RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Hectd1Q69ZR2 2618 aaKnown RBP6.32□□□□□ -1.4
Vcan-202ENSMUST00000109544 Fn1P11276 2477 aaKnown RBP6.3□□□□□ -1.4
Vcan-202ENSMUST00000109544 CenpfE9Q3P4 2997 aaKnown RBP6.3□□□□□ -1.4
Vcan-202ENSMUST00000109544 FasnP19096 2504 aaKnown RBP6.29□□□□□ -1.4
Vcan-202ENSMUST00000109544 Myo18bE9PV66 2605 aa6.28□□□□□ -1.4
Vcan-202ENSMUST00000109544 Gm2310J3QNJ2 377 aa6.28□□□□□ -1.4
Vcan-202ENSMUST00000109544 Rps29P62274 56 aa6.27□□□□□ -1.41
Vcan-202ENSMUST00000109544 Nsd1O88491 2588 aaKnown RBP6.27□□□□□ -1.41
Vcan-202ENSMUST00000109544 Gm7138L7N2C3 230 aa6.26□□□□□ -1.41
Vcan-202ENSMUST00000109544 Gm3238W4VSP7 230 aa6.26□□□□□ -1.41
Vcan-202ENSMUST00000109544 PcntP48725 2898 aa6.25□□□□□ -1.41
Vcan-202ENSMUST00000109544 2310050C09RikG5E8Z3 280 aa6.22□□□□□ -1.41
Vcan-202ENSMUST00000109544 Gm42715A0A087WP63 3095 aaKnown RBP6.21□□□□□ -1.42
Vcan-202ENSMUST00000109544 Lelp1Q9DAE3 120 aa6.21□□□□□ -1.42
Vcan-202ENSMUST00000109544 Lama2Q60675 3118 aaKnown RBP6.2□□□□□ -1.42
Vcan-202ENSMUST00000109544 HrnrQ8VHD8 2496 aa6.19□□□□□ -1.42
Vcan-202ENSMUST00000109544 Kmt2bO08550 2713 aa6.17□□□□□ -1.42
Vcan-202ENSMUST00000109544 Usp24B1AY13 2617 aaKnown RBP6.17□□□□□ -1.42
Vcan-202ENSMUST00000109544 Gm17349F7BGH6 99 aa6.16□□□□□ -1.42
Vcan-202ENSMUST00000109544 Dnah12Q3V0Q1 3086 aa6.15□□□□□ -1.42
Vcan-202ENSMUST00000109544 Tep1P97499 2629 aa6.15□□□□□ -1.42
Vcan-202ENSMUST00000109544 Gm9508A0A1W2P7W0 230 aa6.15□□□□□ -1.43
Vcan-202ENSMUST00000109544 Ndufaf8A2AMZ4 74 aa6.14□□□□□ -1.43
Vcan-202ENSMUST00000109544 Ep400Q8CHI8 3072 aaKnown RBP6.14□□□□□ -1.43
Vcan-202ENSMUST00000109544 Gm40193A0A1B0GT39 78 aa6.14□□□□□ -1.43
Vcan-202ENSMUST00000109544 Tnrc18Q80WC3 2878 aa6.14□□□□□ -1.43
Vcan-202ENSMUST00000109544 AtrQ9JKK8 2635 aa6.13□□□□□ -1.43
Vcan-202ENSMUST00000109544 Cep350E9Q309 3095 aa6.1□□□□□ -1.43
Vcan-202ENSMUST00000109544 Gm7137J3QMW1 236 aa6.1□□□□□ -1.43
Vcan-202ENSMUST00000109544 Krtap14O08640 167 aa6.09□□□□□ -1.43
Vcan-202ENSMUST00000109544 Itpr1P11881 2749 aa6.09□□□□□ -1.43
Vcan-202ENSMUST00000109544 FlnaQ8BTM8 2647 aaKnown RBP6.06□□□□□ -1.44
Vcan-202ENSMUST00000109544 D6Ertd527eA0A0N4SWI3 464 aa6.06□□□□□ -1.44
Vcan-202ENSMUST00000109544 Gcn1E9PVA8 2671 aaKnown RBP6.05□□□□□ -1.44
Vcan-202ENSMUST00000109544 UtrnE9Q6R7 3430 aa6.05□□□□□ -1.44
Vcan-202ENSMUST00000109544 Gm9195A0A140LHT4 2805 aa6.04□□□□□ -1.44
Vcan-202ENSMUST00000109544 Gm9112A2AI92 75 aa6.04□□□□□ -1.44
Vcan-202ENSMUST00000109544 Tnp2P11378 117 aa6.02□□□□□ -1.45
Vcan-202ENSMUST00000109544 Gm21887J3QQ04 176 aa6.02□□□□□ -1.45
Vcan-202ENSMUST00000109544 Notch1Q01705 2531 aa6.01□□□□□ -1.45
Vcan-202ENSMUST00000109544 Tnp1P10856 55 aa6□□□□□ -1.45
Vcan-202ENSMUST00000109544 Krtap13O88375 197 aa5.99□□□□□ -1.45
Vcan-202ENSMUST00000109544 Itpr3P70227 2670 aa5.99□□□□□ -1.45
Vcan-202ENSMUST00000109544 Igsf10Q3V1M1 2594 aa5.95□□□□□ -1.46
Vcan-202ENSMUST00000109544 2310061N02RikQ9D6S9 174 aa5.94□□□□□ -1.46
Vcan-202ENSMUST00000109544 Chd7A2AJK6 2986 aaKnown RBP5.93□□□□□ -1.46
Vcan-202ENSMUST00000109544 Gm36176A0A1W2P8D5 158 aa5.92□□□□□ -1.46
Vcan-202ENSMUST00000109544 Mast4Q811L6 2618 aa5.9□□□□□ -1.46
Vcan-202ENSMUST00000109544 Map1aQ9QYR6 2776 aa5.89□□□□□ -1.47
Vcan-202ENSMUST00000109544 Prune2Q52KR3 3084 aa5.89□□□□□ -1.47
Vcan-202ENSMUST00000109544 TrioQ0KL02 3102 aa5.88□□□□□ -1.47
Vcan-202ENSMUST00000109544 HttP42859 3119 aa5.86□□□□□ -1.47
Vcan-202ENSMUST00000109544 NipblQ6KCD5 2798 aaKnown RBP5.86□□□□□ -1.47
Vcan-202ENSMUST00000109544 Stab1Q8R4Y4 2571 aa5.84□□□□□ -1.47
Vcan-202ENSMUST00000109544 Prrc2cQ3TLH4 2846 aaKnown RBP5.82□□□□□ -1.48
Vcan-202ENSMUST00000109544 MgaA2AWL7 3003 aaKnown RBP5.77□□□□□ -1.49
Vcan-202ENSMUST00000109544 Gm7173A0A0G2JEB6 3132 aa5.77□□□□□ -1.49
Vcan-202ENSMUST00000109544 Gm20537G3UYK7 97 aa5.75□□□□□ -1.49
Vcan-202ENSMUST00000109544 Mki67E9PVX6 3177 aaKnown RBP5.75□□□□□ -1.49
Vcan-202ENSMUST00000109544 Col12a1Q60847 3120 aa5.74□□□□□ -1.49
Vcan-202ENSMUST00000109544 Gm9507D3Z5T3 223 aa5.74□□□□□ -1.49
Vcan-202ENSMUST00000109544 9530053A07RikE9PVG8 2581 aa5.74□□□□□ -1.49
Vcan-202ENSMUST00000109544 Usp34Q6ZQ93 3582 aa5.72□□□□□ -1.49
Vcan-202ENSMUST00000109544 Fbn2Q61555 2907 aa5.71□□□□□ -1.49
Vcan-202ENSMUST00000109544 Rev3lQ61493 3122 aa5.71□□□□□ -1.5
Vcan-202ENSMUST00000109544 Dmxl1Q6PNC0 3013 aa5.71□□□□□ -1.5
Vcan-202ENSMUST00000109544 B930094E09RikQ8C4T2 136 aa5.7□□□□□ -1.5
Vcan-202ENSMUST00000109544 Lama3Q61789 3330 aa5.7□□□□□ -1.5
Vcan-202ENSMUST00000109544 Stab2Q8R4U0 2559 aa5.69□□□□□ -1.5
Vcan-202ENSMUST00000109544 Gm5965D3Z724 196 aa5.67□□□□□ -1.5
Vcan-202ENSMUST00000109544 A930033H14RikG5E8X6 103 aa5.67□□□□□ -1.5
Vcan-202ENSMUST00000109544 KalrnA2CG49 2964 aa5.67□□□□□ -1.5
Vcan-202ENSMUST00000109544 Chd6A3KFM7 2711 aa5.66□□□□□ -1.5
Vcan-202ENSMUST00000109544 Tenm4Q3UHK6 2771 aa5.66□□□□□ -1.5
Vcan-202ENSMUST00000109544 Jbts17Q8CE72 3214 aa5.65□□□□□ -1.51
Vcan-202ENSMUST00000109544 Zfhx3Q61329 3726 aa5.64□□□□□ -1.51
Vcan-202ENSMUST00000109544 Muc2Q80Z19 2680 aa5.64□□□□□ -1.51
Vcan-202ENSMUST00000109544 Krtap10-4Q08EG8 221 aa5.63□□□□□ -1.51
Vcan-202ENSMUST00000109544 Ash1lQ99MY8 2958 aa5.6□□□□□ -1.51
Vcan-202ENSMUST00000109544 Krtap10-10A0A1W2P7T6 217 aa5.58□□□□□ -1.52
Vcan-202ENSMUST00000109544 Gm17402F6Z0L5 76 aa5.57□□□□□ -1.52
Vcan-202ENSMUST00000109544 Bod1lE9Q6J5 3032 aa5.57□□□□□ -1.52
Vcan-202ENSMUST00000109544 2310079G19RikQ9D6L6 185 aa5.56□□□□□ -1.52
Vcan-202ENSMUST00000109544 Igfn1Q3KNY0 2849 aa5.55□□□□□ -1.52
Vcan-202ENSMUST00000109544 Gm17416Q30KP4 66 aa5.55□□□□□ -1.52
Vcan-202ENSMUST00000109544 Col6a5A6H584 2640 aa5.54□□□□□ -1.52
Vcan-202ENSMUST00000109544 Cfap54Q8C6S9 3106 aa5.54□□□□□ -1.52
Vcan-202ENSMUST00000109544 FryE9Q8I9 3020 aa5.53□□□□□ -1.52
Vcan-202ENSMUST00000109544 FcgbpE9Q0B5 2583 aa5.52□□□□□ -1.53
Vcan-202ENSMUST00000109544 2310057N15RikQ9D6T8 200 aa5.51□□□□□ -1.53
Vcan-202ENSMUST00000109544 Szt2A2A9C3 3431 aa5.51□□□□□ -1.53
Vcan-202ENSMUST00000109544 TgO08710 2766 aa5.48□□□□□ -1.53
Vcan-202ENSMUST00000109544 Cdh23Q99PF4 3354 aa5.47□□□□□ -1.53
Vcan-202ENSMUST00000109544 Ranbp2Q9ERU9 3053 aaKnown RBP5.47□□□□□ -1.53
Vcan-202ENSMUST00000109544 Itpr2Q9Z329 2701 aa5.46□□□□□ -1.53
Vcan-202ENSMUST00000109544 Prm2P07978 107 aa5.46□□□□□ -1.53
Vcan-202ENSMUST00000109544 Hivep1Q03172 2688 aa5.46□□□□□ -1.54
Vcan-202ENSMUST00000109544 Ubr5Q80TP3 2792 aa5.45□□□□□ -1.54
Vcan-202ENSMUST00000109544 Nbeal2Q6ZQA0 2742 aa5.44□□□□□ -1.54
Vcan-202ENSMUST00000109544 Pkd1l1Q8R526 2615 aa5.43□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 59.3 ms