RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Akap13E9Q394 2776 aa13.12□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Defb42Q8BVB5 75 aa13.11□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Sostdc1Q9CQN4 206 aa13.11□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Gm17472A0A075B683 117 aa13.1□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Morn3Q8C5T4 241 aa13.1□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Prelid3aQ8VE85 172 aa13.1□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Gm7075D3Z497 112 aa13.1□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Cd164l2Q9D6W7 172 aa13.1□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Rnf152Q8BG47 203 aa13.09□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Krtap16-1A2A5X5 502 aa13.09□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 P01745 121 aa13.08□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 Nop10Q9CQS2 64 aa13.08□□□□□ -0.31
Ccdc3-201ENSMUST00000027988 NipblQ6KCD5 2798 aaKnown RBP13.08□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Tfpi2O35536 230 aa13.08□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Anapc13Q8R034 74 aa13.08□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Plac8l1Q08EJ0 177 aa13.07□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Defb26Q30KN7 186 aa13.07□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 H1fxQ80ZM5 188 aa13.07□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Defb2P82020 71 aa13.07□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Ly6hQ9WUC3 139 aa13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Epg5Q80TA9 2572 aa13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 TrrapQ80YV3 2565 aaKnown RBP13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Trav9d-3A0A075B695 113 aa13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Crlf1Q9JM58 425 aa13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Zfp462B1AWL2 2495 aaKnown RBP13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Gm7257D3YX25 99 aa13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Timm17bQ9Z0V7 172 aa13.06□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Mast4Q811L6 2618 aa13.05□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Gm10251J3QPM5 127 aa13.05□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Ighv1-62-1A0A075B5U3 116 aa13.04□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Rpl35aO55142 110 aa13.04□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Gm9922Q8C3P1 144 aa13.04□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 4930442H23RikQ9D5G7 103 aa13.04□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Smrp1Q2MH31 260 aa13.03□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Cdc42se2Q8BGH7 84 aa13.03□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Spata25Q9DA57 226 aa13.03□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Trav4-3A0A0B4J1K1 110 aa13.03□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Sh2d1aO88890 126 aa13.03□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Atp5g1Q9CR84 136 aa13.03□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Rpl36aP83882 106 aaKnown RBP13.02□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Gm10767Q3TQP0 103 aa13.02□□□□□ -0.32
Ccdc3-201ENSMUST00000027988 Trav4d-3A0A075B625 110 aa13.01□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Trav13-4-dv7A0A075B6C2 110 aa13.01□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Scgb1b24B1B0N6 92 aa13.01□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Gm26661M0QWV4 156 aa13.01□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Eif4ebp1Q60876 117 aa13.01□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 SpinklQ8CEK3 90 aa13.01□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Ube2wQ8VDW4 151 aa13.01□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Wdr38Q9D994 303 aa13□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Znf740Q6NZQ6 180 aa13□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Prr13Q9CQJ5 137 aa13□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 1700010B08RikQ9DAI7 102 aa13□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Myo18bE9PV66 2605 aa13□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 1700020N15RikL7MTX3 112 aa12.99□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 CrygaP04345 174 aa12.99□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 1700011M02RikB1AX35 88 aa12.99□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Cox7a1P56392 80 aa12.98□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Gm10772F7AIG4 85 aa12.98□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Gm3250E9Q1M3 230 aa12.97□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Spry2Q9QXV8 315 aa12.97□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Trav9d-4A0A0G2JG37 103 aa12.96□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Brwd1Q921C3 2304 aa12.96□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 CdsnQ7TPC1 561 aa12.96□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Cd99Q8VCN6 175 aa12.96□□□□□ -0.33
Ccdc3-201ENSMUST00000027988 Gpha2Q925Q5 128 aa12.96□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Fxyd5P97808 178 aa12.95□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 CirbpP60824 172 aaKnown RBP12.95□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Phpt1Q9DAK9 124 aa12.95□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Trav11A0A0B4J1J9 114 aa12.94□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 4930546C10RikE9Q4Y3 121 aa12.94□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Ighv1-61P01749 117 aa12.94□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 C2cd3Q52KB6 2323 aa12.93□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 TeppQ6IMH0 216 aa12.93□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 4930544G11RikQ9CR99 193 aa12.93□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Ighv1-49A0A0A6YWX2 117 aa12.92□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Pglyrp4Q0VB07 374 aa12.92□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Lyrm7Q9DA03 104 aa12.92□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Gm10647E9Q8X0 124 aa12.92□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Lst1O08843 95 aa12.92□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Ppp1r32Q148A4 427 aa12.92□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Cox6cQ9CPQ1 76 aa12.92□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Setd2E9Q5F9 2537 aa12.9□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 SelenowP63300 88 aa12.9□□□□□ -0.34
Ccdc3-201ENSMUST00000027988 Pfn2Q9JJV2 140 aa12.89□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Defb50Q6TU36 73 aa12.89□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 B230359F08RikA0A0B4J1K3 109 aa12.88□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Trav13d-4A0A0G2JFX3 110 aa12.88□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 P01755 137 aa12.88□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 GfyJ3KML8 504 aa12.87□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Ly6c2P0CW03 131 aa12.87□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Ndufa3Q9CQ91 84 aa12.87□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 MobpQ9D2P8 170 aa12.87□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Esm1Q9QYY7 184 aa12.87□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Chchd7Q8K2Q5 85 aa12.87□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 MrapQ9D159 127 aa12.86□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Gm3233E9Q2H5 230 aa12.86□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 MalO09198 153 aa12.86□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Vmo1Q5SXG7 201 aa12.86□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Pla2g1bQ9Z0Y2 146 aa12.86□□□□□ -0.35
Ccdc3-201ENSMUST00000027988 Igkv1-117A0A140T8M0 119 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 165.9 ms