RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Psors1c2Q80ZC9 134 aa10.19□□□□□ -0.78
Upf1-202ENSMUST00000215817 Sostdc1Q9CQN4 206 aa10.19□□□□□ -0.78
Upf1-202ENSMUST00000215817 Znf414Q9DCK4 299 aa10.18□□□□□ -0.78
Upf1-202ENSMUST00000215817 Sprr2jO70561 109 aa10.17□□□□□ -0.78
Upf1-202ENSMUST00000215817 Defb13Q8R2I4 64 aa10.17□□□□□ -0.78
Upf1-202ENSMUST00000215817 Phf5aP83870 110 aaKnown RBP10.16□□□□□ -0.78
Upf1-202ENSMUST00000215817 Gm10642Q3TWM1 71 aa10.16□□□□□ -0.78
Upf1-202ENSMUST00000215817 Gm11627A6PWP4 55 aa10.15□□□□□ -0.78
Upf1-202ENSMUST00000215817 RetnlbQ99P86 105 aa10.15□□□□□ -0.78
Upf1-202ENSMUST00000215817 Cmya5Q70KF4 3739 aa10.15□□□□□ -0.78
Upf1-202ENSMUST00000215817 2310034G01RikA0A286YDL3 209 aa10.14□□□□□ -0.79
Upf1-202ENSMUST00000215817 Col7a1Q63870 2944 aa10.14□□□□□ -0.79
Upf1-202ENSMUST00000215817 Wfdc6bF6ULY1 148 aa10.13□□□□□ -0.79
Upf1-202ENSMUST00000215817 Fam168bQ80XQ8 194 aa10.13□□□□□ -0.79
Upf1-202ENSMUST00000215817 Bean1Q9EQG5 255 aa10.13□□□□□ -0.79
Upf1-202ENSMUST00000215817 Q9DAA7 145 aa10.12□□□□□ -0.79
Upf1-202ENSMUST00000215817 Defb37Q7TMD2 62 aa10.12□□□□□ -0.79
Upf1-202ENSMUST00000215817 Sprr4Q8CGN8 76 aa10.11□□□□□ -0.79
Upf1-202ENSMUST00000215817 Gm11213A0A1B0GR83 88 aa10.11□□□□□ -0.79
Upf1-202ENSMUST00000215817 Gm9507D3Z5T3 223 aa10.1□□□□□ -0.79
Upf1-202ENSMUST00000215817 Igkv8-21A0A140T8P7 120 aa10.1□□□□□ -0.79
Upf1-202ENSMUST00000215817 Eif4ebp3Q80VV3 101 aa10.1□□□□□ -0.79
Upf1-202ENSMUST00000215817 Tenm1Q9WTS4 2731 aa10.09□□□□□ -0.79
Upf1-202ENSMUST00000215817 Igkv3-3A0A140T8Q0 119 aa10.09□□□□□ -0.79
Upf1-202ENSMUST00000215817 Znf706Q9D115 76 aaKnown RBP10.09□□□□□ -0.79
Upf1-202ENSMUST00000215817 P84750 121 aa10.08□□□□□ -0.8
Upf1-202ENSMUST00000215817 Igkv8-27A0A0G2JF28 120 aa10.07□□□□□ -0.8
Upf1-202ENSMUST00000215817 Igkv8-30A0A140T8M3 121 aa10.07□□□□□ -0.8
Upf1-202ENSMUST00000215817 Defb39Q70KL3 74 aa10.07□□□□□ -0.8
Upf1-202ENSMUST00000215817 Wfdc3Q14AE4 130 aa10.04□□□□□ -0.8
Upf1-202ENSMUST00000215817 Ighv2-5A0A0A6YY69 116 aa10.04□□□□□ -0.8
Upf1-202ENSMUST00000215817 Gm17689B3GLJ4 109 aa10.02□□□□□ -0.81
Upf1-202ENSMUST00000215817 Gm5617Q91VN2 117 aa10.02□□□□□ -0.81
Upf1-202ENSMUST00000215817 Defb50Q6TU36 73 aa10.01□□□□□ -0.81
Upf1-202ENSMUST00000215817 Dmac1Q9CQ00 111 aa10.01□□□□□ -0.81
Upf1-202ENSMUST00000215817 Sprr1bQ62267 153 aa10□□□□□ -0.81
Upf1-202ENSMUST00000215817 AI606181Q8C7B9 129 aa10□□□□□ -0.81
Upf1-202ENSMUST00000215817 Cdc42se1Q8BHL7 80 aa10□□□□□ -0.81
Upf1-202ENSMUST00000215817 Gm10308Q9CVR5 141 aa9.99□□□□□ -0.81
Upf1-202ENSMUST00000215817 Reg3aO09037 175 aa9.99□□□□□ -0.81
Upf1-202ENSMUST00000215817 Gm9903Q8C9Y8 129 aa9.99□□□□□ -0.81
Upf1-202ENSMUST00000215817 C530025M09RikF6RGA8 229 aa9.97□□□□□ -0.81
Upf1-202ENSMUST00000215817 Msrb1Q9JLC3 116 aa9.97□□□□□ -0.81
Upf1-202ENSMUST00000215817 Ighv2-2A0A075B5P8 116 aa9.96□□□□□ -0.82
Upf1-202ENSMUST00000215817 P01821 116 aa9.96□□□□□ -0.82
Upf1-202ENSMUST00000215817 Csmd2V9GX34 3611 aa9.95□□□□□ -0.82
Upf1-202ENSMUST00000215817 Igkv3-7A0A0G2JE31 119 aa9.95□□□□□ -0.82
Upf1-202ENSMUST00000215817 Prol1E9PYQ4 312 aa9.95□□□□□ -0.82
Upf1-202ENSMUST00000215817 Mrpl34Q99N91 92 aa9.94□□□□□ -0.82
Upf1-202ENSMUST00000215817 Defb9Q8R2I6 67 aa9.94□□□□□ -0.82
Upf1-202ENSMUST00000215817 CnbpP53996 178 aaKnown RBP9.92□□□□□ -0.82
Upf1-202ENSMUST00000215817 Gm10160F6Y577 67 aa9.91□□□□□ -0.82
Upf1-202ENSMUST00000215817 AY074887Q8R5F9 132 aa9.91□□□□□ -0.82
Upf1-202ENSMUST00000215817 VwfQ8CIZ8 2813 aa9.9□□□□□ -0.83
Upf1-202ENSMUST00000215817 Cox6a2P43023 97 aa9.89□□□□□ -0.83
Upf1-202ENSMUST00000215817 Krtap10-4Q08EG8 221 aa9.89□□□□□ -0.83
Upf1-202ENSMUST00000215817 Coa5Q99M07 74 aa9.88□□□□□ -0.83
Upf1-202ENSMUST00000215817 Gm28230A0A0A0MQ91 144 aa9.88□□□□□ -0.83
Upf1-202ENSMUST00000215817 C130032M10RikQ8C888 123 aa9.88□□□□□ -0.83
Upf1-202ENSMUST00000215817 Gm44790A0A0N4SV91 103 aa9.87□□□□□ -0.83
Upf1-202ENSMUST00000215817 Megf8P60882 2789 aa9.86□□□□□ -0.83
Upf1-202ENSMUST00000215817 Gm21886J3QJU9 214 aa9.86□□□□□ -0.83
Upf1-202ENSMUST00000215817 Elof1P60003 83 aa9.86□□□□□ -0.83
Upf1-202ENSMUST00000215817 Rpl37aP61514 92 aa9.86□□□□□ -0.83
Upf1-202ENSMUST00000215817 Fam229bQ8CF36 80 aa9.86□□□□□ -0.83
Upf1-202ENSMUST00000215817 1700018G05RikA0A1B0GSI2 66 aa9.86□□□□□ -0.83
Upf1-202ENSMUST00000215817 Gpr15lA0A0B4J1N3 78 aa9.86□□□□□ -0.83
Upf1-202ENSMUST00000215817 2310050C09RikG5E8Z3 280 aa9.85□□□□□ -0.83
Upf1-202ENSMUST00000215817 Spaca4Q80ZQ0 127 aa9.84□□□□□ -0.83
Upf1-202ENSMUST00000215817 Igkv8-28A0A0G2JE47 121 aa9.84□□□□□ -0.83
Upf1-202ENSMUST00000215817 Gm10770F7D043 238 aa9.84□□□□□ -0.83
Upf1-202ENSMUST00000215817 TgO08710 2766 aa9.83□□□□□ -0.84
Upf1-202ENSMUST00000215817 Phxr4P15974 95 aa9.82□□□□□ -0.84
Upf1-202ENSMUST00000215817 Gm27235Q3UW50 83 aa9.82□□□□□ -0.84
Upf1-202ENSMUST00000215817 Anapc11Q9CPX9 84 aa9.81□□□□□ -0.84
Upf1-202ENSMUST00000215817 Igkv8-19A0A0G2JFN8 121 aa9.8□□□□□ -0.84
Upf1-202ENSMUST00000215817 A330070K13RikQ8CA53 115 aa9.8□□□□□ -0.84
Upf1-202ENSMUST00000215817 Smim29Q8R043 75 aa9.79□□□□□ -0.84
Upf1-202ENSMUST00000215817 Gm20661K7N787 53 aa9.79□□□□□ -0.84
Upf1-202ENSMUST00000215817 Tenm2Q9WTS5 2764 aa9.79□□□□□ -0.84
Upf1-202ENSMUST00000215817 Muc6Q80T03 2850 aa9.78□□□□□ -0.84
Upf1-202ENSMUST00000215817 Limd2Q8BGB5 128 aa9.76□□□□□ -0.85
Upf1-202ENSMUST00000215817 Gm10643Q3URG9 111 aa9.74□□□□□ -0.85
Upf1-202ENSMUST00000215817 Zcchc13Q9D548 170 aa9.74□□□□□ -0.85
Upf1-202ENSMUST00000215817 2310061N02RikQ9D6S9 174 aa9.72□□□□□ -0.85
Upf1-202ENSMUST00000215817 Q8BT88 171 aa9.72□□□□□ -0.85
Upf1-202ENSMUST00000215817 Gm10065F6TJM2 114 aa9.7□□□□□ -0.86
Upf1-202ENSMUST00000215817 Krtap13O88375 197 aa9.7□□□□□ -0.86
Upf1-202ENSMUST00000215817 Krtap10-10A0A1W2P7T6 217 aa9.7□□□□□ -0.86
Upf1-202ENSMUST00000215817 Cystm1Q8K353 104 aa9.7□□□□□ -0.86
Upf1-202ENSMUST00000215817 Ank2Q8C8R3 3898 aa9.69□□□□□ -0.86
Upf1-202ENSMUST00000215817 Chchd10Q7TNL9 138 aa9.66□□□□□ -0.86
Upf1-202ENSMUST00000215817 NbdyA0A0N4SUI7 68 aa9.61□□□□□ -0.87
Upf1-202ENSMUST00000215817 SmcpP15265 143 aa9.61□□□□□ -0.87
Upf1-202ENSMUST00000215817 A930002H24RikQ8C8Y3 163 aa9.61□□□□□ -0.87
Upf1-202ENSMUST00000215817 Sprr1aQ62266 144 aa9.61□□□□□ -0.87
Upf1-202ENSMUST00000215817 Fam104aA2A6P4 185 aa9.59□□□□□ -0.87
Upf1-202ENSMUST00000215817 Gm2696A0A1W2P709 240 aa9.56□□□□□ -0.88
Upf1-202ENSMUST00000215817 Gm7276Q3TYW4 209 aa9.56□□□□□ -0.88
Upf1-202ENSMUST00000215817 Gm10999F6Q4M4 69 aa9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 89 ms