RNA–Protein interactions for RNA: ENSMUST00000209085.1

Smarca2-246, Transcript of Probable global transcription activator SNF2L2, mousemouse

TSL 5 BASIC

Gene Smarca2, Length 1,841 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2-246ENSMUST00000209085 TprF6ZDS4 2431 aaKnown RBP4.51□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Cnot1Q6ZQ08 2375 aaKnown RBP4.51□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Wfdc11A2A5H7 82 aa4.51□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Vpreb3D3Z6J4 130 aa4.51□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Tnp2P11378 117 aa4.51□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Gm7276Q3TYW4 209 aa4.51□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Camk2n2Q78WH7 79 aa4.51□□□□□ -1.69
Smarca2-246ENSMUST00000209085 AY074887Q8R5F9 132 aa4.51□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Lce1lQ9D1G7 135 aa4.51□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Zfhx3Q61329 3726 aa4.5□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Ncor1Q60974 2453 aa4.5□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Spink4O35679 86 aa4.5□□□□□ -1.69
Smarca2-246ENSMUST00000209085 KalrnA2CG49 2964 aa4.5□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Zfhx4Q9JJN2 3550 aa4.49□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Dchs1E9PVD3 3291 aa4.49□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Igkv8-16A0A0G2JDG9 121 aa4.49□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Ndufb1P0DN34 57 aa4.49□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Defb42Q8BVB5 75 aa4.49□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Q8K1L6 76 aa4.49□□□□□ -1.69
Smarca2-246ENSMUST00000209085 2310057N15RikQ9D6T8 200 aa4.49□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Zzef1Q5SSH7 2924 aa4.49□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Map1bP14873 2464 aaKnown RBP4.49□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Igkv3-2A0A075B5P0 119 aa4.49□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Ighv8-13A0A075B5Y0 101 aa4.49□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Ndufs5Q99LY9 106 aa4.49□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Tomm7Q9D173 55 aa4.49□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Akap6E9Q9K8 2307 aa4.48□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Gm44790A0A0N4SV91 103 aa4.48□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Wfdc3Q14AE4 130 aa4.48□□□□□ -1.69
Smarca2-246ENSMUST00000209085 C130032M10RikQ8C888 123 aa4.48□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Defb12Q8K4N3 78 aa4.48□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Qrich2A0A140LIY9 2337 aa4.47□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Gm3285A0A1W2P7U0 201 aa4.47□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Mrpl34Q99N91 92 aa4.47□□□□□ -1.69
Smarca2-246ENSMUST00000209085 2010109I03RikQ9CQ11 111 aa4.47□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Nop10Q9CQS2 64 aa4.47□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Lypd5Q9D7Z7 256 aa4.47□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Celsr3Q91ZI0 3301 aa4.47□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Csmd1Q923L3 3564 aa4.46□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Prrc2cQ3TLH4 2846 aaKnown RBP4.46□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Med13lQ6JPI3 2207 aa4.46□□□□□ -1.69
Smarca2-246ENSMUST00000209085 Igkv3-4A0A140T8Q4 119 aa4.46□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Gm3443F7CCV5 94 aa4.46□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Cox6a2P43023 97 aa4.46□□□□□ -1.7
Smarca2-246ENSMUST00000209085 SptssbQ925E8 76 aa4.46□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Igkv3-7A0A0G2JE31 119 aa4.45□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Igkv4-61A0A0G2JH00 117 aa4.44□□□□□ -1.7
Smarca2-246ENSMUST00000209085 A0A286YE49 62 aa4.44□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Ptprz1B9EKR1 2312 aa4.44□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Wfdc12Q9JHY3 85 aa4.44□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Col6a6Q8C6K9 2265 aa4.44□□□□□ -1.7
Smarca2-246ENSMUST00000209085 SetxA2AKX3 2646 aa4.43□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Igkv4-54A0A0G2JES9 117 aa4.43□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Cox7b2Q9D2H1 82 aa4.43□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Vps13cQ8BX70 3748 aa4.43□□□□□ -1.7
Smarca2-246ENSMUST00000209085 SpenQ62504 3644 aaKnown RBP4.42□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Igkv3-9A0A140T8P4 119 aa4.42□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Defb37Q7TMD2 62 aa4.42□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Plac8Q9JI48 112 aa4.42□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Sorl1O88307 2215 aaKnown RBP4.42□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Igkv3-1A0A075B5P1 119 aa4.42□□□□□ -1.7
Smarca2-246ENSMUST00000209085 AcacaQ5SWU9 2345 aa4.41□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Krtap3-1A2A591 98 aa4.41□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Muc5acE9QAQ8 3455 aa4.41□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Abca4O35600 2310 aa4.41□□□□□ -1.7
Smarca2-246ENSMUST00000209085 Spta1P08032 2415 aa4.4□□□□□ -1.71
Smarca2-246ENSMUST00000209085 PrlhG3UWC3 86 aa4.39□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Fbn2Q61555 2907 aa4.39□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Limd2Q8BGB5 128 aa4.39□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Igkv1-122A0A140T8M9 119 aa4.39□□□□□ -1.71
Smarca2-246ENSMUST00000209085 RelnQ60841 3461 aa4.38□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Gm20661K7N787 53 aa4.38□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Kmt2bO08550 2713 aa4.38□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Gm8439G3UWA7 96 aa4.37□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Dmxl2Q8BPN8 3032 aa4.37□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Zfp292Q9Z2U2 2698 aa4.37□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Notch3Q61982 2318 aa4.37□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Prpf8Q99PV0 2335 aaKnown RBP4.36□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Gm18596A0A1W2P860 280 aa4.36□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Spg11Q3UHA3 2430 aa4.36□□□□□ -1.71
Smarca2-246ENSMUST00000209085 DspE9Q557 2883 aaKnown RBP4.36□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Prol1E9PYQ4 312 aa4.35□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Zcchc13Q9D548 170 aa4.35□□□□□ -1.71
Smarca2-246ENSMUST00000209085 CrebbpP45481 2441 aa4.35□□□□□ -1.71
Smarca2-246ENSMUST00000209085 PrcdQ00LT2 53 aa4.35□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Uqcr11Q9CPX8 56 aa4.35□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Gvin1Q80SU7 2427 aa4.34□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Gm21886J3QJU9 214 aa4.34□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Defb40Q70KL2 73 aa4.34□□□□□ -1.71
Smarca2-246ENSMUST00000209085 Armcx4E9PWM3 2356 aa4.33□□□□□ -1.72
Smarca2-246ENSMUST00000209085 Prh1P05142 261 aa4.33□□□□□ -1.72
Smarca2-246ENSMUST00000209085 PscaP57096 123 aa4.33□□□□□ -1.72
Smarca2-246ENSMUST00000209085 Q8BGJ3 129 aa4.32□□□□□ -1.72
Smarca2-246ENSMUST00000209085 Trank1Q8BV79 2999 aa4.32□□□□□ -1.72
Smarca2-246ENSMUST00000209085 Ankhd1E9PUR0 2548 aaKnown RBP4.32□□□□□ -1.72
Smarca2-246ENSMUST00000209085 A0A286YCN5 57 aa4.32□□□□□ -1.72
Smarca2-246ENSMUST00000209085 Gm7257D3YX25 99 aa4.32□□□□□ -1.72
Smarca2-246ENSMUST00000209085 Gm2310J3QNJ2 377 aa4.32□□□□□ -1.72
Smarca2-246ENSMUST00000209085 Wfdc13Q5DQQ6 81 aa4.32□□□□□ -1.72
Smarca2-246ENSMUST00000209085 Tln1P26039 2541 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 70 ms