RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Igkv1-35A0A0G2JDE5 120 aa15.27■□□□□ 0.03
Ptx3-201ENSMUST00000029421 Igkv1-99F6XWB2 120 aa15.27■□□□□ 0.03
Ptx3-201ENSMUST00000029421 Tcl1b5P56845 121 aa15.26■□□□□ 0.03
Ptx3-201ENSMUST00000029421 Apoc4Q61268 124 aa15.25■□□□□ 0.03
Ptx3-201ENSMUST00000029421 Csdc2Q91YQ3 154 aa15.25■□□□□ 0.03
Ptx3-201ENSMUST00000029421 Higd2aQ9CQJ1 106 aa15.25■□□□□ 0.03
Ptx3-201ENSMUST00000029421 PolqQ8CGS6 2544 aa15.25■□□□□ 0.03
Ptx3-201ENSMUST00000029421 P01819 144 aa15.24■□□□□ 0.03
Ptx3-201ENSMUST00000029421 Prp2P05143 317 aa15.24■□□□□ 0.03
Ptx3-201ENSMUST00000029421 Defa1P11477 93 aa15.24■□□□□ 0.03
Ptx3-201ENSMUST00000029421 B230359F08RikA0A0B4J1K3 109 aa15.23■□□□□ 0.03
Ptx3-201ENSMUST00000029421 Gm7137J3QMW1 236 aa15.23■□□□□ 0.03
Ptx3-201ENSMUST00000029421 Igf1P05017 153 aa15.23■□□□□ 0.03
Ptx3-201ENSMUST00000029421 Hist1h4aP62806 103 aaKnown RBP15.23■□□□□ 0.03
Ptx3-201ENSMUST00000029421 Gm5142Q8C5X9 133 aa15.22■□□□□ 0.03
Ptx3-201ENSMUST00000029421 Igkv4-53A0A0G2JFC6 119 aa15.21■□□□□ 0.03
Ptx3-201ENSMUST00000029421 Tmem86bQ497J1 226 aa15.2■□□□□ 0.02
Ptx3-201ENSMUST00000029421 Igkv8-18A0A0B4J1J3 123 aa15.2■□□□□ 0.02
Ptx3-201ENSMUST00000029421 Inafm2A0A1L1STD6 152 aa15.2■□□□□ 0.02
Ptx3-201ENSMUST00000029421 1810062G17RikG3X8Y2 129 aa15.19■□□□□ 0.02
Ptx3-201ENSMUST00000029421 4930519P11RikQ9CUJ8 166 aa15.19■□□□□ 0.02
Ptx3-201ENSMUST00000029421 6430550D23RikE9Q1X6 194 aa15.18■□□□□ 0.02
Ptx3-201ENSMUST00000029421 Defa25Q5G864 92 aa15.18■□□□□ 0.02
Ptx3-201ENSMUST00000029421 PrcdQ00LT2 53 aa15.18■□□□□ 0.02
Ptx3-201ENSMUST00000029421 Ifitm6A0A1B0GS75 124 aa15.17■□□□□ 0.02
Ptx3-201ENSMUST00000029421 Gm10845Q3UNY9 185 aa15.17■□□□□ 0.02
Ptx3-201ENSMUST00000029421 Gm5153P01627 120 aa15.16■□□□□ 0.02
Ptx3-201ENSMUST00000029421 Defa16P50714 93 aa15.16■□□□□ 0.02
Ptx3-201ENSMUST00000029421 Kmt2aP55200 3966 aa15.16■□□□□ 0.02
Ptx3-201ENSMUST00000029421 PtprqP0C5E4 2300 aa15.15■□□□□ 0.02
Ptx3-201ENSMUST00000029421 Gm9903Q8C9Y8 129 aa15.14■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Bles03Q8VD62 251 aa15.14■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Ighv2-9A0A075B5Q5 116 aa15.14■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Igkv6-13A0A0G2JGY3 119 aa15.14■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Tmem254aP0DN89 123 aa15.14■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Tmem254bP0DN90 123 aa15.14■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Tmem254cP0DN91 123 aa15.14■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Rpl18aP62717 176 aaKnown RBP15.14■□□□□ 0.01
Ptx3-201ENSMUST00000029421 4930556J24RikQ9D4U7 146 aa15.14■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Igkv3-9A0A140T8P4 119 aa15.12■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Rpl39lQ9CQD0 51 aa15.12■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Trav13-1A0A075B644 110 aa15.12■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Ighv8-11A0A075B5X4 119 aa15.11■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Trbv13-2A0A140T8N6 113 aa15.11■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Trav13n-2A0A0G2JF93 110 aa15.1■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Cox7bP56393 80 aa15.1■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Ighv10-3A0A075B5T6 119 aa15.1■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Gm7102J3QQ10 178 aa15.09■□□□□ 0.01
Ptx3-201ENSMUST00000029421 CnbpP53996 178 aaKnown RBP15.09■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Trav9n-4A0A075B631 113 aa15.08■□□□□ 0.01
Ptx3-201ENSMUST00000029421 Ormdl1Q921I0 153 aa15.04■□□□□ -0
Ptx3-201ENSMUST00000029421 Gm10308Q9CVR5 141 aa15.04■□□□□ -0
Ptx3-201ENSMUST00000029421 Ighv10-1A0A0B4J1J6 119 aa15.03■□□□□ -0
Ptx3-201ENSMUST00000029421 Serp2Q6TAW2 65 aa15.03■□□□□ -0
Ptx3-201ENSMUST00000029421 Ighv8-13A0A075B5Y0 101 aa15.03■□□□□ -0
Ptx3-201ENSMUST00000029421 Defa2P28309 93 aa15.03■□□□□ -0
Ptx3-201ENSMUST00000029421 C530025M09RikF6RGA8 229 aa15.02■□□□□ -0
Ptx3-201ENSMUST00000029421 Q9DAA7 145 aa15.02■□□□□ -0
Ptx3-201ENSMUST00000029421 7530416G11RikJ3QJX6 159 aa15.01□□□□□ -0.01
Ptx3-201ENSMUST00000029421 Dnah6E9Q0B6 4144 aa15□□□□□ -0.01
Ptx3-201ENSMUST00000029421 Igsf10Q3V1M1 2594 aa15□□□□□ -0.01
Ptx3-201ENSMUST00000029421 Mrpl52Q9D0Y8 121 aa15□□□□□ -0.01
Ptx3-201ENSMUST00000029421 Ighv2-5A0A0A6YY69 116 aa14.99□□□□□ -0.01
Ptx3-201ENSMUST00000029421 Ube2d4D3YUH6 135 aa14.99□□□□□ -0.01
Ptx3-201ENSMUST00000029421 Ubl5Q9EPV8 73 aa14.99□□□□□ -0.01
Ptx3-201ENSMUST00000029421 Igkv8-26A0A075B5N5 123 aa14.98□□□□□ -0.01
Ptx3-201ENSMUST00000029421 D130052B06RikQ3UW13 202 aa14.98□□□□□ -0.01
Ptx3-201ENSMUST00000029421 Notch1Q01705 2531 aa14.97□□□□□ -0.01
Ptx3-201ENSMUST00000029421 Gm10518F6UQQ9 182 aa14.97□□□□□ -0.01
Ptx3-201ENSMUST00000029421 Trav13-2A0A075B649 110 aa14.96□□□□□ -0.01
Ptx3-201ENSMUST00000029421 VwfQ8CIZ8 2813 aa14.96□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Pde6gP09174 87 aa14.95□□□□□ -0.02
Ptx3-201ENSMUST00000029421 ScxQ64124 207 aa14.95□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Igkv8-24A0A140T8P5 121 aa14.95□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Igkv8-16A0A0G2JDG9 121 aa14.94□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Gm9805F6YK59 57 aa14.93□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Reg3dQ9QUS9 175 aa14.93□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Dnah10D3YYQ8 4591 aa14.93□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Igkv2-109A0A075B5K6 120 aa14.93□□□□□ -0.02
Ptx3-201ENSMUST00000029421 MifP34884 115 aaKnown RBP14.93□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Tmem258P61166 79 aa14.93□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Rps28P62858 69 aaKnown RBP14.93□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Dnah3Q8BW94 4083 aa14.92□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Gm16181B0V2H2 73 aa14.92□□□□□ -0.02
Ptx3-201ENSMUST00000029421 GhrhP16043 103 aa14.92□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Klk12B2RVZ0 247 aa14.91□□□□□ -0.02
Ptx3-201ENSMUST00000029421 TnxbO35452 4006 aa14.91□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Igkv8-34A0A0G2JDU0 121 aa14.91□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Gm10770F7D043 238 aa14.91□□□□□ -0.02
Ptx3-201ENSMUST00000029421 Gm19935A0A1B0GSF9 52 aa14.89□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Igkv8-21A0A140T8P7 120 aa14.89□□□□□ -0.03
Ptx3-201ENSMUST00000029421 2010109I03RikQ9CQ11 111 aa14.89□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Igkv8-27A0A0G2JF28 120 aa14.88□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Igkv8-30A0A140T8M3 121 aa14.88□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Sslp1Q3UN54 99 aa14.88□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Ndufc1Q9CQY9 76 aa14.88□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Gm3618D3Z4P5 127 aa14.87□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Snhg11Q4G0K9 87 aa14.87□□□□□ -0.03
Ptx3-201ENSMUST00000029421 Gm2916Q9D9B9 127 aa14.87□□□□□ -0.03
Ptx3-201ENSMUST00000029421 E130208F15RikQ3UPV3 143 aa14.86□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 110.5 ms