RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 PscaP57096 123 aa14.41□□□□□ -0.1
Cln6-201ENSMUST00000034776 MplkipQ9D011 178 aa14.4□□□□□ -0.1
Cln6-201ENSMUST00000034776 Hist1h4aP62806 103 aaKnown RBP14.39□□□□□ -0.11
Cln6-201ENSMUST00000034776 Ly6g6cQ9Z1Q4 126 aa14.39□□□□□ -0.11
Cln6-201ENSMUST00000034776 Defb9Q8R2I6 67 aa14.39□□□□□ -0.11
Cln6-201ENSMUST00000034776 Dnah7aE9Q0T8 4024 aa14.39□□□□□ -0.11
Cln6-201ENSMUST00000034776 Wfdc10Q3V2J9 124 aa14.38□□□□□ -0.11
Cln6-201ENSMUST00000034776 Gm10401E9Q3K6 71 aa14.38□□□□□ -0.11
Cln6-201ENSMUST00000034776 Defa7P50705 93 aa14.37□□□□□ -0.11
Cln6-201ENSMUST00000034776 Gm10139O88245 57 aa14.36□□□□□ -0.11
Cln6-201ENSMUST00000034776 Krtap29-1A2A5X4 342 aa14.35□□□□□ -0.11
Cln6-201ENSMUST00000034776 Dnah7cA0A087WR13 4024 aa14.34□□□□□ -0.11
Cln6-201ENSMUST00000034776 Cystm1Q8K353 104 aa14.34□□□□□ -0.11
Cln6-201ENSMUST00000034776 AI606181Q8C7B9 129 aa14.33□□□□□ -0.12
Cln6-201ENSMUST00000034776 Gm17689B3GLJ4 109 aa14.3□□□□□ -0.12
Cln6-201ENSMUST00000034776 Prr13Q9CQJ5 137 aa14.3□□□□□ -0.12
Cln6-201ENSMUST00000034776 A330070K13RikQ8CA53 115 aa14.3□□□□□ -0.12
Cln6-201ENSMUST00000034776 6030445D17RikE9Q8F9 148 aa14.29□□□□□ -0.12
Cln6-201ENSMUST00000034776 Defa28D3Z1V9 94 aa14.29□□□□□ -0.12
Cln6-201ENSMUST00000034776 ScxQ64124 207 aa14.27□□□□□ -0.12
Cln6-201ENSMUST00000034776 Gm12353A2AGJ4 60 aa14.27□□□□□ -0.13
Cln6-201ENSMUST00000034776 Wfdc13Q5DQQ6 81 aa14.24□□□□□ -0.13
Cln6-201ENSMUST00000034776 HrnrQ8VHD8 2496 aa14.24□□□□□ -0.13
Cln6-201ENSMUST00000034776 Igkv1-110A0A0B4J1I0 119 aa14.23□□□□□ -0.13
Cln6-201ENSMUST00000034776 Gm10570F6VB42 170 aa14.23□□□□□ -0.13
Cln6-201ENSMUST00000034776 Q8K1L6 76 aa14.23□□□□□ -0.13
Cln6-201ENSMUST00000034776 7530416G11RikJ3QJX6 159 aa14.21□□□□□ -0.13
Cln6-201ENSMUST00000034776 Igkv3-4A0A140T8Q4 119 aa14.2□□□□□ -0.14
Cln6-201ENSMUST00000034776 1700018G05RikA0A1B0GSI2 66 aa14.2□□□□□ -0.14
Cln6-201ENSMUST00000034776 Odf3bQ5M8M2 238 aa14.2□□□□□ -0.14
Cln6-201ENSMUST00000034776 Gm37013Q8K491 104 aa14.2□□□□□ -0.14
Cln6-201ENSMUST00000034776 Ube2aQ9Z255 152 aa14.2□□□□□ -0.14
Cln6-201ENSMUST00000034776 Gm27235Q3UW50 83 aa14.18□□□□□ -0.14
Cln6-201ENSMUST00000034776 Defa25Q5G864 92 aa14.18□□□□□ -0.14
Cln6-201ENSMUST00000034776 C130032M10RikQ8C888 123 aa14.18□□□□□ -0.14
Cln6-201ENSMUST00000034776 Dnah5Q8VHE6 4621 aa14.17□□□□□ -0.14
Cln6-201ENSMUST00000034776 Mrpl34Q99N91 92 aa14.17□□□□□ -0.14
Cln6-201ENSMUST00000034776 Q8BT88 171 aa14.15□□□□□ -0.14
Cln6-201ENSMUST00000034776 Gm44790A0A0N4SV91 103 aa14.15□□□□□ -0.14
Cln6-201ENSMUST00000034776 Apoc4Q61268 124 aa14.14□□□□□ -0.15
Cln6-201ENSMUST00000034776 Chchd10Q7TNL9 138 aa14.14□□□□□ -0.15
Cln6-201ENSMUST00000034776 Vps13dB1ART2 4390 aa14.14□□□□□ -0.15
Cln6-201ENSMUST00000034776 Fam229bQ8CF36 80 aa14.13□□□□□ -0.15
Cln6-201ENSMUST00000034776 NbdyA0A0N4SUI7 68 aa14.12□□□□□ -0.15
Cln6-201ENSMUST00000034776 Gm10642Q3TWM1 71 aa14.12□□□□□ -0.15
Cln6-201ENSMUST00000034776 Gpr15lA0A0B4J1N3 78 aa14.11□□□□□ -0.15
Cln6-201ENSMUST00000034776 Igkv3-7A0A0G2JE31 119 aa14.11□□□□□ -0.15
Cln6-201ENSMUST00000034776 Krtap10-4Q08EG8 221 aa14.11□□□□□ -0.15
Cln6-201ENSMUST00000034776 Serp2Q6TAW2 65 aa14.09□□□□□ -0.15
Cln6-201ENSMUST00000034776 4930518I15RikQ3V2W7 57 aa14.07□□□□□ -0.16
Cln6-201ENSMUST00000034776 Pcp4P63054 62 aa14.06□□□□□ -0.16
Cln6-201ENSMUST00000034776 Adm2Q7TNK8 150 aa14.06□□□□□ -0.16
Cln6-201ENSMUST00000034776 UqcrqQ9CQ69 82 aa14.06□□□□□ -0.16
Cln6-201ENSMUST00000034776 Ndufc1Q9CQY9 76 aa14.06□□□□□ -0.16
Cln6-201ENSMUST00000034776 1600014C23RikQ9DAX4 101 aa14.06□□□□□ -0.16
Cln6-201ENSMUST00000034776 Igkv3-5A0A140T8M6 119 aa14.06□□□□□ -0.16
Cln6-201ENSMUST00000034776 Gm28230A0A0A0MQ91 144 aa14.05□□□□□ -0.16
Cln6-201ENSMUST00000034776 Igkv3-10A0A0G2JGN0 119 aa14.05□□□□□ -0.16
Cln6-201ENSMUST00000034776 Fam19a3Q7TPG6 132 aa14.05□□□□□ -0.16
Cln6-201ENSMUST00000034776 Naa38Q9D2U5 125 aa14.05□□□□□ -0.16
Cln6-201ENSMUST00000034776 Dnah2P0C6F1 4456 aa14.04□□□□□ -0.16
Cln6-201ENSMUST00000034776 OxtP35454 125 aa14.03□□□□□ -0.16
Cln6-201ENSMUST00000034776 D130052B06RikQ3UW13 202 aa14.02□□□□□ -0.16
Cln6-201ENSMUST00000034776 Gm21886J3QJU9 214 aa14.01□□□□□ -0.17
Cln6-201ENSMUST00000034776 Tnp2P11378 117 aa14□□□□□ -0.17
Cln6-201ENSMUST00000034776 Gm28539A0A087WSL9 92 aa13.97□□□□□ -0.17
Cln6-201ENSMUST00000034776 Igkv8-19A0A0G2JFN8 121 aa13.97□□□□□ -0.17
Cln6-201ENSMUST00000034776 Prr15lQ8JZM2 100 aa13.94□□□□□ -0.18
Cln6-201ENSMUST00000034776 Krtap14O08640 167 aa13.93□□□□□ -0.18
Cln6-201ENSMUST00000034776 Pkd1O08852 4293 aa13.93□□□□□ -0.18
Cln6-201ENSMUST00000034776 Gm20726G3UX18 150 aa13.91□□□□□ -0.18
Cln6-201ENSMUST00000034776 Defb39Q70KL3 74 aa13.9□□□□□ -0.18
Cln6-201ENSMUST00000034776 ApobE9Q414 4505 aa13.89□□□□□ -0.19
Cln6-201ENSMUST00000034776 SmcpP15265 143 aa13.89□□□□□ -0.19
Cln6-201ENSMUST00000034776 Znf706Q9D115 76 aaKnown RBP13.89□□□□□ -0.19
Cln6-201ENSMUST00000034776 GhrhP16043 103 aa13.88□□□□□ -0.19
Cln6-201ENSMUST00000034776 Defa21Q8C1P2 93 aa13.87□□□□□ -0.19
Cln6-201ENSMUST00000034776 Gm20604F8WIA3 75 aa13.87□□□□□ -0.19
Cln6-201ENSMUST00000034776 Ccdc179J3QM76 67 aa13.86□□□□□ -0.19
Cln6-201ENSMUST00000034776 Cypt14J3QPF7 87 aa13.85□□□□□ -0.19
Cln6-201ENSMUST00000034776 Krtap13O88375 197 aa13.84□□□□□ -0.19
Cln6-201ENSMUST00000034776 Hectd4E9Q2E4 4418 aa13.84□□□□□ -0.19
Cln6-201ENSMUST00000034776 Reg3aO09037 175 aa13.83□□□□□ -0.2
Cln6-201ENSMUST00000034776 Gm28374F6SG70 93 aa13.82□□□□□ -0.2
Cln6-201ENSMUST00000034776 Rpl37aP61514 92 aa13.82□□□□□ -0.2
Cln6-201ENSMUST00000034776 Anapc11Q9CPX9 84 aa13.8□□□□□ -0.2
Cln6-201ENSMUST00000034776 B230307C23RikQ8BLB2 64 aa13.79□□□□□ -0.2
Cln6-201ENSMUST00000034776 Spink8Q09TK9 105 aa13.75□□□□□ -0.21
Cln6-201ENSMUST00000034776 BikO70337 150 aa13.75□□□□□ -0.21
Cln6-201ENSMUST00000034776 Bean1Q9EQG5 255 aa13.75□□□□□ -0.21
Cln6-201ENSMUST00000034776 Gm2696A0A1W2P709 240 aa13.73□□□□□ -0.21
Cln6-201ENSMUST00000034776 Stard9Q80TF6 4561 aa13.72□□□□□ -0.21
Cln6-201ENSMUST00000034776 Krtap10-10A0A1W2P7T6 217 aa13.72□□□□□ -0.21
Cln6-201ENSMUST00000034776 Scgb1b2O35176 93 aa13.72□□□□□ -0.21
Cln6-201ENSMUST00000034776 Lrp1bQ9JI18 4599 aa13.69□□□□□ -0.22
Cln6-201ENSMUST00000034776 Smim20D3Z7Q2 69 aa13.68□□□□□ -0.22
Cln6-201ENSMUST00000034776 Gm16253D3Z167 63 aa13.67□□□□□ -0.22
Cln6-201ENSMUST00000034776 Gm2310J3QNJ2 377 aa13.67□□□□□ -0.22
Cln6-201ENSMUST00000034776 Samd13D3YUG0 102 aa13.66□□□□□ -0.22
Cln6-201ENSMUST00000034776 Tmem258P61166 79 aa13.65□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 123.5 ms