RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Trav13-1A0A075B644 110 aa7.91□□□□□ -1.14
Trim55-201ENSMUST00000029139 6430550D23RikE9Q1X6 194 aa7.91□□□□□ -1.14
Trim55-201ENSMUST00000029139 Gm19345G3UYD9 124 aa7.91□□□□□ -1.14
Trim55-201ENSMUST00000029139 Tcl1b3P56842 122 aa7.91□□□□□ -1.14
Trim55-201ENSMUST00000029139 Igkv4-69A0A0B4J1I6 116 aa7.9□□□□□ -1.14
Trim55-201ENSMUST00000029139 B230359F08RikA0A0B4J1K3 109 aa7.9□□□□□ -1.14
Trim55-201ENSMUST00000029139 Gm10518F6UQQ9 182 aa7.9□□□□□ -1.14
Trim55-201ENSMUST00000029139 Spink4O35679 86 aa7.9□□□□□ -1.14
Trim55-201ENSMUST00000029139 A730071L15RikQ8C4X0 137 aa7.9□□□□□ -1.14
Trim55-201ENSMUST00000029139 Igkv8-24A0A140T8P5 121 aa7.9□□□□□ -1.15
Trim55-201ENSMUST00000029139 2310034C09RikQ9D746 214 aa7.9□□□□□ -1.15
Trim55-201ENSMUST00000029139 Col6a4A2AX52 2309 aa7.89□□□□□ -1.15
Trim55-201ENSMUST00000029139 Igkv4-57A0A0A6YYE7 117 aa7.89□□□□□ -1.15
Trim55-201ENSMUST00000029139 9530003J23RikQ8BM26 151 aa7.89□□□□□ -1.15
Trim55-201ENSMUST00000029139 Smim29Q8R043 75 aa7.89□□□□□ -1.15
Trim55-201ENSMUST00000029139 Sptbn2Q68FG2 2388 aa7.89□□□□□ -1.15
Trim55-201ENSMUST00000029139 Gm10490F6VBM2 120 aa7.88□□□□□ -1.15
Trim55-201ENSMUST00000029139 Clpsl2Q3UW21 102 aa7.88□□□□□ -1.15
Trim55-201ENSMUST00000029139 Cdc42se2Q8BGH7 84 aa7.88□□□□□ -1.15
Trim55-201ENSMUST00000029139 Zfand2aQ9JII7 171 aa7.88□□□□□ -1.15
Trim55-201ENSMUST00000029139 Prrc2cQ3TLH4 2846 aaKnown RBP7.88□□□□□ -1.15
Trim55-201ENSMUST00000029139 C2cd3Q52KB6 2323 aa7.88□□□□□ -1.15
Trim55-201ENSMUST00000029139 TrrapQ80YV3 2565 aaKnown RBP7.87□□□□□ -1.15
Trim55-201ENSMUST00000029139 Zfhx4Q9JJN2 3550 aa7.87□□□□□ -1.15
Trim55-201ENSMUST00000029139 Zzef1Q5SSH7 2924 aa7.87□□□□□ -1.15
Trim55-201ENSMUST00000029139 Gm9513B3GLJ6 99 aa7.86□□□□□ -1.15
Trim55-201ENSMUST00000029139 Lynx1P0DP60 116 aa7.86□□□□□ -1.15
Trim55-201ENSMUST00000029139 Ros1Q78DX7 2340 aa7.86□□□□□ -1.15
Trim55-201ENSMUST00000029139 Lama1P19137 3084 aa7.86□□□□□ -1.15
Trim55-201ENSMUST00000029139 Gm10320E9PW43 113 aa7.85□□□□□ -1.15
Trim55-201ENSMUST00000029139 SptssbQ925E8 76 aa7.85□□□□□ -1.15
Trim55-201ENSMUST00000029139 Cacna1bO55017 2327 aa7.85□□□□□ -1.15
Trim55-201ENSMUST00000029139 Igkv8-19A0A0G2JFN8 121 aa7.85□□□□□ -1.15
Trim55-201ENSMUST00000029139 Igkv3-1A0A075B5P1 119 aa7.84□□□□□ -1.15
Trim55-201ENSMUST00000029139 Gm12216A0A1W2P827 62 aa7.84□□□□□ -1.15
Trim55-201ENSMUST00000029139 Gm7137J3QMW1 236 aa7.84□□□□□ -1.15
Trim55-201ENSMUST00000029139 MobpQ9D2P8 170 aa7.84□□□□□ -1.15
Trim55-201ENSMUST00000029139 Igkv4-58A0A0G2JGI6 119 aa7.83□□□□□ -1.16
Trim55-201ENSMUST00000029139 Gm11565A2A4M7 156 aa7.83□□□□□ -1.16
Trim55-201ENSMUST00000029139 Cypt14J3QPF7 87 aa7.83□□□□□ -1.16
Trim55-201ENSMUST00000029139 Elof1P60003 83 aa7.83□□□□□ -1.16
Trim55-201ENSMUST00000029139 B9d2Q3UK10 175 aa7.83□□□□□ -1.16
Trim55-201ENSMUST00000029139 Rif1Q6PR54 2419 aaKnown RBP7.83□□□□□ -1.16
Trim55-201ENSMUST00000029139 Gm9970F6ZED4 185 aa7.82□□□□□ -1.16
Trim55-201ENSMUST00000029139 Plac8l1Q08EJ0 177 aa7.82□□□□□ -1.16
Trim55-201ENSMUST00000029139 Krtap26-1Q9D7N2 215 aa7.82□□□□□ -1.16
Trim55-201ENSMUST00000029139 Muc2Q80Z19 2680 aa7.82□□□□□ -1.16
Trim55-201ENSMUST00000029139 Dmxl2Q8BPN8 3032 aa7.82□□□□□ -1.16
Trim55-201ENSMUST00000029139 Igkv8-28A0A0G2JE47 121 aa7.81□□□□□ -1.16
Trim55-201ENSMUST00000029139 Pla2g2dQ9WVF6 144 aa7.81□□□□□ -1.16
Trim55-201ENSMUST00000029139 Sfta2E9PXB6 77 aa7.81□□□□□ -1.16
Trim55-201ENSMUST00000029139 Muc5acE9QAQ8 3455 aa7.81□□□□□ -1.16
Trim55-201ENSMUST00000029139 AcacaQ5SWU9 2345 aa7.8□□□□□ -1.16
Trim55-201ENSMUST00000029139 Spint3Q3UW09 88 aa7.8□□□□□ -1.16
Trim55-201ENSMUST00000029139 Fbn2Q61555 2907 aa7.8□□□□□ -1.16
Trim55-201ENSMUST00000029139 Defb2P82020 71 aa7.79□□□□□ -1.16
Trim55-201ENSMUST00000029139 Cep192E9Q4Y4 2514 aaKnown RBP7.79□□□□□ -1.16
Trim55-201ENSMUST00000029139 Prp2P05143 317 aa7.78□□□□□ -1.16
Trim55-201ENSMUST00000029139 A330070K13RikQ8CA53 115 aa7.78□□□□□ -1.16
Trim55-201ENSMUST00000029139 Armcx4E9PWM3 2356 aa7.78□□□□□ -1.16
Trim55-201ENSMUST00000029139 Igkv1-88A0A140T8N1 120 aa7.77□□□□□ -1.16
Trim55-201ENSMUST00000029139 Gm16485Q8C4B7 115 aa7.77□□□□□ -1.16
Trim55-201ENSMUST00000029139 9130230L23RikQ8CC80 163 aa7.77□□□□□ -1.16
Trim55-201ENSMUST00000029139 Ighv2-7A0A075B5Q8 116 aa7.77□□□□□ -1.17
Trim55-201ENSMUST00000029139 Lmo4P61969 165 aa7.76□□□□□ -1.17
Trim55-201ENSMUST00000029139 Defb30Q30KN4 75 aa7.76□□□□□ -1.17
Trim55-201ENSMUST00000029139 Defb10Q8R2I8 73 aa7.76□□□□□ -1.17
Trim55-201ENSMUST00000029139 Igkv4-68A0A0B4J1I7 117 aa7.76□□□□□ -1.17
Trim55-201ENSMUST00000029139 Cypt15B1AXS0 87 aa7.76□□□□□ -1.17
Trim55-201ENSMUST00000029139 Sprr2jO70561 109 aa7.76□□□□□ -1.17
Trim55-201ENSMUST00000029139 Spink1P09036 80 aa7.76□□□□□ -1.17
Trim55-201ENSMUST00000029139 Cox7b2Q9D2H1 82 aa7.76□□□□□ -1.17
Trim55-201ENSMUST00000029139 Gm9805F6YK59 57 aa7.75□□□□□ -1.17
Trim55-201ENSMUST00000029139 Ndufb1P0DN34 57 aa7.75□□□□□ -1.17
Trim55-201ENSMUST00000029139 Gm10553J3QPF1 123 aa7.74□□□□□ -1.17
Trim55-201ENSMUST00000029139 3110018I06RikQ9CXS0 120 aa7.74□□□□□ -1.17
Trim55-201ENSMUST00000029139 Med13lQ6JPI3 2207 aa7.74□□□□□ -1.17
Trim55-201ENSMUST00000029139 Cox7bP56393 80 aa7.73□□□□□ -1.17
Trim55-201ENSMUST00000029139 Map1aQ9QYR6 2776 aa7.73□□□□□ -1.17
Trim55-201ENSMUST00000029139 Gm44790A0A0N4SV91 103 aa7.73□□□□□ -1.17
Trim55-201ENSMUST00000029139 A0A286YCN5 57 aa7.73□□□□□ -1.17
Trim55-201ENSMUST00000029139 Msrb1Q9JLC3 116 aa7.73□□□□□ -1.17
Trim55-201ENSMUST00000029139 RelnQ60841 3461 aa7.73□□□□□ -1.17
Trim55-201ENSMUST00000029139 Gm20538F6Z9R1 75 aa7.72□□□□□ -1.17
Trim55-201ENSMUST00000029139 Defb33Q30KN3 62 aa7.72□□□□□ -1.17
Trim55-201ENSMUST00000029139 DspE9Q557 2883 aaKnown RBP7.72□□□□□ -1.17
Trim55-201ENSMUST00000029139 Ccl21aP84444 133 aa7.72□□□□□ -1.17
Trim55-201ENSMUST00000029139 Ccl21bP86792 133 aa7.72□□□□□ -1.17
Trim55-201ENSMUST00000029139 Ccl21cP86793 133 aa7.72□□□□□ -1.17
Trim55-201ENSMUST00000029139 Cep250Q60952 2414 aa7.72□□□□□ -1.17
Trim55-201ENSMUST00000029139 Wfdc6bF6ULY1 148 aa7.71□□□□□ -1.18
Trim55-201ENSMUST00000029139 Ndufs5Q99LY9 106 aa7.71□□□□□ -1.18
Trim55-201ENSMUST00000029139 Sptan1P16546 2472 aaKnown RBP7.71□□□□□ -1.18
Trim55-201ENSMUST00000029139 Defb18Q30KP5 85 aa7.7□□□□□ -1.18
Trim55-201ENSMUST00000029139 FshbQ60687 130 aa7.69□□□□□ -1.18
Trim55-201ENSMUST00000029139 Vps13cQ8BX70 3748 aa7.69□□□□□ -1.18
Trim55-201ENSMUST00000029139 Spink6Q8BT20 105 aa7.69□□□□□ -1.18
Trim55-201ENSMUST00000029139 Obox2E9PXV9 151 aa7.68□□□□□ -1.18
Trim55-201ENSMUST00000029139 Setd2E9Q5F9 2537 aa7.68□□□□□ -1.18
Trim55-201ENSMUST00000029139 Igkv3-2A0A075B5P0 119 aa7.67□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 88.1 ms