RNA–Protein interactions for RNA: ENSMUST00000168631.7

Pkp4-210, Transcript of Plakophilin-4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pkp4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-210ENSMUST00000168631 Igkv3-10A0A0G2JGN0 119 aa13.46□□□□□ -0.26
Pkp4-210ENSMUST00000168631 9430069I07RikQ9CX21 111 aa13.46□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Itpr1P11881 2749 aa13.45□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Fam222aQ6PGH4 453 aa13.45□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Kiaa1549Q68FD9 1940 aa13.45□□□□□ -0.26
Pkp4-210ENSMUST00000168631 CrygdP04342 174 aa13.45□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Defb12Q8K4N3 78 aa13.45□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Ighv1-66A0A075B5X5 117 aa13.44□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Trav4-3A0A0B4J1K1 110 aa13.44□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Fxyd5P97808 178 aa13.44□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Trav11A0A0B4J1J9 114 aa13.44□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Defb2P82020 71 aa13.43□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Esm1Q9QYY7 184 aa13.43□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Rbm3O89086 153 aaKnown RBP13.43□□□□□ -0.26
Pkp4-210ENSMUST00000168631 P01729 129 aa13.43□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Ighv1-63A0A075B5X2 117 aa13.43□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Gm3618D3Z4P5 127 aa13.42□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Spry2Q9QXV8 315 aa13.42□□□□□ -0.26
Pkp4-210ENSMUST00000168631 A0A286YCN5 57 aa13.41□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Gm10735Q3US96 136 aa13.41□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Ighv1-5A0A0A6YWG2 117 aa13.41□□□□□ -0.26
Pkp4-210ENSMUST00000168631 B9d2Q3UK10 175 aa13.41□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Q9DAQ5 155 aa13.41□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Cryba4Q9JJV0 196 aa13.41□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Mast4Q811L6 2618 aa13.4□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Mki67E9PVX6 3177 aaKnown RBP13.4□□□□□ -0.26
Pkp4-210ENSMUST00000168631 Pcsk5Q04592 1877 aa13.39□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Gm10490F6VBM2 120 aa13.39□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Tns1E9Q0S6 1888 aaKnown RBP13.39□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Ighv8-12A0A0G2JDE1 119 aa13.38□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Notch1Q01705 2531 aa13.38□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Igkv8-18A0A0B4J1J3 123 aa13.38□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Cd27P41272 250 aa13.38□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Gm8439G3UWA7 96 aa13.38□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Gm9767G3X930 207 aa13.37□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Rpl39lQ9CQD0 51 aa13.37□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Mrpl55Q9CZ83 127 aa13.37□□□□□ -0.27
Pkp4-210ENSMUST00000168631 E130114P18RikF6S0S7 154 aa13.37□□□□□ -0.27
Pkp4-210ENSMUST00000168631 U90926O08546 118 aa13.37□□□□□ -0.27
Pkp4-210ENSMUST00000168631 1700056E22RikF7CNM6 234 aa13.36□□□□□ -0.27
Pkp4-210ENSMUST00000168631 P01823 113 aa13.36□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Ly6hQ9WUC3 139 aa13.36□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Rbx1P62878 108 aa13.36□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Fgfbp3Q1HCM0 245 aa13.36□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Polr2kQ63871 58 aa13.36□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Ube2aQ9Z255 152 aa13.36□□□□□ -0.27
Pkp4-210ENSMUST00000168631 BtcQ05928 177 aa13.35□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Ighv1-62-1A0A075B5U3 116 aa13.35□□□□□ -0.27
Pkp4-210ENSMUST00000168631 GhrhP16043 103 aa13.35□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Acyp1P56376 99 aa13.35□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Gm37389A0A0A6YW05 95 aa13.34□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Ormdl1Q921I0 153 aa13.34□□□□□ -0.27
Pkp4-210ENSMUST00000168631 PscaP57096 123 aa13.34□□□□□ -0.27
Pkp4-210ENSMUST00000168631 Ighv3-3A0A0A6YWL2 116 aa13.33□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Eif4ebp1Q60876 117 aa13.32□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Gm10647E9Q8X0 124 aa13.31□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Cyyr1Q8VIH7 165 aa13.31□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Gcn1E9PVA8 2671 aaKnown RBP13.31□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Wfdc12Q9JHY3 85 aa13.31□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Lrp4Q8VI56 1905 aa13.3□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Gm12057A0A087WR21 115 aa13.3□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Ighv1-59A0A0A6YXE0 117 aa13.29□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Igkv3-5A0A140T8M6 119 aa13.29□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Ighv2-6-8A0A0A6YWY9 116 aa13.29□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Igf1P05017 153 aa13.29□□□□□ -0.28
Pkp4-210ENSMUST00000168631 ScxQ64124 207 aa13.29□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Col4a4Q9QZR9 1682 aa13.29□□□□□ -0.28
Pkp4-210ENSMUST00000168631 BikO70337 150 aa13.29□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Tmem254aP0DN89 123 aa13.28□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Tmem254bP0DN90 123 aa13.28□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Tmem254cP0DN91 123 aa13.28□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Fam19a1Q7TPG8 133 aa13.28□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Pla2g1bQ9Z0Y2 146 aa13.28□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Usp34Q6ZQ93 3582 aa13.28□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Ighv8-5A0A0A6YY60 119 aa13.28□□□□□ -0.28
Pkp4-210ENSMUST00000168631 CrygfQ9CXV3 174 aa13.28□□□□□ -0.28
Pkp4-210ENSMUST00000168631 Gm10401E9Q3K6 71 aa13.27□□□□□ -0.28
Pkp4-210ENSMUST00000168631 CtrlQ9ER05 264 aa13.27□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Prrc2cQ3TLH4 2846 aaKnown RBP13.27□□□□□ -0.29
Pkp4-210ENSMUST00000168631 FshbQ60687 130 aa13.26□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Cfc1P97766 202 aa13.26□□□□□ -0.29
Pkp4-210ENSMUST00000168631 9530003J23RikQ8BM26 151 aa13.26□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Hcfc1Q61191 2045 aaKnown RBP13.26□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Rtl10D3YWW5 146 aa13.26□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Gm21748Q3UE70 102 aa13.26□□□□□ -0.29
Pkp4-210ENSMUST00000168631 B430305J03RikQ8BQQ8 176 aa13.25□□□□□ -0.29
Pkp4-210ENSMUST00000168631 P01755 137 aa13.25□□□□□ -0.29
Pkp4-210ENSMUST00000168631 4930535I16RikQ9CUI2 172 aa13.25□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Gm17521F6QAC8 156 aa13.25□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Tfpi2O35536 230 aa13.25□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Defb42Q8BVB5 75 aa13.25□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Hectd1Q69ZR2 2618 aaKnown RBP13.25□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Brk1Q91VR8 75 aa13.24□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Smrp1Q2MH31 260 aa13.24□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Gm9922Q8C3P1 144 aa13.23□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Fgf23Q9EPC2 251 aa13.23□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Ankrd17Q99NH0 2603 aaKnown RBP13.22□□□□□ -0.29
Pkp4-210ENSMUST00000168631 B230217C12RikE9Q3Z1 139 aa13.22□□□□□ -0.29
Pkp4-210ENSMUST00000168631 Gm3443F7CCV5 94 aa13.22□□□□□ -0.29
Pkp4-210ENSMUST00000168631 SrarpQ3ULG3 163 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 71.9 ms