RNA–Protein interactions for RNA: ENSMUST00000152946.7

Ldb1-206, Transcript of LIM domain-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ldb1, Length 2,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-206ENSMUST00000152946 B230359F08RikA0A0B4J1K3 109 aa17.6■□□□□ 0.41
Ldb1-206ENSMUST00000152946 Defa16P50714 93 aa17.59■□□□□ 0.41
Ldb1-206ENSMUST00000152946 Ighv8-13A0A075B5Y0 101 aa17.59■□□□□ 0.41
Ldb1-206ENSMUST00000152946 Sprr1bQ62267 153 aa17.59■□□□□ 0.41
Ldb1-206ENSMUST00000152946 Defb10Q8R2I8 73 aa17.59■□□□□ 0.41
Ldb1-206ENSMUST00000152946 Tcl1b3P56842 122 aa17.58■□□□□ 0.4
Ldb1-206ENSMUST00000152946 Igkv3-9A0A140T8P4 119 aa17.57■□□□□ 0.4
Ldb1-206ENSMUST00000152946 Defa25Q5G864 92 aa17.57■□□□□ 0.4
Ldb1-206ENSMUST00000152946 Srrm2Q8BTI8 2703 aaKnown RBP17.57■□□□□ 0.4
Ldb1-206ENSMUST00000152946 Spata3Q9D9T6 193 aa17.57■□□□□ 0.4
Ldb1-206ENSMUST00000152946 Hbb-b2P02089 147 aa17.56■□□□□ 0.4
Ldb1-206ENSMUST00000152946 Igf1P05017 153 aa17.56■□□□□ 0.4
Ldb1-206ENSMUST00000152946 Gm36176A0A1W2P8D5 158 aa17.56■□□□□ 0.4
Ldb1-206ENSMUST00000152946 4930519P11RikQ9CUJ8 166 aa17.54■□□□□ 0.4
Ldb1-206ENSMUST00000152946 Ighv8-11A0A075B5X4 119 aa17.53■□□□□ 0.4
Ldb1-206ENSMUST00000152946 Igkv6-13A0A0G2JGY3 119 aa17.51■□□□□ 0.39
Ldb1-206ENSMUST00000152946 Hist1h4aP62806 103 aaKnown RBP17.51■□□□□ 0.39
Ldb1-206ENSMUST00000152946 ApcQ61315 2845 aa17.51■□□□□ 0.39
Ldb1-206ENSMUST00000152946 1810062G17RikG3X8Y2 129 aa17.51■□□□□ 0.39
Ldb1-206ENSMUST00000152946 Ntn5Q3UQ22 452 aa17.51■□□□□ 0.39
Ldb1-206ENSMUST00000152946 Gm5142Q8C5X9 133 aa17.51■□□□□ 0.39
Ldb1-206ENSMUST00000152946 Bles03Q8VD62 251 aa17.51■□□□□ 0.39
Ldb1-206ENSMUST00000152946 6430550D23RikE9Q1X6 194 aa17.5■□□□□ 0.39
Ldb1-206ENSMUST00000152946 Trav13-1A0A075B644 110 aa17.48■□□□□ 0.39
Ldb1-206ENSMUST00000152946 PtprqP0C5E4 2300 aa17.47■□□□□ 0.39
Ldb1-206ENSMUST00000152946 Ifitm6A0A1B0GS75 124 aa17.47■□□□□ 0.39
Ldb1-206ENSMUST00000152946 Col6a5A6H584 2640 aa17.47■□□□□ 0.39
Ldb1-206ENSMUST00000152946 Trav13n-2A0A0G2JF93 110 aa17.46■□□□□ 0.39
Ldb1-206ENSMUST00000152946 Defa2P28309 93 aa17.45■□□□□ 0.38
Ldb1-206ENSMUST00000152946 Igkv8-18A0A0B4J1J3 123 aa17.44■□□□□ 0.38
Ldb1-206ENSMUST00000152946 Gm10845Q3UNY9 185 aa17.43■□□□□ 0.38
Ldb1-206ENSMUST00000152946 Trav9n-4A0A075B631 113 aa17.42■□□□□ 0.38
Ldb1-206ENSMUST00000152946 Rpl39lQ9CQD0 51 aa17.42■□□□□ 0.38
Ldb1-206ENSMUST00000152946 Igkv8-34A0A0G2JDU0 121 aa17.42■□□□□ 0.38
Ldb1-206ENSMUST00000152946 Gm7102J3QQ10 178 aa17.42■□□□□ 0.38
Ldb1-206ENSMUST00000152946 Kmt2aP55200 3966 aa17.42■□□□□ 0.38
Ldb1-206ENSMUST00000152946 Gm5153P01627 120 aa17.41■□□□□ 0.38
Ldb1-206ENSMUST00000152946 Rpl18aP62717 176 aaKnown RBP17.41■□□□□ 0.38
Ldb1-206ENSMUST00000152946 Csdc2Q91YQ3 154 aa17.41■□□□□ 0.38
Ldb1-206ENSMUST00000152946 P01819 144 aa17.41■□□□□ 0.38
Ldb1-206ENSMUST00000152946 Tmem86bQ497J1 226 aa17.4■□□□□ 0.38
Ldb1-206ENSMUST00000152946 Prh1P05142 261 aa17.39■□□□□ 0.37
Ldb1-206ENSMUST00000152946 Tmem254aP0DN89 123 aa17.38■□□□□ 0.37
Ldb1-206ENSMUST00000152946 Tmem254bP0DN90 123 aa17.38■□□□□ 0.37
Ldb1-206ENSMUST00000152946 Tmem254cP0DN91 123 aa17.38■□□□□ 0.37
Ldb1-206ENSMUST00000152946 7530416G11RikJ3QJX6 159 aa17.37■□□□□ 0.37
Ldb1-206ENSMUST00000152946 D130052B06RikQ3UW13 202 aa17.37■□□□□ 0.37
Ldb1-206ENSMUST00000152946 Igkv3-1A0A075B5P1 119 aa17.36■□□□□ 0.37
Ldb1-206ENSMUST00000152946 ScxQ64124 207 aa17.36■□□□□ 0.37
Ldb1-206ENSMUST00000152946 Gm16181B0V2H2 73 aa17.35■□□□□ 0.37
Ldb1-206ENSMUST00000152946 Tcl1b5P56845 121 aa17.35■□□□□ 0.37
Ldb1-206ENSMUST00000152946 Snhg11Q4G0K9 87 aa17.35■□□□□ 0.37
Ldb1-206ENSMUST00000152946 Ighv10-3A0A075B5T6 119 aa17.32■□□□□ 0.36
Ldb1-206ENSMUST00000152946 Ighv2-9A0A075B5Q5 116 aa17.32■□□□□ 0.36
Ldb1-206ENSMUST00000152946 Krtap11-1E9Q2E9 183 aa17.32■□□□□ 0.36
Ldb1-206ENSMUST00000152946 C530025M09RikF6RGA8 229 aa17.31■□□□□ 0.36
Ldb1-206ENSMUST00000152946 Gm7137J3QMW1 236 aa17.31■□□□□ 0.36
Ldb1-206ENSMUST00000152946 4930556J24RikQ9D4U7 146 aa17.31■□□□□ 0.36
Ldb1-206ENSMUST00000152946 Q9DAA7 145 aa17.31■□□□□ 0.36
Ldb1-206ENSMUST00000152946 Inafm2A0A1L1STD6 152 aa17.3■□□□□ 0.36
Ldb1-206ENSMUST00000152946 CnbpP53996 178 aaKnown RBP17.3■□□□□ 0.36
Ldb1-206ENSMUST00000152946 EnhoQ8K1D8 76 aa17.3■□□□□ 0.36
Ldb1-206ENSMUST00000152946 Notch1Q01705 2531 aa17.3■□□□□ 0.36
Ldb1-206ENSMUST00000152946 Cox7bP56393 80 aa17.29■□□□□ 0.36
Ldb1-206ENSMUST00000152946 Serp2Q6TAW2 65 aa17.29■□□□□ 0.36
Ldb1-206ENSMUST00000152946 Trav13-2A0A075B649 110 aa17.29■□□□□ 0.36
Ldb1-206ENSMUST00000152946 E130208F15RikQ3UPV3 143 aa17.29■□□□□ 0.36
Ldb1-206ENSMUST00000152946 Gm11213A0A1B0GR83 88 aa17.28■□□□□ 0.36
Ldb1-206ENSMUST00000152946 2010109I03RikQ9CQ11 111 aa17.27■□□□□ 0.35
Ldb1-206ENSMUST00000152946 Gm10308Q9CVR5 141 aa17.26■□□□□ 0.35
Ldb1-206ENSMUST00000152946 Ormdl1Q921I0 153 aa17.26■□□□□ 0.35
Ldb1-206ENSMUST00000152946 AplnQ9R0R4 77 aa17.26■□□□□ 0.35
Ldb1-206ENSMUST00000152946 Gm3618D3Z4P5 127 aa17.25■□□□□ 0.35
Ldb1-206ENSMUST00000152946 Gm9903Q8C9Y8 129 aa17.25■□□□□ 0.35
Ldb1-206ENSMUST00000152946 Gm2916Q9D9B9 127 aa17.25■□□□□ 0.35
Ldb1-206ENSMUST00000152946 Igkv2-109A0A075B5K6 120 aa17.24■□□□□ 0.35
Ldb1-206ENSMUST00000152946 MifP34884 115 aaKnown RBP17.24■□□□□ 0.35
Ldb1-206ENSMUST00000152946 Dnah3Q8BW94 4083 aa17.23■□□□□ 0.35
Ldb1-206ENSMUST00000152946 Reg3bP35230 175 aa17.23■□□□□ 0.35
Ldb1-206ENSMUST00000152946 Klk12B2RVZ0 247 aa17.22■□□□□ 0.35
Ldb1-206ENSMUST00000152946 Gm20726G3UX18 150 aa17.22■□□□□ 0.35
Ldb1-206ENSMUST00000152946 Gm10518F6UQQ9 182 aa17.21■□□□□ 0.35
Ldb1-206ENSMUST00000152946 Ighv10-1A0A0B4J1J6 119 aa17.21■□□□□ 0.35
Ldb1-206ENSMUST00000152946 Ube2d4D3YUH6 135 aa17.21■□□□□ 0.35
Ldb1-206ENSMUST00000152946 Igkv8-26A0A075B5N5 123 aa17.2■□□□□ 0.34
Ldb1-206ENSMUST00000152946 Defa7P50705 93 aa17.2■□□□□ 0.34
Ldb1-206ENSMUST00000152946 Cystm1Q8K353 104 aa17.2■□□□□ 0.34
Ldb1-206ENSMUST00000152946 Dnah6E9Q0B6 4144 aa17.19■□□□□ 0.34
Ldb1-206ENSMUST00000152946 Mrpl52Q9D0Y8 121 aa17.18■□□□□ 0.34
Ldb1-206ENSMUST00000152946 Ubl5Q9EPV8 73 aa17.18■□□□□ 0.34
Ldb1-206ENSMUST00000152946 Igkv8-16A0A0G2JDG9 121 aa17.18■□□□□ 0.34
Ldb1-206ENSMUST00000152946 Igkv8-24A0A140T8P5 121 aa17.18■□□□□ 0.34
Ldb1-206ENSMUST00000152946 Igkv8-21A0A140T8P7 120 aa17.16■□□□□ 0.34
Ldb1-206ENSMUST00000152946 Sslp1Q3UN54 99 aa17.16■□□□□ 0.34
Ldb1-206ENSMUST00000152946 Reg3dQ9QUS9 175 aa17.16■□□□□ 0.34
Ldb1-206ENSMUST00000152946 Rps28P62858 69 aaKnown RBP17.15■□□□□ 0.34
Ldb1-206ENSMUST00000152946 4930518I15RikQ3V2W7 57 aa17.15■□□□□ 0.34
Ldb1-206ENSMUST00000152946 Gm9805F6YK59 57 aa17.15■□□□□ 0.34
Ldb1-206ENSMUST00000152946 Ighv2-5A0A0A6YY69 116 aa17.14■□□□□ 0.33
Ldb1-206ENSMUST00000152946 Ighv13-2A0A0A6YWN3 119 aa17.14■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 63.7 ms