RNA–Protein interactions for RNA: ENSMUST00000087050.6

Col4a4-201, Transcript of Collagen alpha-4(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a4, Length 10,108 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4-201ENSMUST00000087050 Ash1lQ99MY8 2958 aa6.39□□□□□ -1.39
Col4a4-201ENSMUST00000087050 DspE9Q557 2883 aaKnown RBP6.38□□□□□ -1.39
Col4a4-201ENSMUST00000087050 Defb9Q8R2I6 67 aa6.38□□□□□ -1.39
Col4a4-201ENSMUST00000087050 Gm3880A0A1B0GSB3 72 aa6.38□□□□□ -1.39
Col4a4-201ENSMUST00000087050 Zzef1Q5SSH7 2924 aa6.37□□□□□ -1.39
Col4a4-201ENSMUST00000087050 Gm3646F6S692 53 aa6.35□□□□□ -1.39
Col4a4-201ENSMUST00000087050 Jbts17Q8CE72 3214 aa6.34□□□□□ -1.39
Col4a4-201ENSMUST00000087050 Smim29Q8R043 75 aa6.34□□□□□ -1.39
Col4a4-201ENSMUST00000087050 6030445D17RikE9Q8F9 148 aa6.33□□□□□ -1.4
Col4a4-201ENSMUST00000087050 FcgbpE9Q0B5 2583 aa6.32□□□□□ -1.4
Col4a4-201ENSMUST00000087050 FlncQ8VHX6 2726 aaKnown RBP6.32□□□□□ -1.4
Col4a4-201ENSMUST00000087050 Gm10065F6TJM2 114 aa6.32□□□□□ -1.4
Col4a4-201ENSMUST00000087050 Fbn2Q61555 2907 aa6.32□□□□□ -1.4
Col4a4-201ENSMUST00000087050 Gm3285A0A1W2P7U0 201 aa6.31□□□□□ -1.4
Col4a4-201ENSMUST00000087050 1700042G07RikB1AUF7 90 aa6.31□□□□□ -1.4
Col4a4-201ENSMUST00000087050 Plac8Q9JI48 112 aa6.31□□□□□ -1.4
Col4a4-201ENSMUST00000087050 Ep400Q8CHI8 3072 aaKnown RBP6.31□□□□□ -1.4
Col4a4-201ENSMUST00000087050 Gm9821Q8K076 103 aa6.31□□□□□ -1.4
Col4a4-201ENSMUST00000087050 NbdyA0A0N4SUI7 68 aa6.3□□□□□ -1.4
Col4a4-201ENSMUST00000087050 Srrm2Q8BTI8 2703 aaKnown RBP6.29□□□□□ -1.4
Col4a4-201ENSMUST00000087050 KalrnA2CG49 2964 aa6.28□□□□□ -1.4
Col4a4-201ENSMUST00000087050 Cep350E9Q309 3095 aa6.28□□□□□ -1.4
Col4a4-201ENSMUST00000087050 Igfn1Q3KNY0 2849 aa6.26□□□□□ -1.41
Col4a4-201ENSMUST00000087050 Gm4491E0CX42 125 aa6.25□□□□□ -1.41
Col4a4-201ENSMUST00000087050 Odf3bQ5M8M2 238 aa6.25□□□□□ -1.41
Col4a4-201ENSMUST00000087050 OxtP35454 125 aa6.25□□□□□ -1.41
Col4a4-201ENSMUST00000087050 Cystm1Q8K353 104 aa6.24□□□□□ -1.41
Col4a4-201ENSMUST00000087050 UtrnE9Q6R7 3430 aa6.23□□□□□ -1.41
Col4a4-201ENSMUST00000087050 Gm10139O88245 57 aa6.22□□□□□ -1.41
Col4a4-201ENSMUST00000087050 Gm37013Q8K491 104 aa6.22□□□□□ -1.41
Col4a4-201ENSMUST00000087050 Anapc11Q9CPX9 84 aa6.22□□□□□ -1.41
Col4a4-201ENSMUST00000087050 4933415A04RikQ9D443 101 aa6.21□□□□□ -1.42
Col4a4-201ENSMUST00000087050 Spink7Q6IE32 76 aa6.21□□□□□ -1.42
Col4a4-201ENSMUST00000087050 Nf1Q04690 2841 aa6.2□□□□□ -1.42
Col4a4-201ENSMUST00000087050 Dmxl1Q6PNC0 3013 aa6.18□□□□□ -1.42
Col4a4-201ENSMUST00000087050 Tenm1Q9WTS4 2731 aa6.17□□□□□ -1.42
Col4a4-201ENSMUST00000087050 Romo1P60603 79 aa6.17□□□□□ -1.42
Col4a4-201ENSMUST00000087050 SmcpP15265 143 aa6.17□□□□□ -1.42
Col4a4-201ENSMUST00000087050 Gm11565A2A4M7 156 aa6.16□□□□□ -1.42
Col4a4-201ENSMUST00000087050 Chd9Q8BYH8 2885 aa6.16□□□□□ -1.42
Col4a4-201ENSMUST00000087050 MgaA2AWL7 3003 aaKnown RBP6.16□□□□□ -1.42
Col4a4-201ENSMUST00000087050 Camk2n1Q6QWF9 78 aa6.15□□□□□ -1.43
Col4a4-201ENSMUST00000087050 Prune2Q52KR3 3084 aa6.14□□□□□ -1.43
Col4a4-201ENSMUST00000087050 FrylF8VQ05 3007 aa6.14□□□□□ -1.43
Col4a4-201ENSMUST00000087050 BptfA2A654 3036 aaKnown RBP6.13□□□□□ -1.43
Col4a4-201ENSMUST00000087050 Chd7A2AJK6 2986 aaKnown RBP6.12□□□□□ -1.43
Col4a4-201ENSMUST00000087050 Gm10320E9PW43 113 aa6.12□□□□□ -1.43
Col4a4-201ENSMUST00000087050 Sprr1aQ62266 144 aa6.11□□□□□ -1.43
Col4a4-201ENSMUST00000087050 Rpl37Q9D823 97 aa6.11□□□□□ -1.43
Col4a4-201ENSMUST00000087050 Gm16253D3Z167 63 aa6.1□□□□□ -1.43
Col4a4-201ENSMUST00000087050 TgO08710 2766 aa6.1□□□□□ -1.43
Col4a4-201ENSMUST00000087050 Lama2Q60675 3118 aaKnown RBP6.08□□□□□ -1.44
Col4a4-201ENSMUST00000087050 Pdzd2E9Q1M1 2796 aa6.08□□□□□ -1.44
Col4a4-201ENSMUST00000087050 LrbaQ9ESE1 2856 aa6.07□□□□□ -1.44
Col4a4-201ENSMUST00000087050 A730071L15RikQ8C4X0 137 aa6.04□□□□□ -1.44
Col4a4-201ENSMUST00000087050 Fam229aB2KGE5 128 aa6.04□□□□□ -1.44
Col4a4-201ENSMUST00000087050 Tenm3Q9WTS6 2715 aa6.04□□□□□ -1.44
Col4a4-201ENSMUST00000087050 Cox6b2Q80ZN9 88 aa6.02□□□□□ -1.45
Col4a4-201ENSMUST00000087050 Gm10382Q3V0T5 144 aa6.01□□□□□ -1.45
Col4a4-201ENSMUST00000087050 Ranbp2Q9ERU9 3053 aaKnown RBP5.99□□□□□ -1.45
Col4a4-201ENSMUST00000087050 Celsr2Q9R0M0 2920 aa5.98□□□□□ -1.45
Col4a4-201ENSMUST00000087050 Gm3250E9Q1M3 230 aa5.97□□□□□ -1.45
Col4a4-201ENSMUST00000087050 Trank1Q8BV79 2999 aa5.97□□□□□ -1.45
Col4a4-201ENSMUST00000087050 Myo15bI7HPW8 3033 aa5.97□□□□□ -1.45
Col4a4-201ENSMUST00000087050 Krtap29-1A2A5X4 342 aa5.96□□□□□ -1.46
Col4a4-201ENSMUST00000087050 Usp34Q6ZQ93 3582 aa5.96□□□□□ -1.46
Col4a4-201ENSMUST00000087050 Sec61bQ9CQS8 96 aaKnown RBP5.96□□□□□ -1.46
Col4a4-201ENSMUST00000087050 FryE9Q8I9 3020 aa5.95□□□□□ -1.46
Col4a4-201ENSMUST00000087050 NbeaQ9EPN1 2936 aa5.94□□□□□ -1.46
Col4a4-201ENSMUST00000087050 BC029722A0A0N4SW31 51 aa5.94□□□□□ -1.46
Col4a4-201ENSMUST00000087050 Krtap15-1Q9QZU5 150 aa5.94□□□□□ -1.46
Col4a4-201ENSMUST00000087050 Vps13aQ5H8C4 3166 aa5.93□□□□□ -1.46
Col4a4-201ENSMUST00000087050 Gm5767A0A0J9YTU8 78 aa5.92□□□□□ -1.46
Col4a4-201ENSMUST00000087050 Gm2310J3QNJ2 377 aa5.91□□□□□ -1.46
Col4a4-201ENSMUST00000087050 Rps29P62274 56 aa5.9□□□□□ -1.46
Col4a4-201ENSMUST00000087050 TrioQ0KL02 3102 aa5.89□□□□□ -1.47
Col4a4-201ENSMUST00000087050 Gm19426M0QWC7 77 aa5.88□□□□□ -1.47
Col4a4-201ENSMUST00000087050 Lama3Q61789 3330 aa5.85□□□□□ -1.47
Col4a4-201ENSMUST00000087050 Mki67E9PVX6 3177 aaKnown RBP5.84□□□□□ -1.48
Col4a4-201ENSMUST00000087050 Dmxl2Q8BPN8 3032 aa5.84□□□□□ -1.48
Col4a4-201ENSMUST00000087050 Ndufaf8A2AMZ4 74 aa5.83□□□□□ -1.48
Col4a4-201ENSMUST00000087050 Gm40193A0A1B0GT39 78 aa5.81□□□□□ -1.48
Col4a4-201ENSMUST00000087050 Lama1P19137 3084 aa5.8□□□□□ -1.48
Col4a4-201ENSMUST00000087050 Gm7173A0A0G2JEB6 3132 aa5.8□□□□□ -1.48
Col4a4-201ENSMUST00000087050 Gm9112A2AI92 75 aa5.76□□□□□ -1.49
Col4a4-201ENSMUST00000087050 2310050C09RikG5E8Z3 280 aa5.76□□□□□ -1.49
Col4a4-201ENSMUST00000087050 Cfap54Q8C6S9 3106 aa5.76□□□□□ -1.49
Col4a4-201ENSMUST00000087050 Megf8P60882 2789 aa5.76□□□□□ -1.49
Col4a4-201ENSMUST00000087050 AtmQ62388 3066 aa5.75□□□□□ -1.49
Col4a4-201ENSMUST00000087050 Wdfy4E9Q2M9 3149 aa5.73□□□□□ -1.49
Col4a4-201ENSMUST00000087050 Krtap14O08640 167 aa5.73□□□□□ -1.49
Col4a4-201ENSMUST00000087050 Celsr1O35161 3034 aa5.73□□□□□ -1.49
Col4a4-201ENSMUST00000087050 VwfQ8CIZ8 2813 aa5.72□□□□□ -1.49
Col4a4-201ENSMUST00000087050 Gm3233E9Q2H5 230 aa5.71□□□□□ -1.5
Col4a4-201ENSMUST00000087050 Rev3lQ61493 3122 aa5.7□□□□□ -1.5
Col4a4-201ENSMUST00000087050 Gm21887J3QQ04 176 aa5.69□□□□□ -1.5
Col4a4-201ENSMUST00000087050 Cdh23Q99PF4 3354 aa5.68□□□□□ -1.5
Col4a4-201ENSMUST00000087050 Lelp1Q9DAE3 120 aa5.67□□□□□ -1.5
Col4a4-201ENSMUST00000087050 Frem2Q6NVD0 3160 aa5.66□□□□□ -1.5
Col4a4-201ENSMUST00000087050 Gm7138L7N2C3 230 aa5.65□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 102.2 ms