RNA–Protein interactions for RNA: ENSMUST00000117506.8

Ube4a-201, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 6,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-201ENSMUST00000117506 Hivep3A2A884 2348 aa4.04□□□□□ -1.76
Ube4a-201ENSMUST00000117506 Rpl37Q9D823 97 aa4.04□□□□□ -1.76
Ube4a-201ENSMUST00000117506 Itpr3P70227 2670 aa4.03□□□□□ -1.76
Ube4a-201ENSMUST00000117506 TrioQ0KL02 3102 aa4.03□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Setd2E9Q5F9 2537 aa4.02□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Lama3Q61789 3330 aa4.02□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Gm3233E9Q2H5 230 aa4.02□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Map1aQ9QYR6 2776 aa4.02□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Prune2Q52KR3 3084 aa4.01□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Gm10065F6TJM2 114 aa4.01□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Anapc11Q9CPX9 84 aa3.99□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Tep1P97499 2629 aa3.99□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Gm7173A0A0G2JEB6 3132 aa3.98□□□□□ -1.77
Ube4a-201ENSMUST00000117506 1700042G07RikB1AUF7 90 aa3.98□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Ndufaf8A2AMZ4 74 aa3.98□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Myo18bE9PV66 2605 aa3.98□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Cox6b2Q80ZN9 88 aa3.97□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Mast4Q811L6 2618 aa3.97□□□□□ -1.77
Ube4a-201ENSMUST00000117506 CicQ924A2 2510 aa3.97□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Szt2A2A9C3 3431 aa3.97□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Fbn2Q61555 2907 aa3.97□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Akap13E9Q394 2776 aa3.97□□□□□ -1.77
Ube4a-201ENSMUST00000117506 KalrnA2CG49 2964 aa3.97□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Dmxl1Q6PNC0 3013 aa3.97□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Krtap10-10A0A1W2P7T6 217 aa3.97□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Gm10139O88245 57 aa3.97□□□□□ -1.77
Ube4a-201ENSMUST00000117506 Cdh23Q99PF4 3354 aa3.96□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Gcn1E9PVA8 2671 aaKnown RBP3.96□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Gm10382Q3V0T5 144 aa3.96□□□□□ -1.78
Ube4a-201ENSMUST00000117506 MgaA2AWL7 3003 aaKnown RBP3.96□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Sec61bQ9CQS8 96 aaKnown RBP3.95□□□□□ -1.78
Ube4a-201ENSMUST00000117506 4933415A04RikQ9D443 101 aa3.95□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Kmt2bO08550 2713 aa3.94□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Gm10320E9PW43 113 aa3.94□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Usp9yF8VPU6 2556 aa3.94□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Sprr1aQ62266 144 aa3.93□□□□□ -1.78
Ube4a-201ENSMUST00000117506 BC029722A0A0N4SW31 51 aa3.93□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Ubr5Q80TP3 2792 aa3.92□□□□□ -1.78
Ube4a-201ENSMUST00000117506 AspmQ8CJ27 3122 aa3.92□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Dmbt1Q60997 2085 aa3.92□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Notch2O35516 2470 aa3.92□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Gm7138L7N2C3 230 aa3.91□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Gm19426M0QWC7 77 aa3.91□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Gm3238W4VSP7 230 aa3.91□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Gm16253D3Z167 63 aa3.9□□□□□ -1.78
Ube4a-201ENSMUST00000117506 Wdfy4E9Q2M9 3149 aa3.89□□□□□ -1.79
Ube4a-201ENSMUST00000117506 Gm17349F7BGH6 99 aa3.89□□□□□ -1.79
Ube4a-201ENSMUST00000117506 PtprqP0C5E4 2300 aa3.89□□□□□ -1.79
Ube4a-201ENSMUST00000117506 FlnbQ80X90 2602 aaKnown RBP3.89□□□□□ -1.79
Ube4a-201ENSMUST00000117506 Krtap15-1Q9QZU5 150 aa3.89□□□□□ -1.79
Ube4a-201ENSMUST00000117506 Gm36176A0A1W2P8D5 158 aa3.88□□□□□ -1.79
Ube4a-201ENSMUST00000117506 BptfA2A654 3036 aaKnown RBP3.87□□□□□ -1.79
Ube4a-201ENSMUST00000117506 FrylF8VQ05 3007 aa3.87□□□□□ -1.79
Ube4a-201ENSMUST00000117506 NipblQ6KCD5 2798 aaKnown RBP3.86□□□□□ -1.79
Ube4a-201ENSMUST00000117506 AtrQ9JKK8 2635 aa3.86□□□□□ -1.79
Ube4a-201ENSMUST00000117506 Gm40193A0A1B0GT39 78 aa3.86□□□□□ -1.79
Ube4a-201ENSMUST00000117506 Muc2Q80Z19 2680 aa3.86□□□□□ -1.79
Ube4a-201ENSMUST00000117506 Gm5767A0A0J9YTU8 78 aa3.85□□□□□ -1.79
Ube4a-201ENSMUST00000117506 2310050C09RikG5E8Z3 280 aa3.85□□□□□ -1.79
Ube4a-201ENSMUST00000117506 Bod1lE9Q6J5 3032 aa3.84□□□□□ -1.8
Ube4a-201ENSMUST00000117506 Gm7137J3QMW1 236 aa3.83□□□□□ -1.8
Ube4a-201ENSMUST00000117506 Prrc2cQ3TLH4 2846 aaKnown RBP3.83□□□□□ -1.8
Ube4a-201ENSMUST00000117506 Unc80Q8BLN6 3261 aa3.81□□□□□ -1.8
Ube4a-201ENSMUST00000117506 Krtap29-1A2A5X4 342 aa3.81□□□□□ -1.8
Ube4a-201ENSMUST00000117506 Cystm1Q8K353 104 aa3.81□□□□□ -1.8
Ube4a-201ENSMUST00000117506 PolqQ8CGS6 2544 aa3.8□□□□□ -1.8
Ube4a-201ENSMUST00000117506 Rps29P62274 56 aa3.8□□□□□ -1.8
Ube4a-201ENSMUST00000117506 Stab1Q8R4Y4 2571 aa3.8□□□□□ -1.8
Ube4a-201ENSMUST00000117506 2310061N02RikQ9D6S9 174 aa3.79□□□□□ -1.8
Ube4a-201ENSMUST00000117506 Gm9112A2AI92 75 aa3.79□□□□□ -1.8
Ube4a-201ENSMUST00000117506 Lrrc37aB1AWG4 3215 aa3.78□□□□□ -1.8
Ube4a-201ENSMUST00000117506 A030014E15RikA0A1Y7VJV2 120 aa3.78□□□□□ -1.8
Ube4a-201ENSMUST00000117506 Notch1Q01705 2531 aa3.78□□□□□ -1.8
Ube4a-201ENSMUST00000117506 Vps13aQ5H8C4 3166 aa3.78□□□□□ -1.8
Ube4a-201ENSMUST00000117506 Cfap54Q8C6S9 3106 aa3.77□□□□□ -1.81
Ube4a-201ENSMUST00000117506 Tnp1P10856 55 aa3.77□□□□□ -1.81
Ube4a-201ENSMUST00000117506 Chd6A3KFM7 2711 aa3.76□□□□□ -1.81
Ube4a-201ENSMUST00000117506 NbeaQ9EPN1 2936 aa3.76□□□□□ -1.81
Ube4a-201ENSMUST00000117506 Lama1P19137 3084 aa3.76□□□□□ -1.81
Ube4a-201ENSMUST00000117506 A730071L15RikQ8C4X0 137 aa3.76□□□□□ -1.81
Ube4a-201ENSMUST00000117506 Fn1P11276 2477 aaKnown RBP3.76□□□□□ -1.81
Ube4a-201ENSMUST00000117506 Jbts17Q8CE72 3214 aa3.76□□□□□ -1.81
Ube4a-201ENSMUST00000117506 Nsd1O88491 2588 aaKnown RBP3.76□□□□□ -1.81
Ube4a-201ENSMUST00000117506 Utp20Q5XG71 2788 aaKnown RBP3.76□□□□□ -1.81
Ube4a-201ENSMUST00000117506 AtmQ62388 3066 aa3.76□□□□□ -1.81
Ube4a-201ENSMUST00000117506 Ash1lQ99MY8 2958 aa3.75□□□□□ -1.81
Ube4a-201ENSMUST00000117506 Ranbp2Q9ERU9 3053 aaKnown RBP3.74□□□□□ -1.81
Ube4a-201ENSMUST00000117506 Gm21887J3QQ04 176 aa3.74□□□□□ -1.81
Ube4a-201ENSMUST00000117506 Trank1Q8BV79 2999 aa3.73□□□□□ -1.81
Ube4a-201ENSMUST00000117506 Dmxl2Q8BPN8 3032 aa3.73□□□□□ -1.81
Ube4a-201ENSMUST00000117506 Itpr2Q9Z329 2701 aa3.72□□□□□ -1.81
Ube4a-201ENSMUST00000117506 FryE9Q8I9 3020 aa3.72□□□□□ -1.81
Ube4a-201ENSMUST00000117506 Gm2310J3QNJ2 377 aa3.72□□□□□ -1.81
Ube4a-201ENSMUST00000117506 9530053A07RikE9PVG8 2581 aa3.71□□□□□ -1.82
Ube4a-201ENSMUST00000117506 Krtap14O08640 167 aa3.71□□□□□ -1.82
Ube4a-201ENSMUST00000117506 Frem2Q6NVD0 3160 aa3.69□□□□□ -1.82
Ube4a-201ENSMUST00000117506 FasnP19096 2504 aaKnown RBP3.69□□□□□ -1.82
Ube4a-201ENSMUST00000117506 FlncQ8VHX6 2726 aaKnown RBP3.69□□□□□ -1.82
Ube4a-201ENSMUST00000117506 Wdfy3Q6VNB8 3508 aa3.69□□□□□ -1.82
Ube4a-201ENSMUST00000117506 Krtap13O88375 197 aa3.69□□□□□ -1.82
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms