igkv3-7A0A0G2JE31 119 aa7.4□□□□□ -1.23
Ufd1-201ENSMUST00000005394 Limd2Q8BGB5 128 aa7.4□□□□□ -1.23
Ufd1-201ENSMUST00000005394 SycnQ8VCK7 134 aa7.39□□□□□ -1.23
Ufd1-201ENSMUST00000005394 Dync2h1Q45VK7 4306 aa7.38□□□□□ -1.23
Ufd1-201ENSMUST00000005394 Q8K1L6 76 aa7.37□□□□□ -1.23
Ufd1-201ENSMUST00000005394 Ryr2E9Q401 4966 aaKnown RBP7.35□□□□□ -1.23
Ufd1-201ENSMUST00000005394 2310034C09RikQ9D746 214 aa7.35□□□□□ -1.23
Ufd1-201ENSMUST00000005394 Dnah7cA0A087WR13 4024 aa7.35□□□□□ -1.23
Ufd1-201ENSMUST00000005394 Dnah7bL7N1Y0 4068 aa7.34□□□□□ -1.23
Ufd1-201ENSMUST00000005394 AW011738F6S7Q2 159 aa7.34□□□□□ -1.23
Ufd1-201ENSMUST00000005394 Gm9821Q8K076 103 aa7.34□□□□□ -1.23
Ufd1-201ENSMUST00000005394 Uqcr11Q9CPX8 56 aa7.34□□□□□ -1.23
Ufd1-201ENSMUST00000005394 Cypt15B1AXS0 87 aa7.31□□□□□ -1.24
Ufd1-201ENSMUST00000005394 Wfdc3Q14AE4 130 aa7.31□□□□□ -1.24
Ufd1-201ENSMUST00000005394 Gm27235Q3UW50 83 aa7.31□□□□□ -1.24
Ufd1-201ENSMUST00000005394 Igkv3-5A0A140T8M6 119 aa7.3□□□□□ -1.24
Ufd1-201ENSMUST00000005394 Ndufs5Q99LY9 106 aa7.3□□□□□ -1.24
Ufd1-201ENSMUST00000005394 2310050C09RikG5E8Z3 280 aa7.29□□□□□ -1.24
Ufd1-201ENSMUST00000005394 Cypt14J3QPF7 87 aa7.29□□□□□ -1.24
Ufd1-201ENSMUST00000005394 6030445D17RikE9Q8F9 148 aa7.24□□□□□ -1.25
Ufd1-201ENSMUST00000005394 2310061N02RikQ9D6S9 174 aa7.24□□□□□ -1.25
Ufd1-201ENSMUST00000005394 Gm16253D3Z167 63 aa7.22□□□□□ -1.25
Ufd1-201ENSMUST00000005394 Defb38Q7TNV7 63 aa7.22□□□□□ -1.25
Ufd1-201ENSMUST00000005394 Dnah11E9Q7N9 4488 aa7.22□□□□□ -1.25
Ufd1-201ENSMUST00000005394 Vps13dB1ART2 4390 aa7.21□□□□□ -1.26
Ufd1-201ENSMUST00000005394 Gm21798J3QNU5 87 aa7.21□□□□□ -1.26
Ufd1-201ENSMUST00000005394 Defb9Q8R2I6 67 aa7.21□□□□□ -1.26
Ufd1-201ENSMUST00000005394 Gm12216A0A1W2P827 62 aa7.2□□□□□ -1.26
Ufd1-201ENSMUST00000005394 Stard9Q80TF6 4561 aa7.19□□□□□ -1.26
Ufd1-201ENSMUST00000005394 Q8BGJ3 129 aa7.19□□□□□ -1.26
Ufd1-201ENSMUST00000005394 1700012A03RikQ9DAF1 130 aa7.19□□□□□ -1.26
Ufd1-201ENSMUST00000005394 Znf706Q9D115 76 aaKnown RBP7.18□□□□□ -1.26
Ufd1-201ENSMUST00000005394 Gm10065F6TJM2 114 aa7.17□□□□□ -1.26
Ufd1-201ENSMUST00000005394 HrnrQ8VHD8 2496 aa7.15□□□□□ -1.27
Ufd1-201ENSMUST00000005394 Dnah9B1AR51 4484 aa7.13□□□□□ -1.27
Ufd1-201ENSMUST00000005394 Krtap10-4Q08EG8 221 aa7.13□□□□□ -1.27
Ufd1-201ENSMUST00000005394 Gm10642Q3TWM1 71 aa7.13□□□□□ -1.27
Ufd1-201ENSMUST00000005394 Pla2g10Q9QXX3 151 aa7.13□□□□□ -1.27
Ufd1-201ENSMUST00000005394 Krtap29-1A2A5X4 342 aa7.11□□□□□ -1.27
Ufd1-201ENSMUST00000005394 Dnah2P0C6F1 4456 aa7.11□□□□□ -1.27
Ufd1-201ENSMUST00000005394 Pkd1O08852 4293 aa7.09□□□□□ -1.27
Ufd1-201ENSMUST00000005394 Gm20538F6Z9R1 75 aa7.07□□□□□ -1.28
Ufd1-201ENSMUST00000005394 SacsQ9JLC8 4582 aa7.07□□□□□ -1.28
Ufd1-201ENSMUST00000005394 NbdyA0A0N4SUI7 68 aa7.06□□□□□ -1.28
Ufd1-201ENSMUST00000005394 Nupr2Q497P3 102 aa7.05□□□□□ -1.28
Ufd1-201ENSMUST00000005394 Defb13Q8R2I4 64 aa7.05□□□□□ -1.28
Ufd1-201ENSMUST00000005394 Dync1h1Q9JHU4 4644 aaKnown RBP7.04□□□□□ -1.28
Ufd1-201ENSMUST00000005394 Defb39Q70KL3 74 aa7.04□□□□□ -1.28
Ufd1-201ENSMUST00000005394 Gm2696A0A1W2P709 240 aa7.02□□□□□ -1.29
Ufd1-201ENSMUST00000005394 Dnah5Q8VHE6 4621 aa7.01□□□□□ -1.29
Ufd1-201ENSMUST00000005394 Fat1A0A1L1SQU7 4645 aa6.98□□□□□ -1.29
Ufd1-201ENSMUST00000005394 Tnp2P11378 117 aa6.98□□□□□ -1.29
Ufd1-201ENSMUST00000005394 2310079G19RikQ9D6L6 185 aa6.96□□□□□ -1.3
Ufd1-201ENSMUST00000005394 Anapc11Q9CPX9 84 aa6.95□□□□□ -1.3
Ufd1-201ENSMUST00000005394 Gm10999F6Q4M4 69 aa6.93□□□□□ -1.3
Ufd1-201ENSMUST00000005394 Adm2Q7TNK8 150 aa6.93□□□□□ -1.3
Ufd1-201ENSMUST00000005394 Pkhd1E9PZ36 4059 aa6.93□□□□□ -1.3
Ufd1-201ENSMUST00000005394 Mp68P56379 58 aa6.92□□□□□ -1.3
Ufd1-201ENSMUST00000005394 Krtap13O88375 197 aa6.91□□□□□ -1.3
Ufd1-201ENSMUST00000005394 Gpr15lA0A0B4J1N3 78 aa6.9□□□□□ -1.3
Ufd1-201ENSMUST00000005394 Herc2Q4U2R1 4836 aa6.89□□□□□ -1.31
Ufd1-201ENSMUST00000005394 A930033H14RikG5E8X6 103 aa6.88□□□□□ -1.31
Ufd1-201ENSMUST00000005394 Krtap14O08640 167 aa6.86□□□□□ -1.31
Ufd1-201ENSMUST00000005394 Kmt2cQ8BRH4 4903 aa6.86□□□□□ -1.31
Ufd1-201ENSMUST00000005394 Hectd4E9Q2E4 4418 aa6.85□□□□□ -1.31
Ufd1-201ENSMUST00000005394 Krtap3-2Q9D638 99 aa6.84□□□□□ -1.32
Ufd1-201ENSMUST00000005394 Krtap3-3Q9D7P0 99 aa6.84□□□□□ -1.32
Ufd1-201ENSMUST00000005394 Birc6O88738 4882 aa6.83□□□□□ -1.32
Ufd1-201ENSMUST00000005394 4930507D05RikQ8C9C9 103 aa6.82□□□□□ -1.32
Ufd1-201ENSMUST00000005394 Dnah8Q91XQ0 4731 aa6.82□□□□□ -1.32
Ufd1-201ENSMUST00000005394 ApobE9Q414 4505 aa6.81□□□□□ -1.32
Ufd1-201ENSMUST00000005394 Romo1P60603 79 aa6.79□□□□□ -1.32
Ufd1-201ENSMUST00000005394 Spaca4Q80ZQ0 127 aa6.78□□□□□ -1.32
Ufd1-201ENSMUST00000005394 D6Ertd527eA0A0N4SWI3 464 aa6.77□□□□□ -1.33
Ufd1-201ENSMUST00000005394 Defb1P56386 69 aa6.77□□□□□ -1.33
Ufd1-201ENSMUST00000005394 Kiaa1109A2AAE1 5005 aa6.76□□□□□ -1.33
Ufd1-201ENSMUST00000005394 1600014C23RikQ9DAX4 101 aa6.74□□□□□ -1.33
Ufd1-201ENSMUST00000005394 Vps13bQ80TY5 3993 aa6.73□□□□□ -1.33
Ufd1-201ENSMUST00000005394 PcloQ9QYX7 5068 aa6.71□□□□□ -1.34
Ufd1-201ENSMUST00000005394 Lce1mQ9CR91 182 aa6.69□□□□□ -1.34
Ufd1-201ENSMUST00000005394 Abca13Q5SSE9 5034 aa6.68□□□□□ -1.34
Ufd1-201ENSMUST00000005394 HydinQ80W93 5154 aa6.67□□□□□ -1.34
Ufd1-201ENSMUST00000005394 Gm20537G3UYK7 97 aa6.66□□□□□ -1.34
Ufd1-201ENSMUST00000005394 Gm4491E0CX42 125 aa6.64□□□□□ -1.35
Ufd1-201ENSMUST00000005394 Dnhd1D3Z2X2 4750 aa6.61□□□□□ -1.35
Ufd1-201ENSMUST00000005394 Pkhd1l1Q80ZA4 4249 aa6.6□□□□□ -1.35
Ufd1-201ENSMUST00000005394 Rps29P62274 56 aa6.58□□□□□ -1.36
Ufd1-201ENSMUST00000005394 Cox6b2Q80ZN9 88 aa6.58□□□□□ -1.36
Ufd1-201ENSMUST00000005394 Fat3Q8BNA6 4555 aa6.58□□□□□ -1.36
Ufd1-201ENSMUST00000005394 Mycbp2Q7TPH6 4711 aa6.57□□□□□ -1.36
Ufd1-201ENSMUST00000005394 Gm3880A0A1B0GSB3 72 aa6.55□□□□□ -1.36
Ufd1-201ENSMUST00000005394 Lrp1Q91ZX7 4545 aaKnown RBP6.55□□□□□ -1.36
Ufd1-201ENSMUST00000005394 Herc1E9PZP8 4859 aa6.54□□□□□ -1.36
Ufd1-201ENSMUST00000005394 Lrp1bQ9JI18 4599 aa6.54□□□□□ -1.36
Ufd1-201ENSMUST00000005394 Gm18596A0A1W2P860 280 aa6.53□□□□□ -1.36
Ufd1-201ENSMUST00000005394 Krtap19-5O08632 62 aa6.53□□□□□ -1.36
Ufd1-201ENSMUST00000005394 RetnlbQ99P86 105 aa6.52□□□□□ -1.37
Ufd1-201ENSMUST00000005394 Fat2Q5F226 4351 aa6.52□□□□□ -1.37
Ufd1-201ENSMUST00000005394 Gm11939A2A592 99 aa6.48□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 75.1 ms