RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 TcraP01849 138 aa16.14■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Rpl13aP19253 203 aaKnown RBP16.14■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Ndufa12Q7TMF3 145 aaKnown RBP16.14■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Chchd1Q9CQA6 118 aa16.14■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Ighv2-9A0A075B5Q5 116 aa16.13■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Trdv2-1A0A0G2JGB9 116 aa16.13■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Ndufa1O35683 70 aa16.13■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Gm42420A0A0J9YUQ2 99 aa16.12■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 SeboxP70368 190 aa16.12■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Bsph1Q3UW26 133 aa16.12■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Fam241bQ9D882 120 aa16.12■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Rab24P35290 203 aa16.11■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Gng4P50153 75 aa16.11■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 CnbpP53996 178 aaKnown RBP16.11■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Gm10837Q3UTT8 145 aa16.1■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Ube2d1P61080 147 aaKnown RBP16.09■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Srsf9Q9D0B0 222 aaKnown RBP16.09■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Gm10542F6XDR3 90 aa16.08■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 SpinklQ8CEK3 90 aa16.08■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 3110070M22RikQ9DAQ7 118 aa16.08■□□□□ 0.17
Cpsf4-201ENSMUST00000070487 Sprr1bQ62267 153 aa16.08■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 P01896 185 aa16.07■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 Hist1h2bmP10854 126 aa16.07■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 Hist1h2bhQ64478 126 aa16.07■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 Hist2h2bbQ64525 126 aa16.07■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 Hist1h2bcQ6ZWY9 126 aaKnown RBP16.07■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 SacsQ9JLC8 4582 aa16.05■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 9430069I07RikQ9CX21 111 aa16.05■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 Sec11aQ9R0P6 179 aa16.05■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 Plpp2Q9DAX2 276 aa16.04■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 Trav13d-4A0A0G2JFX3 110 aa16.03■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 Gm45521A0A1B0GRK0 198 aa16.03■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 Fgf6P21658 208 aa16.03■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 Mrps10Q80ZK0 160 aaKnown RBP16.03■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 Prss58Q8BW11 241 aa16.03■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 Timm10bQ9WV96 100 aa16.03■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 Igkv4-92A0A0B4J1I2 117 aa16.02■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 Fat1A0A1L1SQU7 4645 aa16.02■□□□□ 0.16
Cpsf4-201ENSMUST00000070487 PlnP61014 52 aa16.01■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 Gm1968Q3T9I3 115 aa16.01■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 Ube2wQ8VDW4 151 aa16.01■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 Aqp7O54794 303 aa16■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 Tmem170bP86050 132 aa16■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 RetnlaQ9EP95 111 aa16■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 Esp34G3UXG0 151 aa15.99■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 Krtap13O88375 197 aa15.99■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 4930519P11RikQ9CUJ8 166 aa15.99■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 1700012A03RikQ9DAF1 130 aa15.99■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 BC106179Q8C9L1 186 aa15.98■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 Trav13-4-dv7A0A075B6C2 110 aa15.97■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 Esp24A8R0V6 68 aa15.97■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 SmagpQ99KC7 97 aa15.97■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 Ss18l2Q9D174 77 aa15.97■□□□□ 0.15
Cpsf4-201ENSMUST00000070487 Cib3Q0P523 160 aa15.95■□□□□ 0.14
Cpsf4-201ENSMUST00000070487 Ovol2Q8CIV7 274 aa15.95■□□□□ 0.14
Cpsf4-201ENSMUST00000070487 Mfap4Q9D1H9 257 aa15.95■□□□□ 0.14
Cpsf4-201ENSMUST00000070487 NpyP57774 97 aa15.94■□□□□ 0.14
Cpsf4-201ENSMUST00000070487 Ankrd39Q9D2X0 183 aa15.94■□□□□ 0.14
Cpsf4-201ENSMUST00000070487 Igkv2-137A0A0B4J1H6 120 aa15.94■□□□□ 0.14
Cpsf4-201ENSMUST00000070487 Defa9P50707 93 aa15.94■□□□□ 0.14
Cpsf4-201ENSMUST00000070487 Stard4Q99JV5 224 aa15.94■□□□□ 0.14
Cpsf4-201ENSMUST00000070487 Gm10130F6ZHM5 101 aa15.93■□□□□ 0.14
Cpsf4-201ENSMUST00000070487 Gm10735Q3US96 136 aa15.93■□□□□ 0.14
Cpsf4-201ENSMUST00000070487 Gm1553Q66VB7 94 aa15.93■□□□□ 0.14
Cpsf4-201ENSMUST00000070487 Pkhd1E9PZ36 4059 aa15.92■□□□□ 0.14
Cpsf4-201ENSMUST00000070487 Tmem97Q8VD00 176 aa15.92■□□□□ 0.14
Cpsf4-201ENSMUST00000070487 Cited1P97769 203 aa15.9■□□□□ 0.14
Cpsf4-201ENSMUST00000070487 Fam104aA2A6P4 185 aa15.88■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 P18527 97 aa15.88■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 Igkv3-2A0A075B5P0 119 aa15.87■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 Gm10842Q3U587 122 aa15.87■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 Cox8cA6H666 72 aa15.86■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 P01794 123 aa15.86■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 Defa10P50708 93 aa15.86■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 Cox7b2Q9D2H1 82 aa15.86■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 Ighv1-56A0A0A6YXG2 117 aa15.86■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 S100a1P56565 94 aa15.86■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 Rbm7Q9CQT2 265 aaKnown RBP15.86■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 Sprr4Q8CGN8 76 aa15.84■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 Mpv17l2Q8VIK2 200 aa15.84■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 Trav11A0A0B4J1J9 114 aa15.83■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 Igkv8-24A0A140T8P5 121 aa15.83■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 Chac1Q8R3J5 223 aa15.83■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 Zfand2aQ9JII7 171 aa15.83■□□□□ 0.13
Cpsf4-201ENSMUST00000070487 Bsph2Q0Q236 131 aa15.83■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 Gm10065F6TJM2 114 aa15.82■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 Sprr1aQ62266 144 aa15.82■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 BB014433Q8C5R5 389 aa15.82■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 ScxQ64124 207 aa15.81■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 Tomm6Q9CQN3 74 aa15.81■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 Q9D727 114 aa15.81■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 Tmem86bQ497J1 226 aa15.8■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 Ighv1-62-1A0A075B5U3 116 aa15.79■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 A730009L09RikA0A1B0GS82 72 aa15.79■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 Tcrg-V4A0A0B4J1J8 138 aa15.79■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 Tnp2P11378 117 aa15.79■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 Hrct1Q9D6B9 109 aa15.79■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 Josd1Q9DBJ6 202 aa15.79■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 Psmb2Q9R1P3 201 aa15.79■□□□□ 0.12
Cpsf4-201ENSMUST00000070487 PkigO70139 76 aa15.78■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 95.1 ms