RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 7530416G11RikJ3QJX6 159 aa5.25□□□□□ -1.57
Lig3-201ENSMUST00000021039 Smr3aQ61900 147 aa5.25□□□□□ -1.57
Lig3-201ENSMUST00000021039 Elof1P60003 83 aa5.25□□□□□ -1.57
Lig3-201ENSMUST00000021039 Gm44790A0A0N4SV91 103 aa5.24□□□□□ -1.57
Lig3-201ENSMUST00000021039 A530084C06RikQ3UTW2 186 aa5.24□□□□□ -1.57
Lig3-201ENSMUST00000021039 NipblQ6KCD5 2798 aaKnown RBP5.23□□□□□ -1.57
Lig3-201ENSMUST00000021039 CnbpP53996 178 aaKnown RBP5.23□□□□□ -1.57
Lig3-201ENSMUST00000021039 9530053A07RikE9PVG8 2581 aa5.23□□□□□ -1.57
Lig3-201ENSMUST00000021039 Prrc2cQ3TLH4 2846 aaKnown RBP5.23□□□□□ -1.57
Lig3-201ENSMUST00000021039 Ubr5Q80TP3 2792 aa5.23□□□□□ -1.57
Lig3-201ENSMUST00000021039 Plac8Q9JI48 112 aa5.22□□□□□ -1.57
Lig3-201ENSMUST00000021039 Utp20Q5XG71 2788 aaKnown RBP5.21□□□□□ -1.58
Lig3-201ENSMUST00000021039 Brca2P97929 3329 aa5.2□□□□□ -1.58
Lig3-201ENSMUST00000021039 Fam168bQ80XQ8 194 aa5.2□□□□□ -1.58
Lig3-201ENSMUST00000021039 Gm11213A0A1B0GR83 88 aa5.19□□□□□ -1.58
Lig3-201ENSMUST00000021039 Rps28P62858 69 aaKnown RBP5.18□□□□□ -1.58
Lig3-201ENSMUST00000021039 Cdc42se1Q8BHL7 80 aa5.18□□□□□ -1.58
Lig3-201ENSMUST00000021039 Gm10770F7D043 238 aa5.17□□□□□ -1.58
Lig3-201ENSMUST00000021039 Notch1Q01705 2531 aa5.17□□□□□ -1.58
Lig3-201ENSMUST00000021039 Krtap16-1A2A5X5 502 aa5.17□□□□□ -1.58
Lig3-201ENSMUST00000021039 Fam229aB2KGE5 128 aa5.17□□□□□ -1.58
Lig3-201ENSMUST00000021039 Fn1P11276 2477 aaKnown RBP5.17□□□□□ -1.58
Lig3-201ENSMUST00000021039 Gm5617Q91VN2 117 aa5.17□□□□□ -1.58
Lig3-201ENSMUST00000021039 Tenm4Q3UHK6 2771 aa5.16□□□□□ -1.58
Lig3-201ENSMUST00000021039 DmdP11531 3678 aa5.16□□□□□ -1.58
Lig3-201ENSMUST00000021039 Coa5Q99M07 74 aa5.16□□□□□ -1.58
Lig3-201ENSMUST00000021039 Celsr1O35161 3034 aa5.16□□□□□ -1.58
Lig3-201ENSMUST00000021039 AY074887Q8R5F9 132 aa5.15□□□□□ -1.58
Lig3-201ENSMUST00000021039 Itpr2Q9Z329 2701 aa5.15□□□□□ -1.58
Lig3-201ENSMUST00000021039 VcanQ62059 3357 aa5.15□□□□□ -1.58
Lig3-201ENSMUST00000021039 Defb9Q8R2I6 67 aa5.15□□□□□ -1.59
Lig3-201ENSMUST00000021039 C530025M09RikF6RGA8 229 aa5.15□□□□□ -1.59
Lig3-201ENSMUST00000021039 Adgrg4B7ZCC9 3073 aa5.14□□□□□ -1.59
Lig3-201ENSMUST00000021039 Q8BT88 171 aa5.14□□□□□ -1.59
Lig3-201ENSMUST00000021039 DspE9Q557 2883 aaKnown RBP5.14□□□□□ -1.59
Lig3-201ENSMUST00000021039 Zcchc13Q9D548 170 aa5.13□□□□□ -1.59
Lig3-201ENSMUST00000021039 Chtf8P0CG14 533 aa5.13□□□□□ -1.59
Lig3-201ENSMUST00000021039 Chd6A3KFM7 2711 aa5.13□□□□□ -1.59
Lig3-201ENSMUST00000021039 Gm10308Q9CVR5 141 aa5.13□□□□□ -1.59
Lig3-201ENSMUST00000021039 Gm10065F6TJM2 114 aa5.12□□□□□ -1.59
Lig3-201ENSMUST00000021039 CriptO70333 101 aa5.12□□□□□ -1.59
Lig3-201ENSMUST00000021039 A330070K13RikQ8CA53 115 aa5.12□□□□□ -1.59
Lig3-201ENSMUST00000021039 Celsr3Q91ZI0 3301 aa5.11□□□□□ -1.59
Lig3-201ENSMUST00000021039 Igfn1Q3KNY0 2849 aa5.11□□□□□ -1.59
Lig3-201ENSMUST00000021039 Trank1Q8BV79 2999 aa5.1□□□□□ -1.59
Lig3-201ENSMUST00000021039 Hivep1Q03172 2688 aa5.09□□□□□ -1.59
Lig3-201ENSMUST00000021039 Uqcr11Q9CPX8 56 aa5.09□□□□□ -1.59
Lig3-201ENSMUST00000021039 Col6a5A6H584 2640 aa5.09□□□□□ -1.59
Lig3-201ENSMUST00000021039 Fam104aA2A6P4 185 aa5.09□□□□□ -1.6
Lig3-201ENSMUST00000021039 Gm10320E9PW43 113 aa5.09□□□□□ -1.6
Lig3-201ENSMUST00000021039 Gm7276Q3TYW4 209 aa5.09□□□□□ -1.6
Lig3-201ENSMUST00000021039 FlncQ8VHX6 2726 aaKnown RBP5.08□□□□□ -1.6
Lig3-201ENSMUST00000021039 Gm9508A0A1W2P7W0 230 aa5.07□□□□□ -1.6
Lig3-201ENSMUST00000021039 Gm26620Q9CY65 116 aa5.07□□□□□ -1.6
Lig3-201ENSMUST00000021039 NbdyA0A0N4SUI7 68 aa5.06□□□□□ -1.6
Lig3-201ENSMUST00000021039 Phxr4P15974 95 aa5.06□□□□□ -1.6
Lig3-201ENSMUST00000021039 Camk2n1Q6QWF9 78 aa5.06□□□□□ -1.6
Lig3-201ENSMUST00000021039 Dchs2A0A0A6YW72 3346 aa5.06□□□□□ -1.6
Lig3-201ENSMUST00000021039 Vps13cQ8BX70 3748 aa5.06□□□□□ -1.6
Lig3-201ENSMUST00000021039 Sec61bQ9CQS8 96 aaKnown RBP5.06□□□□□ -1.6
Lig3-201ENSMUST00000021039 SpegQ62407 3262 aa5.04□□□□□ -1.6
Lig3-201ENSMUST00000021039 Nbeal2Q6ZQA0 2742 aa5.04□□□□□ -1.6
Lig3-201ENSMUST00000021039 Gm10643Q3URG9 111 aa5.03□□□□□ -1.6
Lig3-201ENSMUST00000021039 Prr13Q9CQJ5 137 aa5.02□□□□□ -1.61
Lig3-201ENSMUST00000021039 Sprr1aQ62266 144 aa5.02□□□□□ -1.61
Lig3-201ENSMUST00000021039 Eif4ebp3Q80VV3 101 aa5.02□□□□□ -1.61
Lig3-201ENSMUST00000021039 Cypt15B1AXS0 87 aa5.01□□□□□ -1.61
Lig3-201ENSMUST00000021039 Gm9507D3Z5T3 223 aa5.01□□□□□ -1.61
Lig3-201ENSMUST00000021039 Zzef1Q5SSH7 2924 aa5.01□□□□□ -1.61
Lig3-201ENSMUST00000021039 Myo15aQ9QZZ4 3511 aa5□□□□□ -1.61
Lig3-201ENSMUST00000021039 RelnQ60841 3461 aa5□□□□□ -1.61
Lig3-201ENSMUST00000021039 2310050C09RikG5E8Z3 280 aa5□□□□□ -1.61
Lig3-201ENSMUST00000021039 Anapc11Q9CPX9 84 aa4.97□□□□□ -1.61
Lig3-201ENSMUST00000021039 2310061N02RikQ9D6S9 174 aa4.97□□□□□ -1.61
Lig3-201ENSMUST00000021039 Dchs1E9PVD3 3291 aa4.96□□□□□ -1.61
Lig3-201ENSMUST00000021039 Gm21798J3QNU5 87 aa4.96□□□□□ -1.62
Lig3-201ENSMUST00000021039 Tenm3Q9WTS6 2715 aa4.96□□□□□ -1.62
Lig3-201ENSMUST00000021039 Gm9955Q8CEJ8 102 aa4.96□□□□□ -1.62
Lig3-201ENSMUST00000021039 Cypt14J3QPF7 87 aa4.95□□□□□ -1.62
Lig3-201ENSMUST00000021039 Celsr2Q9R0M0 2920 aa4.95□□□□□ -1.62
Lig3-201ENSMUST00000021039 Smim29Q8R043 75 aa4.95□□□□□ -1.62
Lig3-201ENSMUST00000021039 Zfhx4Q9JJN2 3550 aa4.95□□□□□ -1.62
Lig3-201ENSMUST00000021039 Gm3880A0A1B0GSB3 72 aa4.94□□□□□ -1.62
Lig3-201ENSMUST00000021039 Krtap29-1A2A5X4 342 aa4.94□□□□□ -1.62
Lig3-201ENSMUST00000021039 Pkd1l1Q8R526 2615 aa4.94□□□□□ -1.62
Lig3-201ENSMUST00000021039 6030445D17RikE9Q8F9 148 aa4.92□□□□□ -1.62
Lig3-201ENSMUST00000021039 2310034C09RikQ9D746 214 aa4.92□□□□□ -1.62
Lig3-201ENSMUST00000021039 Stab2Q8R4U0 2559 aa4.92□□□□□ -1.62
Lig3-201ENSMUST00000021039 Akap9Q70FJ1 3797 aa4.9□□□□□ -1.62
Lig3-201ENSMUST00000021039 LrbaQ9ESE1 2856 aa4.9□□□□□ -1.62
Lig3-201ENSMUST00000021039 FcgbpE9Q0B5 2583 aa4.9□□□□□ -1.62
Lig3-201ENSMUST00000021039 Krtap15-1Q9QZU5 150 aa4.9□□□□□ -1.63
Lig3-201ENSMUST00000021039 Gm10139O88245 57 aa4.88□□□□□ -1.63
Lig3-201ENSMUST00000021039 Odf3bQ5M8M2 238 aa4.88□□□□□ -1.63
Lig3-201ENSMUST00000021039 Krtap13O88375 197 aa4.88□□□□□ -1.63
Lig3-201ENSMUST00000021039 Gm19426M0QWC7 77 aa4.88□□□□□ -1.63
Lig3-201ENSMUST00000021039 Gm4491E0CX42 125 aa4.86□□□□□ -1.63
Lig3-201ENSMUST00000021039 Krtap10-4Q08EG8 221 aa4.85□□□□□ -1.63
Lig3-201ENSMUST00000021039 Tex15F8VPN2 2785 aa4.83□□□□□ -1.64
Lig3-201ENSMUST00000021039 Chd9Q8BYH8 2885 aa4.83□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 130.9 ms