RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 P06329 120 aa15.54■□□□□ 0.08
Sox1-201ENSMUST00000180353 Cd164l2Q9D6W7 172 aa15.54■□□□□ 0.08
Sox1-201ENSMUST00000180353 Ppp1r32Q148A4 427 aa15.53■□□□□ 0.08
Sox1-201ENSMUST00000180353 3110070M22RikQ9DAQ7 118 aa15.53■□□□□ 0.08
Sox1-201ENSMUST00000180353 Ighv10-3A0A075B5T6 119 aa15.53■□□□□ 0.08
Sox1-201ENSMUST00000180353 Krtap27-1E9PX37 202 aa15.53■□□□□ 0.08
Sox1-201ENSMUST00000180353 B230217C12RikE9Q3Z1 139 aa15.53■□□□□ 0.08
Sox1-201ENSMUST00000180353 Fam110dQ80X91 271 aa15.52■□□□□ 0.08
Sox1-201ENSMUST00000180353 A830005F24RikQ8BRT5 167 aa15.52■□□□□ 0.08
Sox1-201ENSMUST00000180353 Ccl21aP84444 133 aa15.52■□□□□ 0.08
Sox1-201ENSMUST00000180353 Ccl21bP86792 133 aa15.52■□□□□ 0.08
Sox1-201ENSMUST00000180353 Ccl21cP86793 133 aa15.52■□□□□ 0.08
Sox1-201ENSMUST00000180353 4930564D02RikQ9D4S4 103 aa15.51■□□□□ 0.07
Sox1-201ENSMUST00000180353 Sptbn4E9PX29 2561 aa15.51■□□□□ 0.07
Sox1-201ENSMUST00000180353 Ighv1-59A0A0A6YXE0 117 aa15.51■□□□□ 0.07
Sox1-201ENSMUST00000180353 P01745 121 aa15.51■□□□□ 0.07
Sox1-201ENSMUST00000180353 4930556J24RikQ9D4U7 146 aa15.5■□□□□ 0.07
Sox1-201ENSMUST00000180353 Ighv1-56A0A0A6YXG2 117 aa15.5■□□□□ 0.07
Sox1-201ENSMUST00000180353 Psmb11Q8BG41 302 aa15.49■□□□□ 0.07
Sox1-201ENSMUST00000180353 Shisa2Q8QZV2 295 aa15.48■□□□□ 0.07
Sox1-201ENSMUST00000180353 Fgf23Q9EPC2 251 aa15.48■□□□□ 0.07
Sox1-201ENSMUST00000180353 Cox7bP56393 80 aa15.47■□□□□ 0.07
Sox1-201ENSMUST00000180353 Chd8Q09XV5 2582 aaKnown RBP15.46■□□□□ 0.07
Sox1-201ENSMUST00000180353 Gm10197F6QEY5 67 aa15.46■□□□□ 0.07
Sox1-201ENSMUST00000180353 Col4a4Q9QZR9 1682 aa15.46■□□□□ 0.07
Sox1-201ENSMUST00000180353 Gm9573F7C950 1606 aa15.46■□□□□ 0.06
Sox1-201ENSMUST00000180353 Ankhd1E9PUR0 2548 aaKnown RBP15.46■□□□□ 0.06
Sox1-201ENSMUST00000180353 NrgnP60761 78 aa15.45■□□□□ 0.06
Sox1-201ENSMUST00000180353 Igkv4-92A0A0B4J1I2 117 aa15.45■□□□□ 0.06
Sox1-201ENSMUST00000180353 Znf580Q9DB38 172 aa15.45■□□□□ 0.06
Sox1-201ENSMUST00000180353 Gm26661M0QWV4 156 aa15.45■□□□□ 0.06
Sox1-201ENSMUST00000180353 P01819 144 aa15.44■□□□□ 0.06
Sox1-201ENSMUST00000180353 Lce6aD3YV94 81 aa15.43■□□□□ 0.06
Sox1-201ENSMUST00000180353 Pla2g2aP31482 146 aa15.43■□□□□ 0.06
Sox1-201ENSMUST00000180353 Igkv1-117A0A140T8M0 119 aa15.42■□□□□ 0.06
Sox1-201ENSMUST00000180353 Gm9913Q8BQQ2 135 aa15.42■□□□□ 0.06
Sox1-201ENSMUST00000180353 Defb18Q30KP5 85 aa15.41■□□□□ 0.06
Sox1-201ENSMUST00000180353 Coa6Q8BGD8 79 aa15.41■□□□□ 0.06
Sox1-201ENSMUST00000180353 Gm9887F6RFI0 207 aa15.4■□□□□ 0.06
Sox1-201ENSMUST00000180353 Pkd1l2Q7TN88 2461 aa15.4■□□□□ 0.06
Sox1-201ENSMUST00000180353 Wfdc12Q9JHY3 85 aa15.4■□□□□ 0.06
Sox1-201ENSMUST00000180353 TrioQ0KL02 3102 aa15.39■□□□□ 0.05
Sox1-201ENSMUST00000180353 Gm10226O88253 85 aa15.39■□□□□ 0.05
Sox1-201ENSMUST00000180353 Gm9925F6T2U3 160 aa15.38■□□□□ 0.05
Sox1-201ENSMUST00000180353 A0A286YE49 62 aa15.38■□□□□ 0.05
Sox1-201ENSMUST00000180353 Defb40Q70KL2 73 aa15.37■□□□□ 0.05
Sox1-201ENSMUST00000180353 Higd2aQ9CQJ1 106 aa15.37■□□□□ 0.05
Sox1-201ENSMUST00000180353 Sprr2jO70561 109 aa15.37■□□□□ 0.05
Sox1-201ENSMUST00000180353 Abca2P41234 2434 aa15.37■□□□□ 0.05
Sox1-201ENSMUST00000180353 Plac8l1Q08EJ0 177 aa15.36■□□□□ 0.05
Sox1-201ENSMUST00000180353 Pip4p1Q3TWL2 284 aa15.36■□□□□ 0.05
Sox1-201ENSMUST00000180353 BC067074F6RXI4 2391 aa15.35■□□□□ 0.05
Sox1-201ENSMUST00000180353 Fhl2O70433 279 aa15.35■□□□□ 0.05
Sox1-201ENSMUST00000180353 Erdr1J3QMM0 206 aa15.34■□□□□ 0.05
Sox1-201ENSMUST00000180353 Fam19a3Q7TPG6 132 aa15.34■□□□□ 0.05
Sox1-201ENSMUST00000180353 Sslp1Q3UN54 99 aa15.34■□□□□ 0.05
Sox1-201ENSMUST00000180353 Sostdc1Q9CQN4 206 aa15.34■□□□□ 0.05
Sox1-201ENSMUST00000180353 Ighv2-5A0A0A6YY69 116 aa15.34■□□□□ 0.05
Sox1-201ENSMUST00000180353 Rnase1P00683 149 aa15.33■□□□□ 0.05
Sox1-201ENSMUST00000180353 Tcl1b5P56845 121 aa15.33■□□□□ 0.04
Sox1-201ENSMUST00000180353 Chchd7Q8K2Q5 85 aa15.33■□□□□ 0.04
Sox1-201ENSMUST00000180353 Ifitm6A0A1B0GS75 124 aa15.32■□□□□ 0.04
Sox1-201ENSMUST00000180353 Esm1Q9QYY7 184 aa15.32■□□□□ 0.04
Sox1-201ENSMUST00000180353 Col27a1Q5QNQ9 1845 aa15.31■□□□□ 0.04
Sox1-201ENSMUST00000180353 C2cd3Q52KB6 2323 aa15.31■□□□□ 0.04
Sox1-201ENSMUST00000180353 Gm20604F8WIA3 75 aa15.31■□□□□ 0.04
Sox1-201ENSMUST00000180353 B9d2Q3UK10 175 aa15.3■□□□□ 0.04
Sox1-201ENSMUST00000180353 CenpfE9Q3P4 2997 aaKnown RBP15.3■□□□□ 0.04
Sox1-201ENSMUST00000180353 SetxA2AKX3 2646 aa15.3■□□□□ 0.04
Sox1-201ENSMUST00000180353 Igkv1-110A0A0B4J1I0 119 aa15.3■□□□□ 0.04
Sox1-201ENSMUST00000180353 PlaurP35456 327 aa15.3■□□□□ 0.04
Sox1-201ENSMUST00000180353 Znf575Q3TXZ1 239 aa15.29■□□□□ 0.04
Sox1-201ENSMUST00000180353 Zfand2aQ9JII7 171 aa15.28■□□□□ 0.04
Sox1-201ENSMUST00000180353 Usp9xP70398 2559 aaKnown RBP15.27■□□□□ 0.04
Sox1-201ENSMUST00000180353 Myo9aQ8C170 2542 aa15.27■□□□□ 0.03
Sox1-201ENSMUST00000180353 E130114P18RikF6S0S7 154 aa15.27■□□□□ 0.03
Sox1-201ENSMUST00000180353 Q9DAA7 145 aa15.26■□□□□ 0.03
Sox1-201ENSMUST00000180353 Nav3Q80TN7 2359 aa15.26■□□□□ 0.03
Sox1-201ENSMUST00000180353 Odf3l2Q3TZ65 277 aa15.25■□□□□ 0.03
Sox1-201ENSMUST00000180353 Bean1Q9EQG5 255 aa15.24■□□□□ 0.03
Sox1-201ENSMUST00000180353 2310034G01RikA0A286YDL3 209 aa15.24■□□□□ 0.03
Sox1-201ENSMUST00000180353 A0A286YCN5 57 aa15.23■□□□□ 0.03
Sox1-201ENSMUST00000180353 Reg3bP35230 175 aa15.23■□□□□ 0.03
Sox1-201ENSMUST00000180353 PrlhG3UWC3 86 aa15.23■□□□□ 0.03
Sox1-201ENSMUST00000180353 Col5a1O88207 1838 aa15.23■□□□□ 0.03
Sox1-201ENSMUST00000180353 Gm10308Q9CVR5 141 aa15.23■□□□□ 0.03
Sox1-201ENSMUST00000180353 1700074P13RikQ9D9G7 251 aa15.23■□□□□ 0.03
Sox1-201ENSMUST00000180353 Pla2g2cP48076 150 aa15.22■□□□□ 0.03
Sox1-201ENSMUST00000180353 Ighv2-2A0A075B5P8 116 aa15.2■□□□□ 0.02
Sox1-201ENSMUST00000180353 P01821 116 aa15.2■□□□□ 0.02
Sox1-201ENSMUST00000180353 Gm9922Q8C3P1 144 aa15.18■□□□□ 0.02
Sox1-201ENSMUST00000180353 Ighv2-9-1A0A075B697 116 aa15.18■□□□□ 0.02
Sox1-201ENSMUST00000180353 Igkv8-27A0A0G2JF28 120 aa15.17■□□□□ 0.02
Sox1-201ENSMUST00000180353 Igkv8-30A0A140T8M3 121 aa15.17■□□□□ 0.02
Sox1-201ENSMUST00000180353 Igkv3-5A0A140T8M6 119 aa15.16■□□□□ 0.02
Sox1-201ENSMUST00000180353 Eif4ebp3Q80VV3 101 aa15.15■□□□□ 0.02
Sox1-201ENSMUST00000180353 Defb42Q8BVB5 75 aa15.15■□□□□ 0.02
Sox1-201ENSMUST00000180353 Gm11213A0A1B0GR83 88 aa15.14■□□□□ 0.01
Sox1-201ENSMUST00000180353 Cdc42se1Q8BHL7 80 aa15.13■□□□□ 0.01
Sox1-201ENSMUST00000180353 4930519P11RikQ9CUJ8 166 aa15.11■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 71.9 ms