RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Gm17606F6ZL36 78 aa7.9□□□□□ -1.14
Gtf3c1-201ENSMUST00000055506 Phxr5P08399 672 aa7.9□□□□□ -1.14
Gtf3c1-201ENSMUST00000055506 CnfnQ6PCW6 111 aa7.9□□□□□ -1.14
Gtf3c1-201ENSMUST00000055506 Chchd7Q8K2Q5 85 aa7.9□□□□□ -1.14
Gtf3c1-201ENSMUST00000055506 1700018G05RikA0A1B0GSI2 66 aa7.9□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 2310034G01RikA0A286YDL3 209 aa7.9□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 AI854703Q8BIN3 203 aa7.89□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Tns1E9Q0S6 1888 aaKnown RBP7.89□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Gm10999F6Q4M4 69 aa7.89□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 FshbQ60687 130 aa7.89□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Gm10160F6Y577 67 aa7.89□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 AvpP35455 168 aa7.88□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Defb50Q6TU36 73 aa7.87□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Gm20661K7N787 53 aa7.87□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Q9DAA7 145 aa7.87□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Gm17509Q9CZ61 145 aa7.87□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Gm9925F6T2U3 160 aa7.87□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Gm16485Q8C4B7 115 aa7.86□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Gm10549Q3URY4 149 aa7.86□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Pip4p1Q3TWL2 284 aa7.86□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Gm9922Q8C3P1 144 aa7.86□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Mp68P56379 58 aa7.85□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Zfand2aQ9JII7 171 aa7.84□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Rpl37aP61514 92 aa7.84□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Cox6a2P43023 97 aa7.84□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 A930009A15RikG3UYI6 118 aa7.84□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Bri3P28662 125 aa7.84□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Odf3l2Q3TZ65 277 aa7.84□□□□□ -1.15
Gtf3c1-201ENSMUST00000055506 Znf414Q9DCK4 299 aa7.83□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Gm44790A0A0N4SV91 103 aa7.83□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Ly6g6cQ9Z1Q4 126 aa7.83□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Pcsk5Q04592 1877 aa7.82□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 A930002H24RikQ8C8Y3 163 aa7.82□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Gm21886J3QJU9 214 aa7.81□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Igkv8-27A0A0G2JF28 120 aa7.81□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Cd164l2Q9D6W7 172 aa7.8□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Gm9767G3X930 207 aa7.8□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Msrb1Q9JLC3 116 aa7.8□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Gm3443F7CCV5 94 aa7.8□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Rps28P62858 69 aaKnown RBP7.79□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Krtap27-1E9PX37 202 aa7.79□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Prol1E9PYQ4 312 aa7.79□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Jbts17Q8CE72 3214 aa7.78□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Gm28374F6SG70 93 aa7.78□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Gm10642Q3TWM1 71 aa7.78□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Znf575Q3TXZ1 239 aa7.78□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Tln1P26039 2541 aaKnown RBP7.78□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Krtap16-1A2A5X5 502 aa7.78□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Col4a4Q9QZR9 1682 aa7.78□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Gm17689B3GLJ4 109 aa7.77□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 7530416G11RikJ3QJX6 159 aa7.77□□□□□ -1.16
Gtf3c1-201ENSMUST00000055506 Defb45Q3V490 66 aa7.77□□□□□ -1.17
Gtf3c1-201ENSMUST00000055506 B430305J03RikQ8BQQ8 176 aa7.77□□□□□ -1.17
Gtf3c1-201ENSMUST00000055506 BC025920Q3US60 128 aa7.76□□□□□ -1.17
Gtf3c1-201ENSMUST00000055506 Ighv2-5A0A0A6YY69 116 aa7.75□□□□□ -1.17
Gtf3c1-201ENSMUST00000055506 Defb2P82020 71 aa7.75□□□□□ -1.17
Gtf3c1-201ENSMUST00000055506 Defb10Q8R2I8 73 aa7.75□□□□□ -1.17
Gtf3c1-201ENSMUST00000055506 Dmbt1Q60997 2085 aa7.75□□□□□ -1.17
Gtf3c1-201ENSMUST00000055506 Ankhd1E9PUR0 2548 aaKnown RBP7.74□□□□□ -1.17
Gtf3c1-201ENSMUST00000055506 Gm5617Q91VN2 117 aa7.74□□□□□ -1.17
Gtf3c1-201ENSMUST00000055506 Sptbn4E9PX29 2561 aa7.73□□□□□ -1.17
Gtf3c1-201ENSMUST00000055506 Lrrk2Q5S006 2527 aa7.73□□□□□ -1.17
Gtf3c1-201ENSMUST00000055506 Gm10770F7D043 238 aa7.72□□□□□ -1.17
Gtf3c1-201ENSMUST00000055506 Ighv8-13A0A075B5Y0 101 aa7.71□□□□□ -1.17
Gtf3c1-201ENSMUST00000055506 3110070M22RikQ9DAQ7 118 aa7.71□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 CrygaP04345 174 aa7.71□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 RetnlbQ99P86 105 aa7.7□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 Rnase13Q5GAM7 153 aa7.7□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 Coa5Q99M07 74 aa7.7□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 AI606181Q8C7B9 129 aa7.69□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 Pla2g2cP48076 150 aa7.68□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 Spaca4Q80ZQ0 127 aa7.67□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 Cdc42se1Q8BHL7 80 aa7.67□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 Limd2Q8BGB5 128 aa7.67□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 Q9DAB9 146 aa7.67□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 UtrnE9Q6R7 3430 aa7.66□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 Q8BGJ3 129 aa7.66□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 Phf5aP83870 110 aaKnown RBP7.65□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 Smr3aQ61900 147 aa7.65□□□□□ -1.18
Gtf3c1-201ENSMUST00000055506 Prr9Q8BV84 116 aa7.65□□□□□ -1.19
Gtf3c1-201ENSMUST00000055506 Gm3285A0A1W2P7U0 201 aa7.64□□□□□ -1.19
Gtf3c1-201ENSMUST00000055506 Setd2E9Q5F9 2537 aa7.63□□□□□ -1.19
Gtf3c1-201ENSMUST00000055506 Elof1P60003 83 aa7.61□□□□□ -1.19
Gtf3c1-201ENSMUST00000055506 Eif4ebp3Q80VV3 101 aa7.6□□□□□ -1.19
Gtf3c1-201ENSMUST00000055506 Gpr15lA0A0B4J1N3 78 aa7.6□□□□□ -1.19
Gtf3c1-201ENSMUST00000055506 Gm11213A0A1B0GR83 88 aa7.59□□□□□ -1.19
Gtf3c1-201ENSMUST00000055506 Gm3250E9Q1M3 230 aa7.59□□□□□ -1.19
Gtf3c1-201ENSMUST00000055506 Dmac1Q9CQ00 111 aa7.59□□□□□ -1.19
Gtf3c1-201ENSMUST00000055506 Ighv2-2A0A075B5P8 116 aa7.59□□□□□ -1.19
Gtf3c1-201ENSMUST00000055506 P01821 116 aa7.59□□□□□ -1.19
Gtf3c1-201ENSMUST00000055506 Fam168bQ80XQ8 194 aa7.58□□□□□ -1.2
Gtf3c1-201ENSMUST00000055506 Q8BT88 171 aa7.58□□□□□ -1.2
Gtf3c1-201ENSMUST00000055506 Usp9xP70398 2559 aaKnown RBP7.58□□□□□ -1.2
Gtf3c1-201ENSMUST00000055506 Gm10308Q9CVR5 141 aa7.58□□□□□ -1.2
Gtf3c1-201ENSMUST00000055506 4930507D05RikQ8C9C9 103 aa7.58□□□□□ -1.2
Gtf3c1-201ENSMUST00000055506 Gm5464Q3UY29 175 aa7.57□□□□□ -1.2
Gtf3c1-201ENSMUST00000055506 Zfp462B1AWL2 2495 aaKnown RBP7.57□□□□□ -1.2
Gtf3c1-201ENSMUST00000055506 Gm9903Q8C9Y8 129 aa7.57□□□□□ -1.2
Gtf3c1-201ENSMUST00000055506 MobpQ9D2P8 170 aa7.56□□□□□ -1.2
Gtf3c1-201ENSMUST00000055506 Ep400Q8CHI8 3072 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 117 ms