RNA–Protein interactions for RNA: ENSMUST00000027438.7

Ncl-201, Transcript of Nucleolin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncl, Length 8,202 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncl-201ENSMUST00000027438 Anapc11Q9CPX9 84 aa4.63□□□□□ -1.67
Ncl-201ENSMUST00000027438 Fam168bQ80XQ8 194 aa4.62□□□□□ -1.67
Ncl-201ENSMUST00000027438 Uqcr11Q9CPX8 56 aa4.62□□□□□ -1.67
Ncl-201ENSMUST00000027438 Gm26602M0QWA4 95 aa4.61□□□□□ -1.67
Ncl-201ENSMUST00000027438 Znf239P24399 201 aa4.61□□□□□ -1.67
Ncl-201ENSMUST00000027438 CdsnQ7TPC1 561 aa4.61□□□□□ -1.67
Ncl-201ENSMUST00000027438 Fam104aA2A6P4 185 aa4.61□□□□□ -1.67
Ncl-201ENSMUST00000027438 Defb9Q8R2I6 67 aa4.61□□□□□ -1.67
Ncl-201ENSMUST00000027438 Cypt15B1AXS0 87 aa4.58□□□□□ -1.68
Ncl-201ENSMUST00000027438 A330070K13RikQ8CA53 115 aa4.58□□□□□ -1.68
Ncl-201ENSMUST00000027438 HrnrQ8VHD8 2496 aa4.58□□□□□ -1.68
Ncl-201ENSMUST00000027438 CicQ924A2 2510 aa4.58□□□□□ -1.68
Ncl-201ENSMUST00000027438 Gm9955Q8CEJ8 102 aa4.57□□□□□ -1.68
Ncl-201ENSMUST00000027438 Wdfy3Q6VNB8 3508 aa4.57□□□□□ -1.68
Ncl-201ENSMUST00000027438 Gm10337F7DEP7 55 aa4.57□□□□□ -1.68
Ncl-201ENSMUST00000027438 Col4a2P08122 1707 aa4.57□□□□□ -1.68
Ncl-201ENSMUST00000027438 Q8BT88 171 aa4.57□□□□□ -1.68
Ncl-201ENSMUST00000027438 Unc80Q8BLN6 3261 aa4.57□□□□□ -1.68
Ncl-201ENSMUST00000027438 4930524J08RikQ9CUJ5 163 aa4.56□□□□□ -1.68
Ncl-201ENSMUST00000027438 Chd8Q09XV5 2582 aaKnown RBP4.56□□□□□ -1.68
Ncl-201ENSMUST00000027438 Sptbn4E9PX29 2561 aa4.56□□□□□ -1.68
Ncl-201ENSMUST00000027438 Krtap27-1E9PX37 202 aa4.54□□□□□ -1.68
Ncl-201ENSMUST00000027438 Crip3Q6Q6R3 243 aa4.54□□□□□ -1.68
Ncl-201ENSMUST00000027438 TrrapQ80YV3 2565 aaKnown RBP4.53□□□□□ -1.68
Ncl-201ENSMUST00000027438 4930432M17RikQ3V0W9 174 aa4.53□□□□□ -1.68
Ncl-201ENSMUST00000027438 Gm19935A0A1B0GSF9 52 aa4.51□□□□□ -1.69
Ncl-201ENSMUST00000027438 Gm21060J3KMU4 56 aa4.51□□□□□ -1.69
Ncl-201ENSMUST00000027438 Cdh23Q99PF4 3354 aa4.51□□□□□ -1.69
Ncl-201ENSMUST00000027438 Elof1P60003 83 aa4.51□□□□□ -1.69
Ncl-201ENSMUST00000027438 Gm4491E0CX42 125 aa4.5□□□□□ -1.69
Ncl-201ENSMUST00000027438 Gm10197F6QEY5 67 aa4.5□□□□□ -1.69
Ncl-201ENSMUST00000027438 PolqQ8CGS6 2544 aa4.49□□□□□ -1.69
Ncl-201ENSMUST00000027438 Gm3285A0A1W2P7U0 201 aa4.49□□□□□ -1.69
Ncl-201ENSMUST00000027438 Gm3880A0A1B0GSB3 72 aa4.49□□□□□ -1.69
Ncl-201ENSMUST00000027438 Col27a1Q5QNQ9 1845 aa4.48□□□□□ -1.69
Ncl-201ENSMUST00000027438 B430305J03RikQ8BQQ8 176 aa4.48□□□□□ -1.69
Ncl-201ENSMUST00000027438 Gm21798J3QNU5 87 aa4.48□□□□□ -1.69
Ncl-201ENSMUST00000027438 C530025M09RikF6RGA8 229 aa4.47□□□□□ -1.69
Ncl-201ENSMUST00000027438 Zcchc13Q9D548 170 aa4.47□□□□□ -1.69
Ncl-201ENSMUST00000027438 2310034C09RikQ9D746 214 aa4.47□□□□□ -1.69
Ncl-201ENSMUST00000027438 Usp9yF8VPU6 2556 aa4.47□□□□□ -1.69
Ncl-201ENSMUST00000027438 Phxr4P15974 95 aa4.46□□□□□ -1.69
Ncl-201ENSMUST00000027438 Gm10382Q3V0T5 144 aa4.46□□□□□ -1.69
Ncl-201ENSMUST00000027438 P0C913 63 aa4.46□□□□□ -1.7
Ncl-201ENSMUST00000027438 Brca2P97929 3329 aa4.45□□□□□ -1.7
Ncl-201ENSMUST00000027438 Gm11213A0A1B0GR83 88 aa4.44□□□□□ -1.7
Ncl-201ENSMUST00000027438 Gm5767A0A0J9YTU8 78 aa4.43□□□□□ -1.7
Ncl-201ENSMUST00000027438 Usp24B1AY13 2617 aaKnown RBP4.42□□□□□ -1.7
Ncl-201ENSMUST00000027438 Piezo2Q8CD54 2822 aa4.42□□□□□ -1.7
Ncl-201ENSMUST00000027438 Dchs2A0A0A6YW72 3346 aa4.41□□□□□ -1.7
Ncl-201ENSMUST00000027438 Muc5acE9QAQ8 3455 aa4.4□□□□□ -1.7
Ncl-201ENSMUST00000027438 Gm3233E9Q2H5 230 aa4.4□□□□□ -1.71
Ncl-201ENSMUST00000027438 Smr3aQ61900 147 aa4.39□□□□□ -1.71
Ncl-201ENSMUST00000027438 MtorQ9JLN9 2549 aa4.39□□□□□ -1.71
Ncl-201ENSMUST00000027438 Smim1P0C8K7 78 aa4.39□□□□□ -1.71
Ncl-201ENSMUST00000027438 Ep400Q8CHI8 3072 aaKnown RBP4.38□□□□□ -1.71
Ncl-201ENSMUST00000027438 BC029722A0A0N4SW31 51 aa4.38□□□□□ -1.71
Ncl-201ENSMUST00000027438 Krtap11-1E9Q2E9 183 aa4.38□□□□□ -1.71
Ncl-201ENSMUST00000027438 Ankrd17Q99NH0 2603 aaKnown RBP4.38□□□□□ -1.71
Ncl-201ENSMUST00000027438 Szt2A2A9C3 3431 aa4.38□□□□□ -1.71
Ncl-201ENSMUST00000027438 Epg5Q80TA9 2572 aa4.37□□□□□ -1.71
Ncl-201ENSMUST00000027438 Gm9573F7C950 1606 aa4.37□□□□□ -1.71
Ncl-201ENSMUST00000027438 AY074887Q8R5F9 132 aa4.36□□□□□ -1.71
Ncl-201ENSMUST00000027438 NbdyA0A0N4SUI7 68 aa4.36□□□□□ -1.71
Ncl-201ENSMUST00000027438 Fn1P11276 2477 aaKnown RBP4.35□□□□□ -1.71
Ncl-201ENSMUST00000027438 Gm7138L7N2C3 230 aa4.35□□□□□ -1.71
Ncl-201ENSMUST00000027438 Gm3238W4VSP7 230 aa4.35□□□□□ -1.71
Ncl-201ENSMUST00000027438 Gm42715A0A087WP63 3095 aaKnown RBP4.35□□□□□ -1.71
Ncl-201ENSMUST00000027438 Znf580Q9DB38 172 aa4.35□□□□□ -1.71
Ncl-201ENSMUST00000027438 Gm7137J3QMW1 236 aa4.35□□□□□ -1.71
Ncl-201ENSMUST00000027438 Sprr4Q8CGN8 76 aa4.34□□□□□ -1.71
Ncl-201ENSMUST00000027438 4930518I15RikQ3V2W7 57 aa4.33□□□□□ -1.72
Ncl-201ENSMUST00000027438 Coa5Q99M07 74 aa4.32□□□□□ -1.72
Ncl-201ENSMUST00000027438 Gm17349F7BGH6 99 aa4.32□□□□□ -1.72
Ncl-201ENSMUST00000027438 CnbpP53996 178 aaKnown RBP4.32□□□□□ -1.72
Ncl-201ENSMUST00000027438 Tnp2P11378 117 aa4.32□□□□□ -1.72
Ncl-201ENSMUST00000027438 Cypt14J3QPF7 87 aa4.31□□□□□ -1.72
Ncl-201ENSMUST00000027438 Gm9112A2AI92 75 aa4.31□□□□□ -1.72
Ncl-201ENSMUST00000027438 CnfnQ6PCW6 111 aa4.31□□□□□ -1.72
Ncl-201ENSMUST00000027438 Ankrd11E9Q4F7 2643 aa4.31□□□□□ -1.72
Ncl-201ENSMUST00000027438 Krtap29-1A2A5X4 342 aa4.3□□□□□ -1.72
Ncl-201ENSMUST00000027438 FasnP19096 2504 aaKnown RBP4.3□□□□□ -1.72
Ncl-201ENSMUST00000027438 Myo15aQ9QZZ4 3511 aa4.29□□□□□ -1.72
Ncl-201ENSMUST00000027438 Abca12E9Q876 2595 aa4.29□□□□□ -1.72
Ncl-201ENSMUST00000027438 Romo1P60603 79 aa4.29□□□□□ -1.72
Ncl-201ENSMUST00000027438 Dnah12Q3V0Q1 3086 aa4.28□□□□□ -1.72
Ncl-201ENSMUST00000027438 Setd2E9Q5F9 2537 aa4.28□□□□□ -1.72
Ncl-201ENSMUST00000027438 Usp9xP70398 2559 aaKnown RBP4.28□□□□□ -1.73
Ncl-201ENSMUST00000027438 Sprr1bQ62267 153 aa4.27□□□□□ -1.73
Ncl-201ENSMUST00000027438 Jbts17Q8CE72 3214 aa4.27□□□□□ -1.73
Ncl-201ENSMUST00000027438 A530084C06RikQ3UTW2 186 aa4.26□□□□□ -1.73
Ncl-201ENSMUST00000027438 DmdP11531 3678 aa4.26□□□□□ -1.73
Ncl-201ENSMUST00000027438 6030445D17RikE9Q8F9 148 aa4.26□□□□□ -1.73
Ncl-201ENSMUST00000027438 Krtap26-1Q9D7N2 215 aa4.26□□□□□ -1.73
Ncl-201ENSMUST00000027438 Gm10065F6TJM2 114 aa4.25□□□□□ -1.73
Ncl-201ENSMUST00000027438 Gm10772F7AIG4 85 aa4.24□□□□□ -1.73
Ncl-201ENSMUST00000027438 VcanQ62059 3357 aa4.24□□□□□ -1.73
Ncl-201ENSMUST00000027438 Cep350E9Q309 3095 aa4.22□□□□□ -1.73
Ncl-201ENSMUST00000027438 Nsd1O88491 2588 aaKnown RBP4.22□□□□□ -1.73
Ncl-201ENSMUST00000027438 Odf3bQ5M8M2 238 aa4.21□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 97.7 ms