RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 9530003J23RikQ8BM26 151 aa7.67□□□□□ -1.18
Vps54-202ENSMUST00000109578 Srrm2Q8BTI8 2703 aaKnown RBP7.67□□□□□ -1.18
Vps54-202ENSMUST00000109578 Col6a5A6H584 2640 aa7.67□□□□□ -1.18
Vps54-202ENSMUST00000109578 Gm17689B3GLJ4 109 aa7.66□□□□□ -1.18
Vps54-202ENSMUST00000109578 Tcl1b5P56845 121 aa7.66□□□□□ -1.18
Vps54-202ENSMUST00000109578 FlnbQ80X90 2602 aaKnown RBP7.65□□□□□ -1.18
Vps54-202ENSMUST00000109578 Gm17577J3QNF7 156 aa7.65□□□□□ -1.18
Vps54-202ENSMUST00000109578 Reg3bP35230 175 aa7.65□□□□□ -1.18
Vps54-202ENSMUST00000109578 A730071L15RikQ8C4X0 137 aa7.65□□□□□ -1.18
Vps54-202ENSMUST00000109578 Cd164Q9R0L9 197 aa7.65□□□□□ -1.19
Vps54-202ENSMUST00000109578 Smim29Q8R043 75 aa7.64□□□□□ -1.19
Vps54-202ENSMUST00000109578 Gm17509Q9CZ61 145 aa7.64□□□□□ -1.19
Vps54-202ENSMUST00000109578 Igkv8-34A0A0G2JDU0 121 aa7.64□□□□□ -1.19
Vps54-202ENSMUST00000109578 Cox7b2Q9D2H1 82 aa7.63□□□□□ -1.19
Vps54-202ENSMUST00000109578 Inafm2A0A1L1STD6 152 aa7.63□□□□□ -1.19
Vps54-202ENSMUST00000109578 Fam19a3Q7TPG6 132 aa7.63□□□□□ -1.19
Vps54-202ENSMUST00000109578 B230307C23RikQ8BLB2 64 aa7.63□□□□□ -1.19
Vps54-202ENSMUST00000109578 Rbm3O89086 153 aaKnown RBP7.62□□□□□ -1.19
Vps54-202ENSMUST00000109578 9430015G10RikA2ASP7 199 aa7.62□□□□□ -1.19
Vps54-202ENSMUST00000109578 VwfQ8CIZ8 2813 aa7.61□□□□□ -1.19
Vps54-202ENSMUST00000109578 Igkv1-110A0A0B4J1I0 119 aa7.61□□□□□ -1.19
Vps54-202ENSMUST00000109578 Igkv4-92A0A0B4J1I2 117 aa7.61□□□□□ -1.19
Vps54-202ENSMUST00000109578 Igkv1-122A0A140T8M9 119 aa7.61□□□□□ -1.19
Vps54-202ENSMUST00000109578 Camk2n2Q78WH7 79 aa7.61□□□□□ -1.19
Vps54-202ENSMUST00000109578 A830005F24RikQ8BRT5 167 aa7.59□□□□□ -1.19
Vps54-202ENSMUST00000109578 Cdk2ap2Q9CPY4 127 aa7.59□□□□□ -1.19
Vps54-202ENSMUST00000109578 Kmt2aP55200 3966 aa7.59□□□□□ -1.19
Vps54-202ENSMUST00000109578 Igkv8-28A0A0G2JE47 121 aa7.59□□□□□ -1.19
Vps54-202ENSMUST00000109578 Elof1P60003 83 aa7.59□□□□□ -1.19
Vps54-202ENSMUST00000109578 Ighv2-5A0A0A6YY69 116 aa7.58□□□□□ -1.2
Vps54-202ENSMUST00000109578 E130114P18RikF6S0S7 154 aa7.58□□□□□ -1.2
Vps54-202ENSMUST00000109578 Nsd1O88491 2588 aaKnown RBP7.58□□□□□ -1.2
Vps54-202ENSMUST00000109578 Sprr4Q8CGN8 76 aa7.58□□□□□ -1.2
Vps54-202ENSMUST00000109578 BikO70337 150 aa7.58□□□□□ -1.2
Vps54-202ENSMUST00000109578 GhrhP16043 103 aa7.58□□□□□ -1.2
Vps54-202ENSMUST00000109578 Tmem258P61166 79 aa7.57□□□□□ -1.2
Vps54-202ENSMUST00000109578 A0A286YE02 88 aa7.56□□□□□ -1.2
Vps54-202ENSMUST00000109578 Gm7137J3QMW1 236 aa7.56□□□□□ -1.2
Vps54-202ENSMUST00000109578 Trav14-1A0A0G2JF94 121 aa7.55□□□□□ -1.2
Vps54-202ENSMUST00000109578 Phxr5P08399 672 aa7.55□□□□□ -1.2
Vps54-202ENSMUST00000109578 BC048502Q80Y74 154 aa7.55□□□□□ -1.2
Vps54-202ENSMUST00000109578 Dnah10D3YYQ8 4591 aa7.55□□□□□ -1.2
Vps54-202ENSMUST00000109578 A330070K13RikQ8CA53 115 aa7.55□□□□□ -1.2
Vps54-202ENSMUST00000109578 Dnah7bL7N1Y0 4068 aa7.54□□□□□ -1.2
Vps54-202ENSMUST00000109578 AplnQ9R0R4 77 aa7.54□□□□□ -1.2
Vps54-202ENSMUST00000109578 Vpreb2P13373 142 aa7.53□□□□□ -1.2
Vps54-202ENSMUST00000109578 Pou2af1Q64693 256 aa7.53□□□□□ -1.2
Vps54-202ENSMUST00000109578 Gm19935A0A1B0GSF9 52 aa7.52□□□□□ -1.2
Vps54-202ENSMUST00000109578 SnurfQ9WU12 71 aa7.52□□□□□ -1.2
Vps54-202ENSMUST00000109578 Csmd3Q80T79 3707 aa7.52□□□□□ -1.21
Vps54-202ENSMUST00000109578 Igkv3-2A0A075B5P0 119 aa7.52□□□□□ -1.21
Vps54-202ENSMUST00000109578 Pde6gP09174 87 aa7.52□□□□□ -1.21
Vps54-202ENSMUST00000109578 Rps28P62858 69 aaKnown RBP7.51□□□□□ -1.21
Vps54-202ENSMUST00000109578 Gm36176A0A1W2P8D5 158 aa7.51□□□□□ -1.21
Vps54-202ENSMUST00000109578 Brk1Q91VR8 75 aa7.51□□□□□ -1.21
Vps54-202ENSMUST00000109578 Fam168bQ80XQ8 194 aa7.51□□□□□ -1.21
Vps54-202ENSMUST00000109578 Dnah3Q8BW94 4083 aa7.5□□□□□ -1.21
Vps54-202ENSMUST00000109578 Samd13D3YUG0 102 aa7.5□□□□□ -1.21
Vps54-202ENSMUST00000109578 Ighv2-2A0A075B5P8 116 aa7.49□□□□□ -1.21
Vps54-202ENSMUST00000109578 Sfta2E9PXB6 77 aa7.49□□□□□ -1.21
Vps54-202ENSMUST00000109578 P01821 116 aa7.49□□□□□ -1.21
Vps54-202ENSMUST00000109578 Gm16485Q8C4B7 115 aa7.48□□□□□ -1.21
Vps54-202ENSMUST00000109578 9530053A07RikE9PVG8 2581 aa7.48□□□□□ -1.21
Vps54-202ENSMUST00000109578 Fn1P11276 2477 aaKnown RBP7.48□□□□□ -1.21
Vps54-202ENSMUST00000109578 Gm11011D3Z3L9 86 aa7.47□□□□□ -1.21
Vps54-202ENSMUST00000109578 Gm7276Q3TYW4 209 aa7.47□□□□□ -1.21
Vps54-202ENSMUST00000109578 HrnrQ8VHD8 2496 aa7.47□□□□□ -1.21
Vps54-202ENSMUST00000109578 Ndufc1Q9CQY9 76 aa7.47□□□□□ -1.21
Vps54-202ENSMUST00000109578 Sslp1Q3UN54 99 aa7.46□□□□□ -1.21
Vps54-202ENSMUST00000109578 Prr15lQ8JZM2 100 aa7.46□□□□□ -1.22
Vps54-202ENSMUST00000109578 Defa27F2Z403 93 aa7.45□□□□□ -1.22
Vps54-202ENSMUST00000109578 Fam19a5Q91WE9 132 aa7.45□□□□□ -1.22
Vps54-202ENSMUST00000109578 Dnah14A0A140LIJ4 4489 aa7.45□□□□□ -1.22
Vps54-202ENSMUST00000109578 Sprr2jO70561 109 aa7.44□□□□□ -1.22
Vps54-202ENSMUST00000109578 P84750 121 aa7.44□□□□□ -1.22
Vps54-202ENSMUST00000109578 P06320 134 aa7.44□□□□□ -1.22
Vps54-202ENSMUST00000109578 Cox6a2P43023 97 aa7.44□□□□□ -1.22
Vps54-202ENSMUST00000109578 Defb40Q70KL2 73 aa7.44□□□□□ -1.22
Vps54-202ENSMUST00000109578 TgO08710 2766 aa7.44□□□□□ -1.22
Vps54-202ENSMUST00000109578 C130032M10RikQ8C888 123 aa7.44□□□□□ -1.22
Vps54-202ENSMUST00000109578 Gm16181B0V2H2 73 aa7.42□□□□□ -1.22
Vps54-202ENSMUST00000109578 Smlr1J3QMJ4 66 aa7.42□□□□□ -1.22
Vps54-202ENSMUST00000109578 PscaP57096 123 aa7.41□□□□□ -1.22
Vps54-202ENSMUST00000109578 Gm5617Q91VN2 117 aa7.41□□□□□ -1.22
Vps54-202ENSMUST00000109578 Dmac1Q9CQ00 111 aa7.41□□□□□ -1.22
Vps54-202ENSMUST00000109578 Gm37389A0A0A6YW05 95 aa7.4□□□□□ -1.23
Vps54-202ENSMUST00000109578 Gm44790A0A0N4SV91 103 aa7.4□□□□□ -1.23
Vps54-202ENSMUST00000109578 Vpreb1P13372 142 aa7.4□□□□□ -1.23
Vps54-202ENSMUST00000109578 Sprr1aQ62266 144 aa7.4□□□□□ -1.23
Vps54-202ENSMUST00000109578 Obox2E9PXV9 151 aa7.39□□□□□ -1.23
Vps54-202ENSMUST00000109578 Igkv3-12A0A140T8P0 119 aa7.39□□□□□ -1.23
Vps54-202ENSMUST00000109578 Spink8Q09TK9 105 aa7.39□□□□□ -1.23
Vps54-202ENSMUST00000109578 6430550D23RikE9Q1X6 194 aa7.38□□□□□ -1.23
Vps54-202ENSMUST00000109578 Wfdc6bF6ULY1 148 aa7.38□□□□□ -1.23
Vps54-202ENSMUST00000109578 Q8BT88 171 aa7.38□□□□□ -1.23
Vps54-202ENSMUST00000109578 Mrpl34Q99N91 92 aa7.38□□□□□ -1.23
Vps54-202ENSMUST00000109578 Gm11627A6PWP4 55 aa7.37□□□□□ -1.23
Vps54-202ENSMUST00000109578 Defa28D3Z1V9 94 aa7.37□□□□□ -1.23
Vps54-202ENSMUST00000109578 Vpreb3D3Z6J4 130 aa7.37□□□□□ -1.23
Vps54-202ENSMUST00000109578 Gm17521F6QAC8 156 aa7.37□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 110.2 ms