RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Igkv4-72A0A0B4J1I4 117 aa12.85□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Bles03Q8VD62 251 aa12.85□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Tomm7Q9D173 55 aa12.85□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 PemtQ61907 199 aa12.84□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Gm10577Q3UDV9 132 aa12.84□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Nhlrc1Q8BR37 401 aa12.84□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 9430069I07RikQ9CX21 111 aa12.83□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Lyrm9Q3UN90 78 aa12.83□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Prh1P05142 261 aa12.82□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Zfand2aQ9JII7 171 aa12.82□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Hivep3A2A884 2348 aa12.82□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Igkv1-35A0A0G2JDE5 120 aa12.82□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Tex15F8VPN2 2785 aa12.82□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Gm9767G3X930 207 aa12.81□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Foxc1Q61572 553 aa12.81□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Tm2d2Q8R0I4 213 aa12.81□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Defb29Q8BGW9 78 aa12.81□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Xlr5cQ9JJR2 179 aa12.8□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Ndufa12Q7TMF3 145 aaKnown RBP12.79□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Il19Q8CJ70 176 aa12.79□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Igkv4-53A0A0G2JFC6 119 aa12.78□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 5730596B20RikQ8BQ08 205 aa12.78□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Tenm4Q3UHK6 2771 aa12.78□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Trav14d-3-dv8A0A075B619 120 aa12.78□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Cox6b1P56391 86 aaKnown RBP12.78□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Gm10549Q3URY4 149 aa12.78□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Tmem213Q08EA8 116 aa12.77□□□□□ -0.36
Ccdc3-201ENSMUST00000027988 Trav13-1A0A075B644 110 aa12.76□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 Krtap24-1G3X9A2 248 aa12.76□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 Dand5Q76LW6 185 aa12.76□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 Igkv4-54A0A0G2JES9 117 aa12.75□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 Lage3Q9CR70 148 aa12.75□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 4930524J08RikQ9CUJ5 163 aa12.75□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 Rpl28P41105 137 aaKnown RBP12.75□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 Igkv1-99F6XWB2 120 aa12.74□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 Fbn1Q61554 2873 aaKnown RBP12.73□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 Ighv2-9-1A0A075B697 116 aa12.73□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 Igkv6-13A0A0G2JGY3 119 aa12.73□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 Cops9Q3U898 57 aa12.73□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 Trav13n-2A0A0G2JF93 110 aa12.72□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 Spink4O35679 86 aa12.72□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 SbsponQ3UPR9 264 aa12.71□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 Nbeal2Q6ZQA0 2742 aa12.71□□□□□ -0.37
Ccdc3-201ENSMUST00000027988 Odf3l2Q3TZ65 277 aa12.7□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 Gm10735Q3US96 136 aa12.7□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 SvipQ3UZP4 77 aa12.7□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 Atp5eP56382 52 aa12.69□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 Znf414Q9DCK4 299 aa12.69□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 Tenm1Q9WTS4 2731 aa12.69□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 Gm904Q3V2L5 102 aa12.69□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 Gm43218A0A0G2JGT0 114 aa12.68□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 Zfp951A0A087WRH0 451 aa12.68□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 Trav3-4A0A075B654 114 aa12.66□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 Igkv4-61A0A0G2JH00 117 aa12.66□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 Prss58Q8BW11 241 aa12.66□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 Leap2Q91V13 76 aa12.66□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 2010109I03RikQ9CQ11 111 aa12.65□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 Defa1P11477 93 aa12.65□□□□□ -0.38
Ccdc3-201ENSMUST00000027988 PrcdQ00LT2 53 aa12.65□□□□□ -0.39
Ccdc3-201ENSMUST00000027988 C530025M09RikF6RGA8 229 aa12.64□□□□□ -0.39
Ccdc3-201ENSMUST00000027988 Ss18l2Q9D174 77 aa12.64□□□□□ -0.39
Ccdc3-201ENSMUST00000027988 Trav13-2A0A075B649 110 aa12.63□□□□□ -0.39
Ccdc3-201ENSMUST00000027988 1810062G17RikG3X8Y2 129 aa12.63□□□□□ -0.39
Ccdc3-201ENSMUST00000027988 Mzt1Q8BUR9 78 aa12.61□□□□□ -0.39
Ccdc3-201ENSMUST00000027988 Gm5142Q8C5X9 133 aa12.61□□□□□ -0.39
Ccdc3-201ENSMUST00000027988 Trbv13-2A0A140T8N6 113 aa12.61□□□□□ -0.39
Ccdc3-201ENSMUST00000027988 Sprr1bQ62267 153 aa12.61□□□□□ -0.39
Ccdc3-201ENSMUST00000027988 Gm16381A0A1Y7VKT9 73 aa12.6□□□□□ -0.39
Ccdc3-201ENSMUST00000027988 MifP34884 115 aaKnown RBP12.59□□□□□ -0.39
Ccdc3-201ENSMUST00000027988 D730001G18RikA0A087WQU7 115 aa12.59□□□□□ -0.39
Ccdc3-201ENSMUST00000027988 Ighv1-59A0A0A6YXE0 117 aa12.59□□□□□ -0.39
Ccdc3-201ENSMUST00000027988 PkigO70139 76 aa12.59□□□□□ -0.39
Ccdc3-201ENSMUST00000027988 Ighv8-11A0A075B5X4 119 aa12.58□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Trav9n-4A0A075B631 113 aa12.58□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Gm28539A0A087WSL9 92 aa12.58□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Apoc4Q61268 124 aa12.58□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 4930519P11RikQ9CUJ8 166 aa12.58□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 CicQ924A2 2510 aa12.58□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Xcl1P47993 114 aa12.57□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Ighv1-56A0A0A6YXG2 117 aa12.57□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Gm10320E9PW43 113 aa12.56□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 SmcpP15265 143 aa12.56□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Gm7102J3QQ10 178 aa12.55□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Defa16P50714 93 aa12.55□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Rpl39lQ9CQD0 51 aa12.55□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Tmem223Q9CQE2 199 aaKnown RBP12.55□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Wfdc12Q9JHY3 85 aa12.55□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Ifitm6A0A1B0GS75 124 aa12.55□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Krtap11-1E9Q2E9 183 aa12.55□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Gm10845Q3UNY9 185 aa12.55□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 CrygfQ9CXV3 174 aa12.55□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Smim20D3Z7Q2 69 aa12.54□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Acyp1P56376 99 aa12.54□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Q8R092 253 aa12.54□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Gm5153P01627 120 aa12.54□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 BB014433Q8C5R5 389 aa12.54□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 Erdr1J3QMM0 206 aa12.53□□□□□ -0.4
Ccdc3-201ENSMUST00000027988 CrygdP04342 174 aa12.52□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 Igf1P05017 153 aa12.52□□□□□ -0.41
Ccdc3-201ENSMUST00000027988 CrygeQ03740 174 aa12.52□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms