RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Sprr1bQ62267 153 aa7.03□□□□□ -1.28
Trim17-201ENSMUST00000047697 Ighv2-9A0A075B5Q5 116 aa7.02□□□□□ -1.29
Trim17-201ENSMUST00000047697 Rps28P62858 69 aaKnown RBP7.02□□□□□ -1.29
Trim17-201ENSMUST00000047697 Krtap11-1E9Q2E9 183 aa7.02□□□□□ -1.29
Trim17-201ENSMUST00000047697 Pde6gP09174 87 aa7.02□□□□□ -1.29
Trim17-201ENSMUST00000047697 Vpreb1P13372 142 aa7.02□□□□□ -1.29
Trim17-201ENSMUST00000047697 Klk9Q32M27 251 aa7.02□□□□□ -1.29
Trim17-201ENSMUST00000047697 Prr15lQ8JZM2 100 aa7.02□□□□□ -1.29
Trim17-201ENSMUST00000047697 Ndufc1Q9CQY9 76 aa7.02□□□□□ -1.29
Trim17-201ENSMUST00000047697 Gm3233E9Q2H5 230 aa7.01□□□□□ -1.29
Trim17-201ENSMUST00000047697 Defb12Q8K4N3 78 aa7.01□□□□□ -1.29
Trim17-201ENSMUST00000047697 Krtap24-1G3X9A2 248 aa7.01□□□□□ -1.29
Trim17-201ENSMUST00000047697 Cd164Q9R0L9 197 aa7□□□□□ -1.29
Trim17-201ENSMUST00000047697 9430015G10RikA2ASP7 199 aa7□□□□□ -1.29
Trim17-201ENSMUST00000047697 CrygeQ03740 174 aa7□□□□□ -1.29
Trim17-201ENSMUST00000047697 Csmd2V9GX34 3611 aa6.99□□□□□ -1.29
Trim17-201ENSMUST00000047697 Hivep1Q03172 2688 aa6.99□□□□□ -1.29
Trim17-201ENSMUST00000047697 Nbeal2Q6ZQA0 2742 aa6.99□□□□□ -1.29
Trim17-201ENSMUST00000047697 Gm11011D3Z3L9 86 aa6.99□□□□□ -1.29
Trim17-201ENSMUST00000047697 A830005F24RikQ8BRT5 167 aa6.99□□□□□ -1.29
Trim17-201ENSMUST00000047697 Stab1Q8R4Y4 2571 aa6.99□□□□□ -1.29
Trim17-201ENSMUST00000047697 Tcl1b5P56845 121 aa6.98□□□□□ -1.29
Trim17-201ENSMUST00000047697 A730009L09RikA0A1B0GS82 72 aa6.98□□□□□ -1.29
Trim17-201ENSMUST00000047697 2310034G01RikA0A286YDL3 209 aa6.98□□□□□ -1.29
Trim17-201ENSMUST00000047697 Spink8Q09TK9 105 aa6.98□□□□□ -1.29
Trim17-201ENSMUST00000047697 HrnrQ8VHD8 2496 aa6.97□□□□□ -1.29
Trim17-201ENSMUST00000047697 E130114P18RikF6S0S7 154 aa6.97□□□□□ -1.29
Trim17-201ENSMUST00000047697 Ighv2-5A0A0A6YY69 116 aa6.96□□□□□ -1.29
Trim17-201ENSMUST00000047697 CnbpP53996 178 aaKnown RBP6.96□□□□□ -1.3
Trim17-201ENSMUST00000047697 AY074887Q8R5F9 132 aa6.96□□□□□ -1.3
Trim17-201ENSMUST00000047697 P06320 134 aa6.96□□□□□ -1.3
Trim17-201ENSMUST00000047697 Igkv1-110A0A0B4J1I0 119 aa6.95□□□□□ -1.3
Trim17-201ENSMUST00000047697 Defb40Q70KL2 73 aa6.95□□□□□ -1.3
Trim17-201ENSMUST00000047697 Gm17509Q9CZ61 145 aa6.95□□□□□ -1.3
Trim17-201ENSMUST00000047697 Igsf10Q3V1M1 2594 aa6.95□□□□□ -1.3
Trim17-201ENSMUST00000047697 Gm10770F7D043 238 aa6.94□□□□□ -1.3
Trim17-201ENSMUST00000047697 Serp1Q9Z1W5 66 aa6.94□□□□□ -1.3
Trim17-201ENSMUST00000047697 Igkv3-2A0A075B5P0 119 aa6.93□□□□□ -1.3
Trim17-201ENSMUST00000047697 Vpreb2P13373 142 aa6.93□□□□□ -1.3
Trim17-201ENSMUST00000047697 Igkv8-28A0A0G2JE47 121 aa6.93□□□□□ -1.3
Trim17-201ENSMUST00000047697 Psors1c2Q80ZC9 134 aa6.93□□□□□ -1.3
Trim17-201ENSMUST00000047697 ApcQ61315 2845 aa6.93□□□□□ -1.3
Trim17-201ENSMUST00000047697 Ighv8-13A0A075B5Y0 101 aa6.92□□□□□ -1.3
Trim17-201ENSMUST00000047697 Gm37389A0A0A6YW05 95 aa6.92□□□□□ -1.3
Trim17-201ENSMUST00000047697 Trav14-1A0A0G2JF94 121 aa6.92□□□□□ -1.3
Trim17-201ENSMUST00000047697 Sslp1Q3UN54 99 aa6.92□□□□□ -1.3
Trim17-201ENSMUST00000047697 Elof1P60003 83 aa6.91□□□□□ -1.3
Trim17-201ENSMUST00000047697 Igkv4-92A0A0B4J1I2 117 aa6.9□□□□□ -1.3
Trim17-201ENSMUST00000047697 Ube2bP63147 152 aa6.9□□□□□ -1.3
Trim17-201ENSMUST00000047697 Gm17521F6QAC8 156 aa6.9□□□□□ -1.3
Trim17-201ENSMUST00000047697 A330070K13RikQ8CA53 115 aa6.9□□□□□ -1.3
Trim17-201ENSMUST00000047697 Gm10570F6VB42 170 aa6.89□□□□□ -1.31
Trim17-201ENSMUST00000047697 CubnQ9JLB4 3623 aa6.89□□□□□ -1.31
Trim17-201ENSMUST00000047697 A530084C06RikQ3UTW2 186 aa6.89□□□□□ -1.31
Trim17-201ENSMUST00000047697 Snhg11Q4G0K9 87 aa6.89□□□□□ -1.31
Trim17-201ENSMUST00000047697 Sprr2jO70561 109 aa6.89□□□□□ -1.31
Trim17-201ENSMUST00000047697 H2al1aQ5M8Q2 105 aa6.89□□□□□ -1.31
Trim17-201ENSMUST00000047697 Ighv2-2A0A075B5P8 116 aa6.88□□□□□ -1.31
Trim17-201ENSMUST00000047697 P01821 116 aa6.88□□□□□ -1.31
Trim17-201ENSMUST00000047697 Dph3Q8K0W9 82 aa6.88□□□□□ -1.31
Trim17-201ENSMUST00000047697 6430550D23RikE9Q1X6 194 aa6.88□□□□□ -1.31
Trim17-201ENSMUST00000047697 Gm10337F7DEP7 55 aa6.88□□□□□ -1.31
Trim17-201ENSMUST00000047697 Gm10401E9Q3K6 71 aa6.88□□□□□ -1.31
Trim17-201ENSMUST00000047697 Gm5617Q91VN2 117 aa6.87□□□□□ -1.31
Trim17-201ENSMUST00000047697 A730071L15RikQ8C4X0 137 aa6.87□□□□□ -1.31
Trim17-201ENSMUST00000047697 Smim29Q8R043 75 aa6.87□□□□□ -1.31
Trim17-201ENSMUST00000047697 Fn1P11276 2477 aaKnown RBP6.87□□□□□ -1.31
Trim17-201ENSMUST00000047697 Pou2af1Q64693 256 aa6.87□□□□□ -1.31
Trim17-201ENSMUST00000047697 UqcrqQ9CQ69 82 aa6.87□□□□□ -1.31
Trim17-201ENSMUST00000047697 Gm11213A0A1B0GR83 88 aa6.85□□□□□ -1.31
Trim17-201ENSMUST00000047697 C130032M10RikQ8C888 123 aa6.85□□□□□ -1.31
Trim17-201ENSMUST00000047697 Cox6a2P43023 97 aa6.84□□□□□ -1.31
Trim17-201ENSMUST00000047697 Pkd1l1Q8R526 2615 aa6.84□□□□□ -1.31
Trim17-201ENSMUST00000047697 Wfdc13Q5DQQ6 81 aa6.83□□□□□ -1.32
Trim17-201ENSMUST00000047697 Sprr4Q8CGN8 76 aa6.83□□□□□ -1.32
Trim17-201ENSMUST00000047697 Xirp2Q4U4S6 3784 aa6.82□□□□□ -1.32
Trim17-201ENSMUST00000047697 Gm44790A0A0N4SV91 103 aa6.82□□□□□ -1.32
Trim17-201ENSMUST00000047697 Obox2E9PXV9 151 aa6.82□□□□□ -1.32
Trim17-201ENSMUST00000047697 Mrpl34Q99N91 92 aa6.82□□□□□ -1.32
Trim17-201ENSMUST00000047697 Gm16485Q8C4B7 115 aa6.8□□□□□ -1.32
Trim17-201ENSMUST00000047697 Fam168bQ80XQ8 194 aa6.8□□□□□ -1.32
Trim17-201ENSMUST00000047697 Coa6Q8BGD8 79 aa6.79□□□□□ -1.32
Trim17-201ENSMUST00000047697 PscaP57096 123 aa6.79□□□□□ -1.32
Trim17-201ENSMUST00000047697 BaalcQ8VHV1 145 aa6.79□□□□□ -1.32
Trim17-201ENSMUST00000047697 Vpreb3D3Z6J4 130 aa6.78□□□□□ -1.32
Trim17-201ENSMUST00000047697 Itpr2Q9Z329 2701 aa6.78□□□□□ -1.32
Trim17-201ENSMUST00000047697 1700018G05RikA0A1B0GSI2 66 aa6.77□□□□□ -1.33
Trim17-201ENSMUST00000047697 Gm10197F6QEY5 67 aa6.77□□□□□ -1.33
Trim17-201ENSMUST00000047697 Q8BT88 171 aa6.77□□□□□ -1.33
Trim17-201ENSMUST00000047697 9530053A07RikE9PVG8 2581 aa6.77□□□□□ -1.33
Trim17-201ENSMUST00000047697 Igkv8-19A0A0G2JFN8 121 aa6.77□□□□□ -1.33
Trim17-201ENSMUST00000047697 Gm12353A2AGJ4 60 aa6.76□□□□□ -1.33
Trim17-201ENSMUST00000047697 Gm7138L7N2C3 230 aa6.76□□□□□ -1.33
Trim17-201ENSMUST00000047697 Gm3238W4VSP7 230 aa6.76□□□□□ -1.33
Trim17-201ENSMUST00000047697 Igkv3-4A0A140T8Q4 119 aa6.75□□□□□ -1.33
Trim17-201ENSMUST00000047697 Dmac1Q9CQ00 111 aa6.75□□□□□ -1.33
Trim17-201ENSMUST00000047697 Reg3aO09037 175 aa6.75□□□□□ -1.33
Trim17-201ENSMUST00000047697 Igkv3-12A0A140T8P0 119 aa6.75□□□□□ -1.33
Trim17-201ENSMUST00000047697 Atox1O08997 68 aaKnown RBP6.75□□□□□ -1.33
Trim17-201ENSMUST00000047697 Gm7276Q3TYW4 209 aa6.75□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 79.4 ms