RNA–Protein interactions for RNA: ENSMUST00000112070.7

Col7a1-202, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col7a1, Length 9,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-202ENSMUST00000112070 C130032M10RikQ8C888 123 aa10.51□□□□□ -0.73
Col7a1-202ENSMUST00000112070 TrrapQ80YV3 2565 aaKnown RBP10.51□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Igkv8-19A0A0G2JFN8 121 aa10.51□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Cd27P41272 250 aa10.5□□□□□ -0.73
Col7a1-202ENSMUST00000112070 1520401A03RikA0A0J9YVH6 598 aa10.5□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Gm9949Q8C9F4 104 aa10.5□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Wfdc6bF6ULY1 148 aa10.5□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Gm17606F6ZL36 78 aa10.5□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Csdc2Q91YQ3 154 aa10.5□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Gm12216A0A1W2P827 62 aa10.49□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Cd164Q9R0L9 197 aa10.49□□□□□ -0.73
Col7a1-202ENSMUST00000112070 BtcQ05928 177 aa10.49□□□□□ -0.73
Col7a1-202ENSMUST00000112070 4930535I16RikQ9CUI2 172 aa10.49□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Gm9913Q8BQQ2 135 aa10.48□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Pla2g2dQ9WVF6 144 aa10.48□□□□□ -0.73
Col7a1-202ENSMUST00000112070 TeppQ6IMH0 216 aa10.47□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Shisa2Q8QZV2 295 aa10.47□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Usp9yF8VPU6 2556 aa10.47□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Piezo2Q8CD54 2822 aa10.47□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Gm20538F6Z9R1 75 aa10.46□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Limd2Q8BGB5 128 aa10.46□□□□□ -0.73
Col7a1-202ENSMUST00000112070 CstadQ9D245 104 aa10.46□□□□□ -0.73
Col7a1-202ENSMUST00000112070 Col4a6B1AVK5 1691 aa10.46□□□□□ -0.74
Col7a1-202ENSMUST00000112070 Nupr2Q497P3 102 aa10.45□□□□□ -0.74
Col7a1-202ENSMUST00000112070 Dmbt1Q60997 2085 aa10.45□□□□□ -0.74
Col7a1-202ENSMUST00000112070 Znf239P24399 201 aa10.44□□□□□ -0.74
Col7a1-202ENSMUST00000112070 Ifitm6A0A1B0GS75 124 aa10.44□□□□□ -0.74
Col7a1-202ENSMUST00000112070 Defb40Q70KL2 73 aa10.42□□□□□ -0.74
Col7a1-202ENSMUST00000112070 Ighv2-3A0A075B696 115 aa10.42□□□□□ -0.74
Col7a1-202ENSMUST00000112070 Rps28P62858 69 aaKnown RBP10.42□□□□□ -0.74
Col7a1-202ENSMUST00000112070 P06329 120 aa10.42□□□□□ -0.74
Col7a1-202ENSMUST00000112070 2010109I03RikQ9CQ11 111 aa10.41□□□□□ -0.74
Col7a1-202ENSMUST00000112070 Pla2g1bQ9Z0Y2 146 aa10.41□□□□□ -0.74
Col7a1-202ENSMUST00000112070 Ighv8-11A0A075B5X4 119 aa10.41□□□□□ -0.74
Col7a1-202ENSMUST00000112070 Epg5Q80TA9 2572 aa10.41□□□□□ -0.74
Col7a1-202ENSMUST00000112070 CrygeQ03740 174 aa10.41□□□□□ -0.74
Col7a1-202ENSMUST00000112070 CrygfQ9CXV3 174 aa10.41□□□□□ -0.74
Col7a1-202ENSMUST00000112070 4930524J08RikQ9CUJ5 163 aa10.4□□□□□ -0.74
Col7a1-202ENSMUST00000112070 Nbeal1E9PYP2 2688 aa10.4□□□□□ -0.74
Col7a1-202ENSMUST00000112070 Ntn5Q3UQ22 452 aa10.4□□□□□ -0.74
Col7a1-202ENSMUST00000112070 Gm10509O88255 85 aa10.4□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Coa6Q8BGD8 79 aa10.4□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Ovol3D3YYM0 189 aa10.39□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Pip4p1Q3TWL2 284 aa10.39□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Gm10549Q3URY4 149 aa10.39□□□□□ -0.75
Col7a1-202ENSMUST00000112070 TshbP12656 138 aa10.39□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Spint4Q9D263 159 aa10.39□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Chchd10Q7TNL9 138 aa10.38□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Piezo1E2JF22 2547 aa10.38□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Gm10267M0QWD8 85 aa10.38□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Polr2kQ63871 58 aa10.38□□□□□ -0.75
Col7a1-202ENSMUST00000112070 1700011M02RikB1AX35 88 aa10.37□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Ly6c2P0CW03 131 aa10.37□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Gm20708H3BKF4 155 aa10.36□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Gm10570F6VB42 170 aa10.36□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Spry4Q9WTP2 300 aa10.36□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Cdc42se2Q8BGH7 84 aa10.35□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Col27a1Q5QNQ9 1845 aa10.35□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Ighv2-9A0A075B5Q5 116 aa10.35□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Gm10226O88253 85 aa10.35□□□□□ -0.75
Col7a1-202ENSMUST00000112070 MsmpB1AWI6 139 aa10.34□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Gm8439G3UWA7 96 aa10.34□□□□□ -0.75
Col7a1-202ENSMUST00000112070 Gm10845Q3UNY9 185 aa10.34□□□□□ -0.75
Col7a1-202ENSMUST00000112070 SbsponQ3UPR9 264 aa10.33□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Wfdc13Q5DQQ6 81 aa10.33□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Fhl2O70433 279 aa10.33□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Ighv1-72P01751 139 aa10.32□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Ighv2-5A0A0A6YY69 116 aa10.32□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Mp68P56379 58 aa10.32□□□□□ -0.76
Col7a1-202ENSMUST00000112070 4930518I15RikQ3V2W7 57 aa10.32□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Gm16485Q8C4B7 115 aa10.32□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Usp24B1AY13 2617 aaKnown RBP10.32□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Krtap27-1E9PX37 202 aa10.31□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Defb42Q8BVB5 75 aa10.31□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Trbv13-2A0A140T8N6 113 aa10.31□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Gm10490F6VBM2 120 aa10.3□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Chd8Q09XV5 2582 aaKnown RBP10.3□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Lmo4P61969 165 aa10.3□□□□□ -0.76
Col7a1-202ENSMUST00000112070 ScxQ64124 207 aa10.3□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Gm17509Q9CZ61 145 aa10.3□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Wfdc12Q9JHY3 85 aa10.3□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Gm5142Q8C5X9 133 aa10.29□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Col4a4Q9QZR9 1682 aa10.29□□□□□ -0.76
Col7a1-202ENSMUST00000112070 P01755 137 aa10.29□□□□□ -0.76
Col7a1-202ENSMUST00000112070 1700056E22RikF7CNM6 234 aa10.29□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Fam19a3Q7TPG6 132 aa10.29□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Ighv2-2A0A075B5P8 116 aa10.28□□□□□ -0.76
Col7a1-202ENSMUST00000112070 P01821 116 aa10.28□□□□□ -0.76
Col7a1-202ENSMUST00000112070 SrarpQ3ULG3 163 aa10.28□□□□□ -0.76
Col7a1-202ENSMUST00000112070 E130116L18RikQ8BMV6 101 aa10.28□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Myo18bE9PV66 2605 aa10.27□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Ighv1-56A0A0A6YXG2 117 aa10.27□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Gm5153P01627 120 aa10.27□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Ankrd11E9Q4F7 2643 aa10.27□□□□□ -0.76
Col7a1-202ENSMUST00000112070 Gpha2Q925Q5 128 aa10.26□□□□□ -0.77
Col7a1-202ENSMUST00000112070 Gm9922Q8C3P1 144 aa10.25□□□□□ -0.77
Col7a1-202ENSMUST00000112070 Gm10160F6Y577 67 aa10.25□□□□□ -0.77
Col7a1-202ENSMUST00000112070 Gm28230A0A0A0MQ91 144 aa10.25□□□□□ -0.77
Col7a1-202ENSMUST00000112070 Ighv8-13A0A075B5Y0 101 aa10.24□□□□□ -0.77
Col7a1-202ENSMUST00000112070 Gm10643Q3URG9 111 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 68.4 ms