RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Ccl21cP86793 133 aa4.25□□□□□ -1.73
Ubr4-201ENSMUST00000097822 Ighv2-9-1A0A075B697 116 aa4.24□□□□□ -1.73
Ubr4-201ENSMUST00000097822 Mrpl34Q99N91 92 aa4.24□□□□□ -1.73
Ubr4-201ENSMUST00000097822 Defb42Q8BVB5 75 aa4.24□□□□□ -1.73
Ubr4-201ENSMUST00000097822 Defb37Q7TMD2 62 aa4.23□□□□□ -1.73
Ubr4-201ENSMUST00000097822 CrygfQ9CXV3 174 aa4.23□□□□□ -1.73
Ubr4-201ENSMUST00000097822 Gm9903Q8C9Y8 129 aa4.23□□□□□ -1.73
Ubr4-201ENSMUST00000097822 Dmbt1Q60997 2085 aa4.23□□□□□ -1.73
Ubr4-201ENSMUST00000097822 Gm10160F6Y577 67 aa4.23□□□□□ -1.73
Ubr4-201ENSMUST00000097822 Gm5617Q91VN2 117 aa4.22□□□□□ -1.73
Ubr4-201ENSMUST00000097822 Coa5Q99M07 74 aa4.22□□□□□ -1.73
Ubr4-201ENSMUST00000097822 Ttc28Q80XJ3 2450 aa4.22□□□□□ -1.73
Ubr4-201ENSMUST00000097822 Ly6c2P0CW03 131 aa4.22□□□□□ -1.73
Ubr4-201ENSMUST00000097822 Igkv3-7A0A0G2JE31 119 aa4.22□□□□□ -1.73
Ubr4-201ENSMUST00000097822 Reg3aO09037 175 aa4.21□□□□□ -1.73
Ubr4-201ENSMUST00000097822 FshbQ60687 130 aa4.21□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Msrb1Q9JLC3 116 aa4.21□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Pla2g1bQ9Z0Y2 146 aa4.21□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Dnah12Q3V0Q1 3086 aa4.21□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Usp9xP70398 2559 aaKnown RBP4.21□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Gm10643Q3URG9 111 aa4.21□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Cox6a2P43023 97 aa4.2□□□□□ -1.74
Ubr4-201ENSMUST00000097822 A930009A15RikG3UYI6 118 aa4.2□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Znf575Q3TXZ1 239 aa4.2□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Fam229bQ8CF36 80 aa4.2□□□□□ -1.74
Ubr4-201ENSMUST00000097822 CnbpP53996 178 aaKnown RBP4.2□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Ccdc179J3QM76 67 aa4.19□□□□□ -1.74
Ubr4-201ENSMUST00000097822 C130032M10RikQ8C888 123 aa4.19□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Gm9913Q8BQQ2 135 aa4.19□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Ighv2-9A0A075B5Q5 116 aa4.18□□□□□ -1.74
Ubr4-201ENSMUST00000097822 1810062G17RikG3X8Y2 129 aa4.18□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Phxr4P15974 95 aa4.18□□□□□ -1.74
Ubr4-201ENSMUST00000097822 CrygaP04345 174 aa4.18□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Gm4707V9GXN5 68 aa4.18□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Gm10770F7D043 238 aa4.18□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Erdr1J3QMM0 206 aa4.18□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Gm17509Q9CZ61 145 aa4.18□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Wfdc6bF6ULY1 148 aa4.17□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Gm20661K7N787 53 aa4.17□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Zfp462B1AWL2 2495 aaKnown RBP4.17□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Igkv8-19A0A0G2JFN8 121 aa4.17□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Limd2Q8BGB5 128 aa4.17□□□□□ -1.74
Ubr4-201ENSMUST00000097822 UtrnE9Q6R7 3430 aa4.17□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Gm44790A0A0N4SV91 103 aa4.16□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Prr9Q8BV84 116 aa4.16□□□□□ -1.74
Ubr4-201ENSMUST00000097822 MobpQ9D2P8 170 aa4.16□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Gm3443F7CCV5 94 aa4.16□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Gm21886J3QJU9 214 aa4.16□□□□□ -1.74
Ubr4-201ENSMUST00000097822 Gm28230A0A0A0MQ91 144 aa4.15□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Wfdc3Q14AE4 130 aa4.15□□□□□ -1.75
Ubr4-201ENSMUST00000097822 1700018G05RikA0A1B0GSI2 66 aa4.15□□□□□ -1.75
Ubr4-201ENSMUST00000097822 U90926O08546 118 aa4.14□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Setd2E9Q5F9 2537 aa4.14□□□□□ -1.75
Ubr4-201ENSMUST00000097822 PscaP57096 123 aa4.14□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Gm12216A0A1W2P827 62 aa4.14□□□□□ -1.75
Ubr4-201ENSMUST00000097822 SmcpP15265 143 aa4.14□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Elof1P60003 83 aa4.14□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Defb18Q30KP5 85 aa4.13□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Gm9573F7C950 1606 aa4.13□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Wfdc15aQ8BH89 80 aa4.13□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Znf414Q9DCK4 299 aa4.13□□□□□ -1.75
Ubr4-201ENSMUST00000097822 SycnQ8VCK7 134 aa4.13□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Igkv8-28A0A0G2JE47 121 aa4.12□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Lrrk2Q5S006 2527 aa4.12□□□□□ -1.75
Ubr4-201ENSMUST00000097822 A730009L09RikA0A1B0GS82 72 aa4.12□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Q8BT88 171 aa4.12□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Cystm1Q8K353 104 aa4.12□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Ptpn13Q64512 2453 aa4.12□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Gm9767G3X930 207 aa4.11□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Wfdc11A2A5H7 82 aa4.11□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Lama2Q60675 3118 aaKnown RBP4.11□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Mp68P56379 58 aa4.11□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Gm43218A0A0G2JGT0 114 aa4.1□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Q8K1L6 76 aa4.1□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Rpl37aP61514 92 aa4.1□□□□□ -1.75
Ubr4-201ENSMUST00000097822 A930002H24RikQ8C8Y3 163 aa4.1□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Defb50Q6TU36 73 aa4.1□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Chchd10Q7TNL9 138 aa4.1□□□□□ -1.75
Ubr4-201ENSMUST00000097822 A330070K13RikQ8CA53 115 aa4.09□□□□□ -1.75
Ubr4-201ENSMUST00000097822 D730001G18RikA0A087WQU7 115 aa4.09□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Znf706Q9D115 76 aaKnown RBP4.09□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Sptbn4E9PX29 2561 aa4.09□□□□□ -1.75
Ubr4-201ENSMUST00000097822 Gm10837Q3UTT8 145 aa4.09□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Wfdc17Q5SSJ1 76 aa4.09□□□□□ -1.76
Ubr4-201ENSMUST00000097822 TrioQ0KL02 3102 aa4.08□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Col5a1O88207 1838 aa4.08□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Cep192E9Q4Y4 2514 aaKnown RBP4.08□□□□□ -1.76
Ubr4-201ENSMUST00000097822 SetxA2AKX3 2646 aa4.08□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Ighv8-13A0A075B5Y0 101 aa4.08□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Nbeal1E9PYP2 2688 aa4.07□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Gm10772F7AIG4 85 aa4.07□□□□□ -1.76
Ubr4-201ENSMUST00000097822 AplnQ9R0R4 77 aa4.06□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Dmac1Q9CQ00 111 aa4.06□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Bri3P28662 125 aa4.06□□□□□ -1.76
Ubr4-201ENSMUST00000097822 MtorQ9JLN9 2549 aa4.06□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Phxr5P08399 672 aa4.05□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Gm16485Q8C4B7 115 aa4.05□□□□□ -1.76
Ubr4-201ENSMUST00000097822 E130208F15RikQ3UPV3 143 aa4.05□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Gm17606F6ZL36 78 aa4.05□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Krtap26-1Q9D7N2 215 aa4.05□□□□□ -1.76
Retrieved 100 of 22,080 RNA–protein pairs in 67.4 ms