RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Fbn2Q61555 2907 aa10.59□□□□□ -0.71
Ubfd1-201ENSMUST00000033158 Fam229bQ8CF36 80 aa10.58□□□□□ -0.72
Ubfd1-201ENSMUST00000033158 Ubr5Q80TP3 2792 aa10.57□□□□□ -0.72
Ubfd1-201ENSMUST00000033158 Smim29Q8R043 75 aa10.57□□□□□ -0.72
Ubfd1-201ENSMUST00000033158 Cdh23Q99PF4 3354 aa10.56□□□□□ -0.72
Ubfd1-201ENSMUST00000033158 MgaA2AWL7 3003 aaKnown RBP10.55□□□□□ -0.72
Ubfd1-201ENSMUST00000033158 Phxr5P08399 672 aa10.55□□□□□ -0.72
Ubfd1-201ENSMUST00000033158 Dmxl1Q6PNC0 3013 aa10.55□□□□□ -0.72
Ubfd1-201ENSMUST00000033158 Gm26620Q9CY65 116 aa10.54□□□□□ -0.72
Ubfd1-201ENSMUST00000033158 Mp68P56379 58 aa10.53□□□□□ -0.72
Ubfd1-201ENSMUST00000033158 Vps13aQ5H8C4 3166 aa10.52□□□□□ -0.72
Ubfd1-201ENSMUST00000033158 Gm7137J3QMW1 236 aa10.5□□□□□ -0.73
Ubfd1-201ENSMUST00000033158 Ash1lQ99MY8 2958 aa10.49□□□□□ -0.73
Ubfd1-201ENSMUST00000033158 Itpr3P70227 2670 aa10.49□□□□□ -0.73
Ubfd1-201ENSMUST00000033158 Cypt14J3QPF7 87 aa10.49□□□□□ -0.73
Ubfd1-201ENSMUST00000033158 Rnase13Q5GAM7 153 aa10.48□□□□□ -0.73
Ubfd1-201ENSMUST00000033158 Gm10065F6TJM2 114 aa10.47□□□□□ -0.73
Ubfd1-201ENSMUST00000033158 Gm10643Q3URG9 111 aa10.47□□□□□ -0.73
Ubfd1-201ENSMUST00000033158 Igsf10Q3V1M1 2594 aa10.47□□□□□ -0.73
Ubfd1-201ENSMUST00000033158 Gm10320E9PW43 113 aa10.47□□□□□ -0.73
Ubfd1-201ENSMUST00000033158 Cfap54Q8C6S9 3106 aa10.47□□□□□ -0.73
Ubfd1-201ENSMUST00000033158 NbdyA0A0N4SUI7 68 aa10.45□□□□□ -0.74
Ubfd1-201ENSMUST00000033158 2310034C09RikQ9D746 214 aa10.43□□□□□ -0.74
Ubfd1-201ENSMUST00000033158 AspmQ8CJ27 3122 aa10.42□□□□□ -0.74
Ubfd1-201ENSMUST00000033158 Bod1lE9Q6J5 3032 aa10.4□□□□□ -0.74
Ubfd1-201ENSMUST00000033158 Tep1P97499 2629 aa10.39□□□□□ -0.75
Ubfd1-201ENSMUST00000033158 Gm21798J3QNU5 87 aa10.38□□□□□ -0.75
Ubfd1-201ENSMUST00000033158 9530053A07RikE9PVG8 2581 aa10.37□□□□□ -0.75
Ubfd1-201ENSMUST00000033158 Pkd1l1Q8R526 2615 aa10.33□□□□□ -0.76
Ubfd1-201ENSMUST00000033158 Szt2A2A9C3 3431 aa10.32□□□□□ -0.76
Ubfd1-201ENSMUST00000033158 Stab2Q8R4U0 2559 aa10.31□□□□□ -0.76
Ubfd1-201ENSMUST00000033158 Lrrc37aB1AWG4 3215 aa10.29□□□□□ -0.76
Ubfd1-201ENSMUST00000033158 Col6a5A6H584 2640 aa10.28□□□□□ -0.76
Ubfd1-201ENSMUST00000033158 6030445D17RikE9Q8F9 148 aa10.28□□□□□ -0.76
Ubfd1-201ENSMUST00000033158 Muc2Q80Z19 2680 aa10.28□□□□□ -0.76
Ubfd1-201ENSMUST00000033158 Nbeal2Q6ZQA0 2742 aa10.27□□□□□ -0.76
Ubfd1-201ENSMUST00000033158 Sprr1aQ62266 144 aa10.27□□□□□ -0.77
Ubfd1-201ENSMUST00000033158 Gm10139O88245 57 aa10.26□□□□□ -0.77
Ubfd1-201ENSMUST00000033158 Odf3bQ5M8M2 238 aa10.23□□□□□ -0.77
Ubfd1-201ENSMUST00000033158 Cystm1Q8K353 104 aa10.22□□□□□ -0.77
Ubfd1-201ENSMUST00000033158 Ranbp2Q9ERU9 3053 aaKnown RBP10.22□□□□□ -0.77
Ubfd1-201ENSMUST00000033158 Gm9821Q8K076 103 aa10.21□□□□□ -0.78
Ubfd1-201ENSMUST00000033158 Gm17349F7BGH6 99 aa10.17□□□□□ -0.78
Ubfd1-201ENSMUST00000033158 Unc80Q8BLN6 3261 aa10.16□□□□□ -0.78
Ubfd1-201ENSMUST00000033158 A730071L15RikQ8C4X0 137 aa10.16□□□□□ -0.78
Ubfd1-201ENSMUST00000033158 Gm36176A0A1W2P8D5 158 aa10.15□□□□□ -0.79
Ubfd1-201ENSMUST00000033158 Gm9508A0A1W2P7W0 230 aa10.14□□□□□ -0.79
Ubfd1-201ENSMUST00000033158 Gm4491E0CX42 125 aa10.14□□□□□ -0.79
Ubfd1-201ENSMUST00000033158 Hivep1Q03172 2688 aa10.13□□□□□ -0.79
Ubfd1-201ENSMUST00000033158 Tex15F8VPN2 2785 aa10.11□□□□□ -0.79
Ubfd1-201ENSMUST00000033158 Gm9955Q8CEJ8 102 aa10.1□□□□□ -0.79
Ubfd1-201ENSMUST00000033158 CriptO70333 101 aa10.1□□□□□ -0.79
Ubfd1-201ENSMUST00000033158 Gm16253D3Z167 63 aa10.08□□□□□ -0.8
Ubfd1-201ENSMUST00000033158 Gm3880A0A1B0GSB3 72 aa10.07□□□□□ -0.8
Ubfd1-201ENSMUST00000033158 FryE9Q8I9 3020 aa10.06□□□□□ -0.8
Ubfd1-201ENSMUST00000033158 Celsr1O35161 3034 aa10.05□□□□□ -0.8
Ubfd1-201ENSMUST00000033158 Gm20538F6Z9R1 75 aa10.03□□□□□ -0.8
Ubfd1-201ENSMUST00000033158 Col6a3E9PWQ3 3284 aa10.02□□□□□ -0.81
Ubfd1-201ENSMUST00000033158 BptfA2A654 3036 aaKnown RBP10.01□□□□□ -0.81
Ubfd1-201ENSMUST00000033158 Gm37013Q8K491 104 aa9.99□□□□□ -0.81
Ubfd1-201ENSMUST00000033158 Pla2g10Q9QXX3 151 aa9.97□□□□□ -0.81
Ubfd1-201ENSMUST00000033158 Spink7Q6IE32 76 aa9.96□□□□□ -0.81
Ubfd1-201ENSMUST00000033158 Krtap15-1Q9QZU5 150 aa9.95□□□□□ -0.82
Ubfd1-201ENSMUST00000033158 FrylF8VQ05 3007 aa9.93□□□□□ -0.82
Ubfd1-201ENSMUST00000033158 NbeaQ9EPN1 2936 aa9.92□□□□□ -0.82
Ubfd1-201ENSMUST00000033158 Wdfy4E9Q2M9 3149 aa9.92□□□□□ -0.82
Ubfd1-201ENSMUST00000033158 Krtap29-1A2A5X4 342 aa9.91□□□□□ -0.82
Ubfd1-201ENSMUST00000033158 Dmxl2Q8BPN8 3032 aa9.9□□□□□ -0.82
Ubfd1-201ENSMUST00000033158 Lama1P19137 3084 aa9.9□□□□□ -0.82
Ubfd1-201ENSMUST00000033158 DspE9Q557 2883 aaKnown RBP9.89□□□□□ -0.83
Ubfd1-201ENSMUST00000033158 Frem2Q6NVD0 3160 aa9.89□□□□□ -0.83
Ubfd1-201ENSMUST00000033158 FcgbpE9Q0B5 2583 aa9.84□□□□□ -0.83
Ubfd1-201ENSMUST00000033158 Celsr3Q91ZI0 3301 aa9.83□□□□□ -0.84
Ubfd1-201ENSMUST00000033158 Itpr2Q9Z329 2701 aa9.83□□□□□ -0.84
Ubfd1-201ENSMUST00000033158 Brca2P97929 3329 aa9.82□□□□□ -0.84
Ubfd1-201ENSMUST00000033158 Dchs2A0A0A6YW72 3346 aa9.81□□□□□ -0.84
Ubfd1-201ENSMUST00000033158 Gm3646F6S692 53 aa9.79□□□□□ -0.84
Ubfd1-201ENSMUST00000033158 Krtap13O88375 197 aa9.79□□□□□ -0.84
Ubfd1-201ENSMUST00000033158 VcanQ62059 3357 aa9.78□□□□□ -0.84
Ubfd1-201ENSMUST00000033158 2310050C09RikG5E8Z3 280 aa9.77□□□□□ -0.85
Ubfd1-201ENSMUST00000033158 Adgrg4B7ZCC9 3073 aa9.76□□□□□ -0.85
Ubfd1-201ENSMUST00000033158 Utp20Q5XG71 2788 aaKnown RBP9.75□□□□□ -0.85
Ubfd1-201ENSMUST00000033158 Fam229aB2KGE5 128 aa9.75□□□□□ -0.85
Ubfd1-201ENSMUST00000033158 Igfn1Q3KNY0 2849 aa9.74□□□□□ -0.85
Ubfd1-201ENSMUST00000033158 Gm5767A0A0J9YTU8 78 aa9.73□□□□□ -0.85
Ubfd1-201ENSMUST00000033158 FlncQ8VHX6 2726 aaKnown RBP9.7□□□□□ -0.86
Ubfd1-201ENSMUST00000033158 Gm9507D3Z5T3 223 aa9.7□□□□□ -0.86
Ubfd1-201ENSMUST00000033158 2310061N02RikQ9D6S9 174 aa9.7□□□□□ -0.86
Ubfd1-201ENSMUST00000033158 Sec61bQ9CQS8 96 aaKnown RBP9.69□□□□□ -0.86
Ubfd1-201ENSMUST00000033158 Krtap14O08640 167 aa9.65□□□□□ -0.87
Ubfd1-201ENSMUST00000033158 Rpl37Q9D823 97 aa9.64□□□□□ -0.87
Ubfd1-201ENSMUST00000033158 TgO08710 2766 aa9.63□□□□□ -0.87
Ubfd1-201ENSMUST00000033158 Zzef1Q5SSH7 2924 aa9.61□□□□□ -0.87
Ubfd1-201ENSMUST00000033158 Camk2n1Q6QWF9 78 aa9.61□□□□□ -0.87
Ubfd1-201ENSMUST00000033158 Gm2310J3QNJ2 377 aa9.6□□□□□ -0.87
Ubfd1-201ENSMUST00000033158 Srrm2Q8BTI8 2703 aaKnown RBP9.58□□□□□ -0.88
Ubfd1-201ENSMUST00000033158 4933415A04RikQ9D443 101 aa9.57□□□□□ -0.88
Ubfd1-201ENSMUST00000033158 Krtap10-4Q08EG8 221 aa9.56□□□□□ -0.88
Ubfd1-201ENSMUST00000033158 Celsr2Q9R0M0 2920 aa9.56□□□□□ -0.88
Ubfd1-201ENSMUST00000033158 BC029722A0A0N4SW31 51 aa9.55□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 163.8 ms