RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 C530025M09RikF6RGA8 229 aa15.23■□□□□ 0.03
Sh3rf1-201ENSMUST00000034060 CnbpP53996 178 aaKnown RBP15.22■□□□□ 0.03
Sh3rf1-201ENSMUST00000034060 Hivep2Q3UHF7 2430 aa15.21■□□□□ 0.03
Sh3rf1-201ENSMUST00000034060 Phxr5P08399 672 aa15.18■□□□□ 0.02
Sh3rf1-201ENSMUST00000034060 Defb11Q8R2I7 77 aa15.18■□□□□ 0.02
Sh3rf1-201ENSMUST00000034060 Lrrk2Q5S006 2527 aa15.16■□□□□ 0.02
Sh3rf1-201ENSMUST00000034060 Chtf8P0CG14 533 aa15.16■□□□□ 0.02
Sh3rf1-201ENSMUST00000034060 Cypt15B1AXS0 87 aa15.13■□□□□ 0.01
Sh3rf1-201ENSMUST00000034060 Gm20538F6Z9R1 75 aa15.13■□□□□ 0.01
Sh3rf1-201ENSMUST00000034060 RetnlbQ99P86 105 aa15.13■□□□□ 0.01
Sh3rf1-201ENSMUST00000034060 Spata3Q9D9T6 193 aa15.11■□□□□ 0.01
Sh3rf1-201ENSMUST00000034060 Zfyve26Q5DU37 2529 aa15.1■□□□□ 0.01
Sh3rf1-201ENSMUST00000034060 Lypd5Q9D7Z7 256 aa15.1■□□□□ 0.01
Sh3rf1-201ENSMUST00000034060 Rnase13Q5GAM7 153 aa15.07■□□□□ 0
Sh3rf1-201ENSMUST00000034060 Fam229bQ8CF36 80 aa15.07■□□□□ 0
Sh3rf1-201ENSMUST00000034060 Fam104aA2A6P4 185 aa15.06■□□□□ 0
Sh3rf1-201ENSMUST00000034060 Tln1P26039 2541 aaKnown RBP15.05■□□□□ -0
Sh3rf1-201ENSMUST00000034060 Nav3Q80TN7 2359 aa14.98□□□□□ -0.01
Sh3rf1-201ENSMUST00000034060 Gm21798J3QNU5 87 aa14.98□□□□□ -0.01
Sh3rf1-201ENSMUST00000034060 CriptO70333 101 aa14.92□□□□□ -0.02
Sh3rf1-201ENSMUST00000034060 Defb9Q8R2I6 67 aa14.92□□□□□ -0.02
Sh3rf1-201ENSMUST00000034060 Hivep3A2A884 2348 aa14.92□□□□□ -0.02
Sh3rf1-201ENSMUST00000034060 Rif1Q6PR54 2419 aaKnown RBP14.91□□□□□ -0.02
Sh3rf1-201ENSMUST00000034060 Zcchc13Q9D548 170 aa14.9□□□□□ -0.02
Sh3rf1-201ENSMUST00000034060 Gm26620Q9CY65 116 aa14.88□□□□□ -0.03
Sh3rf1-201ENSMUST00000034060 Piezo2Q8CD54 2822 aa14.87□□□□□ -0.03
Sh3rf1-201ENSMUST00000034060 Ttc28Q80XJ3 2450 aa14.86□□□□□ -0.03
Sh3rf1-201ENSMUST00000034060 2310034C09RikQ9D746 214 aa14.85□□□□□ -0.03
Sh3rf1-201ENSMUST00000034060 Cypt14J3QPF7 87 aa14.78□□□□□ -0.04
Sh3rf1-201ENSMUST00000034060 Gm9955Q8CEJ8 102 aa14.77□□□□□ -0.05
Sh3rf1-201ENSMUST00000034060 Cep192E9Q4Y4 2514 aaKnown RBP14.72□□□□□ -0.05
Sh3rf1-201ENSMUST00000034060 Pkd1l2Q7TN88 2461 aa14.71□□□□□ -0.05
Sh3rf1-201ENSMUST00000034060 Usp9xP70398 2559 aaKnown RBP14.65□□□□□ -0.06
Sh3rf1-201ENSMUST00000034060 Zfp462B1AWL2 2495 aaKnown RBP14.63□□□□□ -0.07
Sh3rf1-201ENSMUST00000034060 Anapc11Q9CPX9 84 aa14.63□□□□□ -0.07
Sh3rf1-201ENSMUST00000034060 6030445D17RikE9Q8F9 148 aa14.61□□□□□ -0.07
Sh3rf1-201ENSMUST00000034060 Gm3880A0A1B0GSB3 72 aa14.6□□□□□ -0.07
Sh3rf1-201ENSMUST00000034060 Piezo1E2JF22 2547 aa14.6□□□□□ -0.07
Sh3rf1-201ENSMUST00000034060 Gm10320E9PW43 113 aa14.59□□□□□ -0.07
Sh3rf1-201ENSMUST00000034060 Gm3250E9Q1M3 230 aa14.59□□□□□ -0.07
Sh3rf1-201ENSMUST00000034060 Cystm1Q8K353 104 aa14.54□□□□□ -0.08
Sh3rf1-201ENSMUST00000034060 Smim29Q8R043 75 aa14.54□□□□□ -0.08
Sh3rf1-201ENSMUST00000034060 NbdyA0A0N4SUI7 68 aa14.53□□□□□ -0.08
Sh3rf1-201ENSMUST00000034060 Notch2O35516 2470 aa14.53□□□□□ -0.08
Sh3rf1-201ENSMUST00000034060 Gm10065F6TJM2 114 aa14.51□□□□□ -0.09
Sh3rf1-201ENSMUST00000034060 PtprqP0C5E4 2300 aa14.5□□□□□ -0.09
Sh3rf1-201ENSMUST00000034060 Gm11565A2A4M7 156 aa14.47□□□□□ -0.09
Sh3rf1-201ENSMUST00000034060 Gm3646F6S692 53 aa14.47□□□□□ -0.09
Sh3rf1-201ENSMUST00000034060 Plac8Q9JI48 112 aa14.47□□□□□ -0.09
Sh3rf1-201ENSMUST00000034060 Sptbn4E9PX29 2561 aa14.46□□□□□ -0.09
Sh3rf1-201ENSMUST00000034060 Pla2g10Q9QXX3 151 aa14.45□□□□□ -0.1
Sh3rf1-201ENSMUST00000034060 SetxA2AKX3 2646 aa14.45□□□□□ -0.1
Sh3rf1-201ENSMUST00000034060 Gm10139O88245 57 aa14.44□□□□□ -0.1
Sh3rf1-201ENSMUST00000034060 Gm4491E0CX42 125 aa14.41□□□□□ -0.1
Sh3rf1-201ENSMUST00000034060 PolqQ8CGS6 2544 aa14.38□□□□□ -0.11
Sh3rf1-201ENSMUST00000034060 OxtP35454 125 aa14.32□□□□□ -0.12
Sh3rf1-201ENSMUST00000034060 Ptpn13Q64512 2453 aa14.32□□□□□ -0.12
Sh3rf1-201ENSMUST00000034060 Odf3bQ5M8M2 238 aa14.32□□□□□ -0.12
Sh3rf1-201ENSMUST00000034060 A730071L15RikQ8C4X0 137 aa14.29□□□□□ -0.12
Sh3rf1-201ENSMUST00000034060 Gm37013Q8K491 104 aa14.27□□□□□ -0.12
Sh3rf1-201ENSMUST00000034060 Sprr1aQ62266 144 aa14.25□□□□□ -0.13
Sh3rf1-201ENSMUST00000034060 Gm9821Q8K076 103 aa14.24□□□□□ -0.13
Sh3rf1-201ENSMUST00000034060 4933415A04RikQ9D443 101 aa14.21□□□□□ -0.13
Sh3rf1-201ENSMUST00000034060 1700042G07RikB1AUF7 90 aa14.2□□□□□ -0.14
Sh3rf1-201ENSMUST00000034060 Setd2E9Q5F9 2537 aa14.18□□□□□ -0.14
Sh3rf1-201ENSMUST00000034060 Epg5Q80TA9 2572 aa14.18□□□□□ -0.14
Sh3rf1-201ENSMUST00000034060 Gm16253D3Z167 63 aa14.17□□□□□ -0.14
Sh3rf1-201ENSMUST00000034060 Dmbt1Q60997 2085 aa14.14□□□□□ -0.15
Sh3rf1-201ENSMUST00000034060 Chd8Q09XV5 2582 aaKnown RBP14.14□□□□□ -0.15
Sh3rf1-201ENSMUST00000034060 TrrapQ80YV3 2565 aaKnown RBP14.12□□□□□ -0.15
Sh3rf1-201ENSMUST00000034060 MtorQ9JLN9 2549 aa14.09□□□□□ -0.15
Sh3rf1-201ENSMUST00000034060 SmcpP15265 143 aa14.08□□□□□ -0.16
Sh3rf1-201ENSMUST00000034060 Spink7Q6IE32 76 aa14.05□□□□□ -0.16
Sh3rf1-201ENSMUST00000034060 Romo1P60603 79 aa14.03□□□□□ -0.16
Sh3rf1-201ENSMUST00000034060 Gm3233E9Q2H5 230 aa13.99□□□□□ -0.17
Sh3rf1-201ENSMUST00000034060 Rpl37Q9D823 97 aa13.98□□□□□ -0.17
Sh3rf1-201ENSMUST00000034060 Ankrd17Q99NH0 2603 aaKnown RBP13.96□□□□□ -0.17
Sh3rf1-201ENSMUST00000034060 Bahcc1Q3UHR0 2643 aa13.94□□□□□ -0.18
Sh3rf1-201ENSMUST00000034060 Lelp1Q9DAE3 120 aa13.9□□□□□ -0.18
Sh3rf1-201ENSMUST00000034060 SrcapA0A087WQ44 3271 aa13.9□□□□□ -0.18
Sh3rf1-201ENSMUST00000034060 Nbeal1E9PYP2 2688 aa13.89□□□□□ -0.19
Sh3rf1-201ENSMUST00000034060 Camk2n1Q6QWF9 78 aa13.87□□□□□ -0.19
Sh3rf1-201ENSMUST00000034060 Gm7138L7N2C3 230 aa13.77□□□□□ -0.2
Sh3rf1-201ENSMUST00000034060 Gm3238W4VSP7 230 aa13.77□□□□□ -0.2
Sh3rf1-201ENSMUST00000034060 Krtap29-1A2A5X4 342 aa13.74□□□□□ -0.21
Sh3rf1-201ENSMUST00000034060 Gm10382Q3V0T5 144 aa13.72□□□□□ -0.21
Sh3rf1-201ENSMUST00000034060 Krtap15-1Q9QZU5 150 aa13.72□□□□□ -0.21
Sh3rf1-201ENSMUST00000034060 Gm2310J3QNJ2 377 aa13.69□□□□□ -0.22
Sh3rf1-201ENSMUST00000034060 Abca12E9Q876 2595 aa13.68□□□□□ -0.22
Sh3rf1-201ENSMUST00000034060 Usp9yF8VPU6 2556 aa13.66□□□□□ -0.22
Sh3rf1-201ENSMUST00000034060 CenpfE9Q3P4 2997 aaKnown RBP13.66□□□□□ -0.22
Sh3rf1-201ENSMUST00000034060 Fam229aB2KGE5 128 aa13.63□□□□□ -0.23
Sh3rf1-201ENSMUST00000034060 Cox6b2Q80ZN9 88 aa13.63□□□□□ -0.23
Sh3rf1-201ENSMUST00000034060 Unc79Q0KK59 2596 aa13.6□□□□□ -0.23
Sh3rf1-201ENSMUST00000034060 Gm5767A0A0J9YTU8 78 aa13.58□□□□□ -0.24
Sh3rf1-201ENSMUST00000034060 BC029722A0A0N4SW31 51 aa13.55□□□□□ -0.24
Sh3rf1-201ENSMUST00000034060 Sec61bQ9CQS8 96 aaKnown RBP13.49□□□□□ -0.25
Sh3rf1-201ENSMUST00000034060 Gm9508A0A1W2P7W0 230 aa13.49□□□□□ -0.25
Sh3rf1-201ENSMUST00000034060 Nsd1O88491 2588 aaKnown RBP13.48□□□□□ -0.25
Sh3rf1-201ENSMUST00000034060 Gm19426M0QWC7 77 aa13.45□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms