RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Igkv14-111A0A140T8P9 117 aa6□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Dnajc13D4AFX7 2248 aaKnown RBP6□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Tln2Q71LX4 2375 aa6□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Usp9yF8VPU6 2556 aa5.99□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Gm9112A2AI92 75 aa5.99□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Gm11555B1AQ89 175 aa5.99□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Gm10401E9Q3K6 71 aa5.99□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Gm26566Q8CAC1 153 aa5.99□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Ighv5-6A0A075B5Q0 117 aa5.98□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Gm10767Q3TQP0 103 aa5.98□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Armcx4E9PWM3 2356 aa5.98□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Ighv1-56A0A0A6YXG2 117 aa5.98□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Igkv13-84A0A140T8N3 115 aa5.98□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Q9DAL9 119 aa5.98□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Setd2E9Q5F9 2537 aa5.97□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Igkv3-5A0A140T8M6 119 aa5.97□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Them7Q9DCP4 223 aa5.97□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Nsd1O88491 2588 aaKnown RBP5.97□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Trav9-4A0A0B4J1K2 113 aa5.97□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Gm11563B1AQ90 168 aa5.97□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Gm10570F6VB42 170 aa5.97□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Krtap4-7Q9D732 168 aa5.97□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Prrc2aQ7TSC1 2158 aaKnown RBP5.96□□□□□ -1.45
Upf3b-201ENSMUST00000076265 Gm16181B0V2H2 73 aa5.96□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Tac4Q99N14 128 aa5.96□□□□□ -1.46
Upf3b-201ENSMUST00000076265 4930470P17RikQ9D542 155 aa5.96□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Pdzd2E9Q1M1 2796 aa5.96□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Ighv2-6A0A075B6A7 116 aa5.96□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Q8BTC1 67 aa5.96□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Lyzl1Q9CPX3 148 aa5.96□□□□□ -1.46
Upf3b-201ENSMUST00000076265 AtrQ9JKK8 2635 aa5.95□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Smr2O09133 150 aa5.95□□□□□ -1.46
Upf3b-201ENSMUST00000076265 9930022D16RikQ8BG27 128 aa5.95□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Smim29Q8R043 75 aa5.95□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Igkv4-80A0A075B5L7 116 aa5.94□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Trav4-4-dv10A0A075B651 110 aa5.94□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Saa3P04918 122 aa5.94□□□□□ -1.46
Upf3b-201ENSMUST00000076265 9130213A22RikQ3V3T2 120 aa5.94□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Cdc42se2Q8BGH7 84 aa5.94□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Notch2O35516 2470 aa5.94□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Ighv7-3A0A075B5R2 120 aa5.94□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Gm26965M0QWH4 86 aa5.94□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Gm10881P01642 115 aa5.94□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Fam216bQ8CC14 138 aa5.94□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Prr15Q9D1T5 122 aa5.94□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Abca1P41233 2261 aa5.94□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Igkv4-53A0A0G2JFC6 119 aa5.93□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Defb45Q3V490 66 aa5.93□□□□□ -1.46
Upf3b-201ENSMUST00000076265 AI854703Q8BIN3 203 aa5.93□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Atox1O08997 68 aaKnown RBP5.93□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Sprr3O09116 238 aa5.93□□□□□ -1.46
Upf3b-201ENSMUST00000076265 IappP12968 93 aa5.93□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Q8BGJ3 129 aa5.93□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Reg3dQ9QUS9 175 aa5.93□□□□□ -1.46
Upf3b-201ENSMUST00000076265 CubnQ9JLB4 3623 aa5.93□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Fbn1Q61554 2873 aaKnown RBP5.93□□□□□ -1.46
Upf3b-201ENSMUST00000076265 BsnO88737 3942 aa5.93□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Ndufaf8A2AMZ4 74 aa5.92□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Odf3bQ5M8M2 238 aa5.92□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Tenm3Q9WTS6 2715 aa5.92□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Trav9d-4A0A0G2JG37 103 aa5.92□□□□□ -1.46
Upf3b-201ENSMUST00000076265 SnrpgP62309 76 aaKnown RBP5.92□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Ang5Q5GAN1 145 aa5.92□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Krtap26-1Q9D7N2 215 aa5.92□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Nf1Q04690 2841 aa5.91□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Rps27Q6ZWU9 84 aaKnown RBP5.91□□□□□ -1.46
Upf3b-201ENSMUST00000076265 EppinQ9DA01 134 aa5.91□□□□□ -1.46
Upf3b-201ENSMUST00000076265 PkdrejQ9Z0T6 2126 aa5.91□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Gm36368A0A1D5RLK8 91 aa5.91□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Cpsf4lE9Q2N0 280 aa5.91□□□□□ -1.46
Upf3b-201ENSMUST00000076265 ApelaP0DMC4 54 aa5.91□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Defb3Q9WTL0 63 aa5.91□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Fn1P11276 2477 aaKnown RBP5.9□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Trav9n-4A0A075B631 113 aa5.9□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Glrp1E9Q9S8 174 aa5.9□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Fxyd2Q04646 70 aa5.9□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Eif4ebp1Q60876 117 aa5.9□□□□□ -1.46
Upf3b-201ENSMUST00000076265 Chd9Q8BYH8 2885 aa5.9□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Tcl1b2P56841 117 aa5.9□□□□□ -1.47
Upf3b-201ENSMUST00000076265 GchfrP99025 84 aa5.9□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Higd1bQ99JY6 98 aa5.9□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Igsf10Q3V1M1 2594 aa5.89□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Itpr2Q9Z329 2701 aa5.89□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Ighv1-59A0A0A6YXE0 117 aa5.89□□□□□ -1.47
Upf3b-201ENSMUST00000076265 P01793 123 aa5.89□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Gm9903Q8C9Y8 129 aa5.89□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Ndufc1Q9CQY9 76 aa5.89□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Prpf8Q99PV0 2335 aaKnown RBP5.89□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Gm6525A0A0A6YW33 106 aa5.88□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Gm3250E9Q1M3 230 aa5.88□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Leprotl1Q9CQ74 131 aa5.88□□□□□ -1.47
Upf3b-201ENSMUST00000076265 TncQ80YX1 2110 aa5.88□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Igkv14-100A0A0G2JG36 117 aa5.88□□□□□ -1.47
Upf3b-201ENSMUST00000076265 6030445D17RikE9Q8F9 148 aa5.88□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Supt4h1bQ9Z199 117 aa5.88□□□□□ -1.47
Upf3b-201ENSMUST00000076265 1700011M02RikB1AX35 88 aa5.87□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Ifitm1Q9D103 106 aa5.87□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Zfp85Q7TMC9 473 aa5.87□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Defb29Q8BGW9 78 aa5.87□□□□□ -1.47
Upf3b-201ENSMUST00000076265 Lypd1Q8BLC3 141 aa5.87□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 120.6 ms