RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 UqcrqQ9CQ69 82 aa10.64□□□□□ -0.71
Trim28-201ENSMUST00000005705 Ighv8-13A0A075B5Y0 101 aa10.64□□□□□ -0.71
Trim28-201ENSMUST00000005705 Tcl1b5P56845 121 aa10.63□□□□□ -0.71
Trim28-201ENSMUST00000005705 Psors1c2Q80ZC9 134 aa10.62□□□□□ -0.71
Trim28-201ENSMUST00000005705 Dnah7bL7N1Y0 4068 aa10.61□□□□□ -0.71
Trim28-201ENSMUST00000005705 C130032M10RikQ8C888 123 aa10.61□□□□□ -0.71
Trim28-201ENSMUST00000005705 Ighv2-2A0A075B5P8 116 aa10.58□□□□□ -0.72
Trim28-201ENSMUST00000005705 P01821 116 aa10.58□□□□□ -0.72
Trim28-201ENSMUST00000005705 Ube2bP63147 152 aa10.57□□□□□ -0.72
Trim28-201ENSMUST00000005705 Q8BT88 171 aa10.57□□□□□ -0.72
Trim28-201ENSMUST00000005705 Sprr2jO70561 109 aa10.57□□□□□ -0.72
Trim28-201ENSMUST00000005705 Sprr4Q8CGN8 76 aa10.56□□□□□ -0.72
Trim28-201ENSMUST00000005705 AplnQ9R0R4 77 aa10.56□□□□□ -0.72
Trim28-201ENSMUST00000005705 Gm44790A0A0N4SV91 103 aa10.56□□□□□ -0.72
Trim28-201ENSMUST00000005705 Phxr5P08399 672 aa10.56□□□□□ -0.72
Trim28-201ENSMUST00000005705 Gm17521F6QAC8 156 aa10.55□□□□□ -0.72
Trim28-201ENSMUST00000005705 Cox6a2P43023 97 aa10.54□□□□□ -0.72
Trim28-201ENSMUST00000005705 A930002H24RikQ8C8Y3 163 aa10.53□□□□□ -0.72
Trim28-201ENSMUST00000005705 Mrpl34Q99N91 92 aa10.52□□□□□ -0.73
Trim28-201ENSMUST00000005705 Ccdc179J3QM76 67 aa10.51□□□□□ -0.73
Trim28-201ENSMUST00000005705 PscaP57096 123 aa10.51□□□□□ -0.73
Trim28-201ENSMUST00000005705 Igkv3-10A0A0G2JGN0 119 aa10.5□□□□□ -0.73
Trim28-201ENSMUST00000005705 1700018G05RikA0A1B0GSI2 66 aa10.48□□□□□ -0.73
Trim28-201ENSMUST00000005705 AI606181Q8C7B9 129 aa10.48□□□□□ -0.73
Trim28-201ENSMUST00000005705 Dnah14A0A140LIJ4 4489 aa10.47□□□□□ -0.73
Trim28-201ENSMUST00000005705 Igkv3-12A0A140T8P0 119 aa10.47□□□□□ -0.73
Trim28-201ENSMUST00000005705 Igkv8-19A0A0G2JFN8 121 aa10.46□□□□□ -0.74
Trim28-201ENSMUST00000005705 Atox1O08997 68 aaKnown RBP10.46□□□□□ -0.74
Trim28-201ENSMUST00000005705 Defb38Q7TNV7 63 aa10.46□□□□□ -0.74
Trim28-201ENSMUST00000005705 Obox2E9PXV9 151 aa10.45□□□□□ -0.74
Trim28-201ENSMUST00000005705 Coa6Q8BGD8 79 aa10.43□□□□□ -0.74
Trim28-201ENSMUST00000005705 Cdc42se1Q8BHL7 80 aa10.42□□□□□ -0.74
Trim28-201ENSMUST00000005705 Vpreb3D3Z6J4 130 aa10.42□□□□□ -0.74
Trim28-201ENSMUST00000005705 Gm7276Q3TYW4 209 aa10.41□□□□□ -0.74
Trim28-201ENSMUST00000005705 Wfdc17Q5SSJ1 76 aa10.41□□□□□ -0.74
Trim28-201ENSMUST00000005705 P84750 121 aa10.41□□□□□ -0.74
Trim28-201ENSMUST00000005705 Reg3aO09037 175 aa10.41□□□□□ -0.74
Trim28-201ENSMUST00000005705 Igkv3-4A0A140T8Q4 119 aa10.39□□□□□ -0.75
Trim28-201ENSMUST00000005705 Rpl37aP61514 92 aa10.39□□□□□ -0.75
Trim28-201ENSMUST00000005705 FcgbpE9Q0B5 2583 aa10.39□□□□□ -0.75
Trim28-201ENSMUST00000005705 Gm21886J3QJU9 214 aa10.37□□□□□ -0.75
Trim28-201ENSMUST00000005705 Dmac1Q9CQ00 111 aa10.37□□□□□ -0.75
Trim28-201ENSMUST00000005705 Gm16181B0V2H2 73 aa10.37□□□□□ -0.75
Trim28-201ENSMUST00000005705 Kmt2aP55200 3966 aa10.35□□□□□ -0.75
Trim28-201ENSMUST00000005705 1700074P13RikQ9D9G7 251 aa10.32□□□□□ -0.76
Trim28-201ENSMUST00000005705 Coa5Q99M07 74 aa10.32□□□□□ -0.76
Trim28-201ENSMUST00000005705 Igkv3-7A0A0G2JE31 119 aa10.31□□□□□ -0.76
Trim28-201ENSMUST00000005705 Gm9507D3Z5T3 223 aa10.31□□□□□ -0.76
Trim28-201ENSMUST00000005705 Wfdc6bF6ULY1 148 aa10.31□□□□□ -0.76
Trim28-201ENSMUST00000005705 Phf5aP83870 110 aaKnown RBP10.31□□□□□ -0.76
Trim28-201ENSMUST00000005705 Plac8Q9JI48 112 aa10.29□□□□□ -0.76
Trim28-201ENSMUST00000005705 SycnQ8VCK7 134 aa10.28□□□□□ -0.76
Trim28-201ENSMUST00000005705 Gm10267M0QWD8 85 aa10.28□□□□□ -0.76
Trim28-201ENSMUST00000005705 A0A286YE49 62 aa10.26□□□□□ -0.77
Trim28-201ENSMUST00000005705 Sox16Q62247 57 aa10.26□□□□□ -0.77
Trim28-201ENSMUST00000005705 Gm10837Q3UTT8 145 aa10.26□□□□□ -0.77
Trim28-201ENSMUST00000005705 Gm11627A6PWP4 55 aa10.25□□□□□ -0.77
Trim28-201ENSMUST00000005705 4933415A04RikQ9D443 101 aa10.25□□□□□ -0.77
Trim28-201ENSMUST00000005705 Fam104aA2A6P4 185 aa10.25□□□□□ -0.77
Trim28-201ENSMUST00000005705 Gm28230A0A0A0MQ91 144 aa10.24□□□□□ -0.77
Trim28-201ENSMUST00000005705 Defb10Q8R2I8 73 aa10.24□□□□□ -0.77
Trim28-201ENSMUST00000005705 Anapc11Q9CPX9 84 aa10.23□□□□□ -0.77
Trim28-201ENSMUST00000005705 SptssbQ925E8 76 aa10.22□□□□□ -0.77
Trim28-201ENSMUST00000005705 B9d2Q3UK10 175 aa10.22□□□□□ -0.77
Trim28-201ENSMUST00000005705 Dnah3Q8BW94 4083 aa10.21□□□□□ -0.78
Trim28-201ENSMUST00000005705 Sprr1aQ62266 144 aa10.2□□□□□ -0.78
Trim28-201ENSMUST00000005705 Zcchc13Q9D548 170 aa10.2□□□□□ -0.78
Trim28-201ENSMUST00000005705 Ube2aQ9Z255 152 aa10.2□□□□□ -0.78
Trim28-201ENSMUST00000005705 Gm12353A2AGJ4 60 aa10.19□□□□□ -0.78
Trim28-201ENSMUST00000005705 Krtap10-4Q08EG8 221 aa10.18□□□□□ -0.78
Trim28-201ENSMUST00000005705 Igkv3-3A0A140T8Q0 119 aa10.18□□□□□ -0.78
Trim28-201ENSMUST00000005705 Nupr2Q497P3 102 aa10.18□□□□□ -0.78
Trim28-201ENSMUST00000005705 1700012A03RikQ9DAF1 130 aa10.18□□□□□ -0.78
Trim28-201ENSMUST00000005705 Prol1E9PYQ4 312 aa10.17□□□□□ -0.78
Trim28-201ENSMUST00000005705 Gm10642Q3TWM1 71 aa10.16□□□□□ -0.78
Trim28-201ENSMUST00000005705 Dnah6E9Q0B6 4144 aa10.15□□□□□ -0.78
Trim28-201ENSMUST00000005705 Odf3bQ5M8M2 238 aa10.14□□□□□ -0.79
Trim28-201ENSMUST00000005705 Phxr4P15974 95 aa10.13□□□□□ -0.79
Trim28-201ENSMUST00000005705 U90926O08546 118 aa10.12□□□□□ -0.79
Trim28-201ENSMUST00000005705 Chtf8P0CG14 533 aa10.12□□□□□ -0.79
Trim28-201ENSMUST00000005705 1700042G07RikB1AUF7 90 aa10.11□□□□□ -0.79
Trim28-201ENSMUST00000005705 Gm17349F7BGH6 99 aa10.11□□□□□ -0.79
Trim28-201ENSMUST00000005705 1600014C23RikQ9DAX4 101 aa10.11□□□□□ -0.79
Trim28-201ENSMUST00000005705 Gm20604F8WIA3 75 aa10.09□□□□□ -0.79
Trim28-201ENSMUST00000005705 Igkv3-5A0A140T8M6 119 aa10.09□□□□□ -0.79
Trim28-201ENSMUST00000005705 Defb9Q8R2I6 67 aa10.09□□□□□ -0.79
Trim28-201ENSMUST00000005705 Gm37013Q8K491 104 aa10.08□□□□□ -0.8
Trim28-201ENSMUST00000005705 OxtP35454 125 aa10.07□□□□□ -0.8
Trim28-201ENSMUST00000005705 Spata3Q9D9T6 193 aa10.07□□□□□ -0.8
Trim28-201ENSMUST00000005705 Wfdc3Q14AE4 130 aa10.06□□□□□ -0.8
Trim28-201ENSMUST00000005705 Fras1Q80T14 4010 aa10.06□□□□□ -0.8
Trim28-201ENSMUST00000005705 Gm26620Q9CY65 116 aa10.05□□□□□ -0.8
Trim28-201ENSMUST00000005705 2310061N02RikQ9D6S9 174 aa10.05□□□□□ -0.8
Trim28-201ENSMUST00000005705 Wfdc10Q3V2J9 124 aa10.05□□□□□ -0.8
Trim28-201ENSMUST00000005705 Ndufs5Q99LY9 106 aa10.05□□□□□ -0.8
Trim28-201ENSMUST00000005705 Dnah11E9Q7N9 4488 aa10.03□□□□□ -0.8
Trim28-201ENSMUST00000005705 Gm10160F6Y577 67 aa10.01□□□□□ -0.81
Trim28-201ENSMUST00000005705 Dnah5Q8VHE6 4621 aa10.01□□□□□ -0.81
Trim28-201ENSMUST00000005705 Adm2Q7TNK8 150 aa10□□□□□ -0.81
Trim28-201ENSMUST00000005705 Chchd10Q7TNL9 138 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 77.2 ms