RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 4933414I15RikQ9D4D5 133 aa5.87□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Zfp462B1AWL2 2495 aaKnown RBP5.86□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Gm28285A0A087WQ54 102 aa5.86□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Igkv4-58A0A0G2JGI6 119 aa5.86□□□□□ -1.47
Upf3b-201ENSMUST00000076265 PolqQ8CGS6 2544 aa5.86□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Muc4Q8JZM8 3443 aa5.86□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Ins2P01326 110 aa5.86□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Txndc17Q9CQM5 123 aa5.86□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Ang3P97802 145 aa5.85□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Gm11110Q3U4K9 109 aa5.85□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Defb8Q91V82 60 aa5.85□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Hivep1Q03172 2688 aa5.85□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Wnk1P83741 2377 aa5.85□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Gm17509Q9CZ61 145 aa5.85□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Krtap27-1E9PX37 202 aa5.84□□□□□ -1.47
Upf3b-201ENSMUST00000076265 U90926O08546 118 aa5.84□□□□□ -1.47
Upf3b-201ENSMUST00000076265 LhbO09108 141 aa5.84□□□□□ -1.47
Upf3b-201ENSMUST00000076265 SycnQ8VCK7 134 aa5.84□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Higd2aQ9CQJ1 106 aa5.84□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Igkv12-89A0A0G2JGW8 112 aa5.83□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Gm20708H3BKF4 155 aa5.83□□□□□ -1.48
Upf3b-201ENSMUST00000076265 NdpP48744 131 aa5.83□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Smim6Q3U0I6 56 aa5.83□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Bsph1Q3UW26 133 aa5.83□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Gm27235Q3UW50 83 aa5.83□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Nav3Q80TN7 2359 aa5.83□□□□□ -1.48
Upf3b-201ENSMUST00000076265 A0A286YCN5 57 aa5.82□□□□□ -1.48
Upf3b-201ENSMUST00000076265 TifabQ8JZM6 147 aa5.82□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Gm10308Q9CVR5 141 aa5.82□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Ly6hQ9WUC3 139 aa5.82□□□□□ -1.48
Upf3b-201ENSMUST00000076265 BC067074F6RXI4 2391 aa5.81□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Rtl10D3YWW5 146 aa5.81□□□□□ -1.48
Upf3b-201ENSMUST00000076265 AcanQ61282 2132 aaKnown RBP5.81□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Col6a5A6H584 2640 aa5.8□□□□□ -1.48
Upf3b-201ENSMUST00000076265 FcgbpE9Q0B5 2583 aa5.8□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Gm3233E9Q2H5 230 aa5.8□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Ndufa1O35683 70 aa5.8□□□□□ -1.48
Upf3b-201ENSMUST00000076265 P01787 123 aa5.8□□□□□ -1.48
Upf3b-201ENSMUST00000076265 P01788 123 aa5.8□□□□□ -1.48
Upf3b-201ENSMUST00000076265 P01791 123 aa5.8□□□□□ -1.48
Upf3b-201ENSMUST00000076265 P01792 123 aa5.8□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Gm17660B9UIU9 90 aa5.8□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Gm10384Q3UQ87 92 aa5.8□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Atp23Q9CWQ3 201 aa5.8□□□□□ -1.48
Upf3b-201ENSMUST00000076265 2310034G01RikA0A286YDL3 209 aa5.79□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Gm10322F7D7I4 111 aa5.79□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Gm17455G3UW87 128 aa5.79□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Immp1lQ9CQU8 166 aa5.79□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Timm9Q9WV98 89 aaKnown RBP5.79□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Igkv2-109A0A075B5K6 120 aa5.79□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Spint5J3KMK8 105 aa5.79□□□□□ -1.48
Upf3b-201ENSMUST00000076265 A730071L15RikQ8C4X0 137 aa5.79□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Gm26992S4R1A3 76 aa5.79□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Usf3B2RUQ2 2221 aa5.79□□□□□ -1.48
Upf3b-201ENSMUST00000076265 Krtap31-2Q8CAY5 177 aa5.77□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Tex15F8VPN2 2785 aa5.77□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Igkv1-117A0A140T8M0 119 aa5.77□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Defb4P82019 63 aa5.76□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Gm10295Q8CCF3 114 aa5.76□□□□□ -1.49
Upf3b-201ENSMUST00000076265 P18528 98 aa5.76□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Defb26Q30KN7 186 aa5.76□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Camk2n1Q6QWF9 78 aa5.76□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Spink6Q8BT20 105 aa5.76□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Ormdl1Q921I0 153 aa5.76□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Igkv2-137A0A0B4J1H6 120 aa5.75□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Iglv3A0A0B4J1K5 122 aa5.75□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Stab1Q8R4Y4 2571 aa5.75□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Tmem190Q9D2E9 166 aa5.74□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Krtap31-1Q9D644 177 aa5.74□□□□□ -1.49
Upf3b-201ENSMUST00000076265 P01820 115 aa5.73□□□□□ -1.49
Upf3b-201ENSMUST00000076265 HilpdaQ9JLS0 64 aa5.73□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Gm17689B3GLJ4 109 aa5.72□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Defb47Q30KN1 79 aa5.72□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Wfdc17Q5SSJ1 76 aa5.71□□□□□ -1.49
Upf3b-201ENSMUST00000076265 Xirp2Q4U4S6 3784 aa5.71□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Gm7257D3YX25 99 aa5.71□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Defb7Q91V70 71 aa5.71□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Gm10521E9PZK0 135 aa5.7□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Serf2P84102 59 aa5.7□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Spink12Q9D256 87 aa5.7□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Igkv1-132A0A0B4J1H9 120 aa5.7□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Ear6Q923L7 155 aa5.7□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Megf8P60882 2789 aa5.7□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Gm1553Q66VB7 94 aa5.69□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Cox7b2Q9D2H1 82 aa5.69□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Nbeal2Q6ZQA0 2742 aa5.69□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Rnf5O35445 180 aa5.69□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Ear2P97425 156 aa5.69□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Gm10577Q3UDV9 132 aa5.69□□□□□ -1.5
Upf3b-201ENSMUST00000076265 P01794 123 aa5.68□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Vmo1Q5SXG7 201 aa5.68□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Gm27027S4R1M6 97 aa5.68□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Igkv4-78A0A0A6YYE5 119 aa5.68□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Igkv14-130A0A0G2JF45 117 aa5.68□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Ear3O35290 156 aa5.68□□□□□ -1.5
Upf3b-201ENSMUST00000076265 P01643 108 aa5.68□□□□□ -1.5
Upf3b-201ENSMUST00000076265 PigyP0C1P0 71 aa5.68□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Hmga2P52927 108 aa5.68□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Tmem14aP56983 99 aa5.68□□□□□ -1.5
Upf3b-201ENSMUST00000076265 Plac8Q9JI48 112 aa5.68□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 115.8 ms