RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Igkv4-92A0A0B4J1I2 117 aa13.32□□□□□ -0.28
Trim47-201ENSMUST00000021120 Elof1P60003 83 aa13.32□□□□□ -0.28
Trim47-201ENSMUST00000021120 Gm16485Q8C4B7 115 aa13.3□□□□□ -0.28
Trim47-201ENSMUST00000021120 Igkv8-28A0A0G2JE47 121 aa13.29□□□□□ -0.28
Trim47-201ENSMUST00000021120 P06320 134 aa13.29□□□□□ -0.28
Trim47-201ENSMUST00000021120 Gm9918Q8BUR5 174 aa13.27□□□□□ -0.28
Trim47-201ENSMUST00000021120 Fras1Q80T14 4010 aa13.27□□□□□ -0.29
Trim47-201ENSMUST00000021120 BC048502Q80Y74 154 aa13.26□□□□□ -0.29
Trim47-201ENSMUST00000021120 Ufsp1Q9CZP0 217 aa13.25□□□□□ -0.29
Trim47-201ENSMUST00000021120 Ly6g6cQ9Z1Q4 126 aa13.24□□□□□ -0.29
Trim47-201ENSMUST00000021120 Cdc42se1Q8BHL7 80 aa13.23□□□□□ -0.29
Trim47-201ENSMUST00000021120 Gm17577J3QNF7 156 aa13.23□□□□□ -0.29
Trim47-201ENSMUST00000021120 Gm7276Q3TYW4 209 aa13.23□□□□□ -0.29
Trim47-201ENSMUST00000021120 Cox7b2Q9D2H1 82 aa13.22□□□□□ -0.29
Trim47-201ENSMUST00000021120 Q8BT88 171 aa13.21□□□□□ -0.29
Trim47-201ENSMUST00000021120 Sox16Q62247 57 aa13.21□□□□□ -0.29
Trim47-201ENSMUST00000021120 Defb37Q7TMD2 62 aa13.2□□□□□ -0.3
Trim47-201ENSMUST00000021120 A730009L09RikA0A1B0GS82 72 aa13.2□□□□□ -0.3
Trim47-201ENSMUST00000021120 Gm5617Q91VN2 117 aa13.19□□□□□ -0.3
Trim47-201ENSMUST00000021120 Igkv1-88A0A140T8N1 120 aa13.19□□□□□ -0.3
Trim47-201ENSMUST00000021120 Igkv3-10A0A0G2JGN0 119 aa13.18□□□□□ -0.3
Trim47-201ENSMUST00000021120 A0A286YCN5 57 aa13.18□□□□□ -0.3
Trim47-201ENSMUST00000021120 Gm11011D3Z3L9 86 aa13.17□□□□□ -0.3
Trim47-201ENSMUST00000021120 AI606181Q8C7B9 129 aa13.17□□□□□ -0.3
Trim47-201ENSMUST00000021120 Cdk2ap2Q9CPY4 127 aa13.16□□□□□ -0.3
Trim47-201ENSMUST00000021120 Sprr2jO70561 109 aa13.15□□□□□ -0.3
Trim47-201ENSMUST00000021120 A330070K13RikQ8CA53 115 aa13.15□□□□□ -0.3
Trim47-201ENSMUST00000021120 Trav14-1A0A0G2JF94 121 aa13.15□□□□□ -0.31
Trim47-201ENSMUST00000021120 2310050C09RikG5E8Z3 280 aa13.13□□□□□ -0.31
Trim47-201ENSMUST00000021120 Sprr4Q8CGN8 76 aa13.13□□□□□ -0.31
Trim47-201ENSMUST00000021120 OxtP35454 125 aa13.12□□□□□ -0.31
Trim47-201ENSMUST00000021120 Gm10197F6QEY5 67 aa13.12□□□□□ -0.31
Trim47-201ENSMUST00000021120 4933415A04RikQ9D443 101 aa13.12□□□□□ -0.31
Trim47-201ENSMUST00000021120 PlecQ9QXS1 4691 aaKnown RBP13.11□□□□□ -0.31
Trim47-201ENSMUST00000021120 Camk2n2Q78WH7 79 aa13.09□□□□□ -0.31
Trim47-201ENSMUST00000021120 Gm10160F6Y577 67 aa13.08□□□□□ -0.32
Trim47-201ENSMUST00000021120 Igkv3-2A0A075B5P0 119 aa13.07□□□□□ -0.32
Trim47-201ENSMUST00000021120 Nupr2Q497P3 102 aa13.07□□□□□ -0.32
Trim47-201ENSMUST00000021120 Igkv1-122A0A140T8M9 119 aa13.06□□□□□ -0.32
Trim47-201ENSMUST00000021120 Sfta2E9PXB6 77 aa13.06□□□□□ -0.32
Trim47-201ENSMUST00000021120 Igkv3-12A0A140T8P0 119 aa13.05□□□□□ -0.32
Trim47-201ENSMUST00000021120 Smim29Q8R043 75 aa13.05□□□□□ -0.32
Trim47-201ENSMUST00000021120 Coa6Q8BGD8 79 aa13.04□□□□□ -0.32
Trim47-201ENSMUST00000021120 Dnah7aE9Q0T8 4024 aa13.04□□□□□ -0.32
Trim47-201ENSMUST00000021120 Cox6a2P43023 97 aa13.03□□□□□ -0.32
Trim47-201ENSMUST00000021120 Prr15lQ8JZM2 100 aa13.03□□□□□ -0.32
Trim47-201ENSMUST00000021120 U90926O08546 118 aa13.01□□□□□ -0.33
Trim47-201ENSMUST00000021120 Defb40Q70KL2 73 aa13.01□□□□□ -0.33
Trim47-201ENSMUST00000021120 C130032M10RikQ8C888 123 aa12.98□□□□□ -0.33
Trim47-201ENSMUST00000021120 A0A286YE02 88 aa12.97□□□□□ -0.33
Trim47-201ENSMUST00000021120 Gm37013Q8K491 104 aa12.95□□□□□ -0.34
Trim47-201ENSMUST00000021120 Dmac1Q9CQ00 111 aa12.94□□□□□ -0.34
Trim47-201ENSMUST00000021120 TgO08710 2766 aa12.94□□□□□ -0.34
Trim47-201ENSMUST00000021120 Mrpl34Q99N91 92 aa12.93□□□□□ -0.34
Trim47-201ENSMUST00000021120 Sprr1aQ62266 144 aa12.93□□□□□ -0.34
Trim47-201ENSMUST00000021120 Gm10837Q3UTT8 145 aa12.92□□□□□ -0.34
Trim47-201ENSMUST00000021120 Plac8Q9JI48 112 aa12.92□□□□□ -0.34
Trim47-201ENSMUST00000021120 PscaP57096 123 aa12.91□□□□□ -0.34
Trim47-201ENSMUST00000021120 P84750 121 aa12.9□□□□□ -0.34
Trim47-201ENSMUST00000021120 Igkv3-4A0A140T8Q4 119 aa12.9□□□□□ -0.34
Trim47-201ENSMUST00000021120 Atox1O08997 68 aaKnown RBP12.9□□□□□ -0.34
Trim47-201ENSMUST00000021120 Dnah7cA0A087WR13 4024 aa12.9□□□□□ -0.35
Trim47-201ENSMUST00000021120 Igkv8-19A0A0G2JFN8 121 aa12.89□□□□□ -0.35
Trim47-201ENSMUST00000021120 Coa5Q99M07 74 aa12.89□□□□□ -0.35
Trim47-201ENSMUST00000021120 Dnah11E9Q7N9 4488 aa12.89□□□□□ -0.35
Trim47-201ENSMUST00000021120 9230102O04RikA2ASX7 82 aa12.88□□□□□ -0.35
Trim47-201ENSMUST00000021120 Dnah9B1AR51 4484 aa12.88□□□□□ -0.35
Trim47-201ENSMUST00000021120 Gm10643Q3URG9 111 aa12.87□□□□□ -0.35
Trim47-201ENSMUST00000021120 Gm11627A6PWP4 55 aa12.86□□□□□ -0.35
Trim47-201ENSMUST00000021120 1700042G07RikB1AUF7 90 aa12.86□□□□□ -0.35
Trim47-201ENSMUST00000021120 Gm44790A0A0N4SV91 103 aa12.85□□□□□ -0.35
Trim47-201ENSMUST00000021120 Fam104aA2A6P4 185 aa12.84□□□□□ -0.35
Trim47-201ENSMUST00000021120 Gm12353A2AGJ4 60 aa12.82□□□□□ -0.36
Trim47-201ENSMUST00000021120 Wfdc6bF6ULY1 148 aa12.82□□□□□ -0.36
Trim47-201ENSMUST00000021120 1700012A03RikQ9DAF1 130 aa12.82□□□□□ -0.36
Trim47-201ENSMUST00000021120 Vpreb3D3Z6J4 130 aa12.82□□□□□ -0.36
Trim47-201ENSMUST00000021120 Prol1E9PYQ4 312 aa12.81□□□□□ -0.36
Trim47-201ENSMUST00000021120 Krtap10-4Q08EG8 221 aa12.8□□□□□ -0.36
Trim47-201ENSMUST00000021120 Phxr4P15974 95 aa12.8□□□□□ -0.36
Trim47-201ENSMUST00000021120 Ube2bP63147 152 aa12.8□□□□□ -0.36
Trim47-201ENSMUST00000021120 SycnQ8VCK7 134 aa12.79□□□□□ -0.36
Trim47-201ENSMUST00000021120 Fam168bQ80XQ8 194 aa12.78□□□□□ -0.36
Trim47-201ENSMUST00000021120 Gm26620Q9CY65 116 aa12.78□□□□□ -0.36
Trim47-201ENSMUST00000021120 Gm17521F6QAC8 156 aa12.77□□□□□ -0.37
Trim47-201ENSMUST00000021120 Obox2E9PXV9 151 aa12.75□□□□□ -0.37
Trim47-201ENSMUST00000021120 Defb12Q8K4N3 78 aa12.74□□□□□ -0.37
Trim47-201ENSMUST00000021120 Ube2aQ9Z255 152 aa12.71□□□□□ -0.37
Trim47-201ENSMUST00000021120 1700018G05RikA0A1B0GSI2 66 aa12.68□□□□□ -0.38
Trim47-201ENSMUST00000021120 Vps13dB1ART2 4390 aa12.68□□□□□ -0.38
Trim47-201ENSMUST00000021120 Gm21886J3QJU9 214 aa12.68□□□□□ -0.38
Trim47-201ENSMUST00000021120 Wfdc3Q14AE4 130 aa12.66□□□□□ -0.38
Trim47-201ENSMUST00000021120 Gm10065F6TJM2 114 aa12.66□□□□□ -0.38
Trim47-201ENSMUST00000021120 Zcchc13Q9D548 170 aa12.66□□□□□ -0.38
Trim47-201ENSMUST00000021120 Krtap10-10A0A1W2P7T6 217 aa12.61□□□□□ -0.39
Trim47-201ENSMUST00000021120 A0A286YE49 62 aa12.6□□□□□ -0.39
Trim47-201ENSMUST00000021120 Odf3bQ5M8M2 238 aa12.59□□□□□ -0.39
Trim47-201ENSMUST00000021120 Krtap29-1A2A5X4 342 aa12.58□□□□□ -0.4
Trim47-201ENSMUST00000021120 Phf5aP83870 110 aaKnown RBP12.58□□□□□ -0.4
Trim47-201ENSMUST00000021120 Reg3aO09037 175 aa12.57□□□□□ -0.4
Trim47-201ENSMUST00000021120 Igkv3-3A0A140T8Q0 119 aa12.56□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms