RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Chd8Q09XV5 2582 aaKnown RBP10.77□□□□□ -0.69
Col7a1-201ENSMUST00000026740 Gm9949Q8C9F4 104 aa10.76□□□□□ -0.69
Col7a1-201ENSMUST00000026740 UqcrqQ9CQ69 82 aa10.76□□□□□ -0.69
Col7a1-201ENSMUST00000026740 4930556J24RikQ9D4U7 146 aa10.75□□□□□ -0.69
Col7a1-201ENSMUST00000026740 Igkv8-19A0A0G2JFN8 121 aa10.75□□□□□ -0.69
Col7a1-201ENSMUST00000026740 P01659 112 aa10.75□□□□□ -0.69
Col7a1-201ENSMUST00000026740 FcorP0DJI6 106 aa10.74□□□□□ -0.69
Col7a1-201ENSMUST00000026740 Col4a4Q9QZR9 1682 aa10.73□□□□□ -0.69
Col7a1-201ENSMUST00000026740 Usp24B1AY13 2617 aaKnown RBP10.73□□□□□ -0.69
Col7a1-201ENSMUST00000026740 Wfdc6bF6ULY1 148 aa10.72□□□□□ -0.69
Col7a1-201ENSMUST00000026740 Pip4p1Q3TWL2 284 aa10.72□□□□□ -0.69
Col7a1-201ENSMUST00000026740 C130032M10RikQ8C888 123 aa10.72□□□□□ -0.69
Col7a1-201ENSMUST00000026740 Epg5Q80TA9 2572 aa10.71□□□□□ -0.7
Col7a1-201ENSMUST00000026740 P06329 120 aa10.7□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Myo18bE9PV66 2605 aa10.7□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Ly6c2P0CW03 131 aa10.7□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Col27a1Q5QNQ9 1845 aa10.7□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Nbeal1E9PYP2 2688 aa10.7□□□□□ -0.7
Col7a1-201ENSMUST00000026740 CnfnQ6PCW6 111 aa10.69□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Ighv2-3A0A075B696 115 aa10.69□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Gm17606F6ZL36 78 aa10.69□□□□□ -0.7
Col7a1-201ENSMUST00000026740 BC107364E9Q5A2 140 aa10.69□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Lypd6Q8BPP5 171 aa10.69□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Smim1P0C8K7 78 aa10.68□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Rbx1P62878 108 aa10.67□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Dkk4Q8VEJ3 221 aa10.67□□□□□ -0.7
Col7a1-201ENSMUST00000026740 MsmpB1AWI6 139 aa10.67□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Spry4Q9WTP2 300 aa10.67□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Ankrd11E9Q4F7 2643 aa10.66□□□□□ -0.7
Col7a1-201ENSMUST00000026740 FasnP19096 2504 aaKnown RBP10.66□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Znf239P24399 201 aa10.65□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Gm10226O88253 85 aa10.65□□□□□ -0.7
Col7a1-201ENSMUST00000026740 Lmo4P61969 165 aa10.64□□□□□ -0.71
Col7a1-201ENSMUST00000026740 2010109I03RikQ9CQ11 111 aa10.64□□□□□ -0.71
Col7a1-201ENSMUST00000026740 Gm20708H3BKF4 155 aa10.63□□□□□ -0.71
Col7a1-201ENSMUST00000026740 Gm10509O88255 85 aa10.62□□□□□ -0.71
Col7a1-201ENSMUST00000026740 1520401A03RikA0A0J9YVH6 598 aa10.61□□□□□ -0.71
Col7a1-201ENSMUST00000026740 Fhl2O70433 279 aa10.61□□□□□ -0.71
Col7a1-201ENSMUST00000026740 Defb40Q70KL2 73 aa10.61□□□□□ -0.71
Col7a1-201ENSMUST00000026740 Ovol3D3YYM0 189 aa10.61□□□□□ -0.71
Col7a1-201ENSMUST00000026740 E130116L18RikQ8BMV6 101 aa10.61□□□□□ -0.71
Col7a1-201ENSMUST00000026740 Csdc2Q91YQ3 154 aa10.6□□□□□ -0.71
Col7a1-201ENSMUST00000026740 Smr3aQ61900 147 aa10.59□□□□□ -0.71
Col7a1-201ENSMUST00000026740 CrygeQ03740 174 aa10.59□□□□□ -0.71
Col7a1-201ENSMUST00000026740 CrygfQ9CXV3 174 aa10.59□□□□□ -0.71
Col7a1-201ENSMUST00000026740 TshbP12656 138 aa10.59□□□□□ -0.71
Col7a1-201ENSMUST00000026740 Ypel4Q65Z93 127 aa10.59□□□□□ -0.71
Col7a1-201ENSMUST00000026740 Defb42Q8BVB5 75 aa10.59□□□□□ -0.71
Col7a1-201ENSMUST00000026740 Gm12216A0A1W2P827 62 aa10.58□□□□□ -0.71
Col7a1-201ENSMUST00000026740 TeppQ6IMH0 216 aa10.58□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Gm1968Q3T9I3 115 aa10.58□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Ifitm6A0A1B0GS75 124 aa10.58□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Ntn5Q3UQ22 452 aa10.57□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Polr2kQ63871 58 aa10.57□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Chchd10Q7TNL9 138 aa10.57□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Gm20538F6Z9R1 75 aa10.57□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Cdc42se2Q8BGH7 84 aa10.57□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Gm21748Q3UE70 102 aa10.57□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Wfdc13Q5DQQ6 81 aa10.56□□□□□ -0.72
Col7a1-201ENSMUST00000026740 1700056E22RikF7CNM6 234 aa10.56□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Fam19a3Q7TPG6 132 aa10.55□□□□□ -0.72
Col7a1-201ENSMUST00000026740 1700011M02RikB1AX35 88 aa10.55□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Gm10490F6VBM2 120 aa10.55□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Ighv2-9A0A075B5Q5 116 aa10.54□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Gm10267M0QWD8 85 aa10.54□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Gm16485Q8C4B7 115 aa10.54□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Gm9922Q8C3P1 144 aa10.53□□□□□ -0.72
Col7a1-201ENSMUST00000026740 4930524J08RikQ9CUJ5 163 aa10.53□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Krtap27-1E9PX37 202 aa10.53□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Gm10549Q3URY4 149 aa10.53□□□□□ -0.72
Col7a1-201ENSMUST00000026740 Gm9925F6T2U3 160 aa10.52□□□□□ -0.73
Col7a1-201ENSMUST00000026740 Gm17509Q9CZ61 145 aa10.52□□□□□ -0.73
Col7a1-201ENSMUST00000026740 Wfdc12Q9JHY3 85 aa10.52□□□□□ -0.73
Col7a1-201ENSMUST00000026740 Limd2Q8BGB5 128 aa10.52□□□□□ -0.73
Col7a1-201ENSMUST00000026740 Gm8439G3UWA7 96 aa10.52□□□□□ -0.73
Col7a1-201ENSMUST00000026740 BtcQ05928 177 aa10.52□□□□□ -0.73
Col7a1-201ENSMUST00000026740 SrarpQ3ULG3 163 aa10.52□□□□□ -0.73
Col7a1-201ENSMUST00000026740 Ighv8-11A0A075B5X4 119 aa10.52□□□□□ -0.73
Col7a1-201ENSMUST00000026740 Ighv8-13A0A075B5Y0 101 aa10.51□□□□□ -0.73
Col7a1-201ENSMUST00000026740 Adm2Q7TNK8 150 aa10.51□□□□□ -0.73
Col7a1-201ENSMUST00000026740 PrlhG3UWC3 86 aa10.51□□□□□ -0.73
Col7a1-201ENSMUST00000026740 4930535I16RikQ9CUI2 172 aa10.51□□□□□ -0.73
Col7a1-201ENSMUST00000026740 Gpha2Q925Q5 128 aa10.5□□□□□ -0.73
Col7a1-201ENSMUST00000026740 P01755 137 aa10.5□□□□□ -0.73
Col7a1-201ENSMUST00000026740 Ighv1-72P01751 139 aa10.49□□□□□ -0.73
Col7a1-201ENSMUST00000026740 SbsponQ3UPR9 264 aa10.49□□□□□ -0.73
Col7a1-201ENSMUST00000026740 ScxQ64124 207 aa10.48□□□□□ -0.73
Col7a1-201ENSMUST00000026740 HrnrQ8VHD8 2496 aa10.48□□□□□ -0.73
Col7a1-201ENSMUST00000026740 Gm10845Q3UNY9 185 aa10.48□□□□□ -0.73
Col7a1-201ENSMUST00000026740 Gm10570F6VB42 170 aa10.48□□□□□ -0.73
Col7a1-201ENSMUST00000026740 Coa6Q8BGD8 79 aa10.47□□□□□ -0.73
Col7a1-201ENSMUST00000026740 Gm5142Q8C5X9 133 aa10.46□□□□□ -0.73
Col7a1-201ENSMUST00000026740 Gm28374F6SG70 93 aa10.46□□□□□ -0.74
Col7a1-201ENSMUST00000026740 AvpP35455 168 aa10.46□□□□□ -0.74
Col7a1-201ENSMUST00000026740 Gm12057A0A087WR21 115 aa10.46□□□□□ -0.74
Col7a1-201ENSMUST00000026740 Gm28230A0A0A0MQ91 144 aa10.44□□□□□ -0.74
Col7a1-201ENSMUST00000026740 Cd164Q9R0L9 197 aa10.43□□□□□ -0.74
Col7a1-201ENSMUST00000026740 Gm16223Q8CBM3 117 aa10.43□□□□□ -0.74
Col7a1-201ENSMUST00000026740 Zfand2aQ9JII7 171 aa10.42□□□□□ -0.74
Col7a1-201ENSMUST00000026740 Trbv13-2A0A140T8N6 113 aa10.42□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 166.5 ms