RNA–Protein interactions for RNA: ENSMUST00000168631.7

Pkp4-210, Transcript of Plakophilin-4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pkp4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-210ENSMUST00000168631 Nbeal1E9PYP2 2688 aa13.7□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Ighv2-3A0A075B696 115 aa13.7□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Usp24B1AY13 2617 aaKnown RBP13.7□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Spink10Q8CAC8 162 aa13.7□□□□□ -0.22
Pkp4-210ENSMUST00000168631 B230359F08RikA0A0B4J1K3 109 aa13.69□□□□□ -0.22
Pkp4-210ENSMUST00000168631 P01745 121 aa13.69□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Rpl32P62911 135 aaKnown RBP13.69□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Igkv1-88A0A140T8N1 120 aa13.69□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Tm2d2Q8R0I4 213 aa13.69□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Cep192E9Q4Y4 2514 aaKnown RBP13.68□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Gm44965A0A0N4SVR3 59 aa13.68□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Pla2g2dQ9WVF6 144 aa13.68□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Odf3Q920N1 254 aa13.67□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Snai3Q9QY31 287 aa13.67□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Trav13n-2A0A0G2JF93 110 aa13.67□□□□□ -0.22
Pkp4-210ENSMUST00000168631 PemtQ61907 199 aa13.67□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Reg3bP35230 175 aa13.66□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Gm12689Q8BQU9 117 aa13.66□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Gm9936Q8C864 160 aa13.66□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Ociad2Q9D8W7 154 aa13.66□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Tcte2E9PY37 120 aa13.66□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Sigmar1O55242 223 aa13.66□□□□□ -0.22
Pkp4-210ENSMUST00000168631 P0C913 63 aa13.65□□□□□ -0.22
Pkp4-210ENSMUST00000168631 Gm14137Q8CE97 175 aa13.65□□□□□ -0.22
Pkp4-210ENSMUST00000168631 PlaurP35456 327 aa13.64□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Camk2n2Q78WH7 79 aa13.64□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Lypd6Q8BPP5 171 aa13.64□□□□□ -0.23
Pkp4-210ENSMUST00000168631 AtrQ9JKK8 2635 aa13.63□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Klk12B2RVZ0 247 aa13.63□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Tax1bp3Q9DBG9 124 aa13.63□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Triap1Q9D8Z2 76 aa13.63□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Igkv4-58A0A0G2JGI6 119 aa13.63□□□□□ -0.23
Pkp4-210ENSMUST00000168631 1520401A03RikA0A0J9YVH6 598 aa13.63□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Jbts17Q8CE72 3214 aa13.63□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Ighv1-11A0A0A6YWI9 117 aa13.62□□□□□ -0.23
Pkp4-210ENSMUST00000168631 BC107364E9Q5A2 140 aa13.62□□□□□ -0.23
Pkp4-210ENSMUST00000168631 C1qcQ02105 246 aa13.62□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Gm17472A0A075B683 117 aa13.61□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Igkv2-109A0A075B5K6 120 aa13.61□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Znf575Q3TXZ1 239 aa13.6□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Q9D8Q6 235 aa13.6□□□□□ -0.23
Pkp4-210ENSMUST00000168631 PrlhG3UWC3 86 aa13.6□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Gm3285A0A1W2P7U0 201 aa13.6□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Gm7173A0A0G2JEB6 3132 aa13.6□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Ighv2-6A0A075B6A7 116 aa13.6□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Igkv1-35A0A0G2JDE5 120 aa13.6□□□□□ -0.23
Pkp4-210ENSMUST00000168631 P18527 97 aa13.6□□□□□ -0.23
Pkp4-210ENSMUST00000168631 BB014433Q8C5R5 389 aa13.6□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Igkv8-26A0A075B5N5 123 aa13.59□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Inafm2A0A1L1STD6 152 aa13.59□□□□□ -0.23
Pkp4-210ENSMUST00000168631 FcorP0DJI6 106 aa13.58□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Ramp1Q9WTJ5 148 aa13.58□□□□□ -0.23
Pkp4-210ENSMUST00000168631 Gphb5Q812B2 130 aa13.58□□□□□ -0.24
Pkp4-210ENSMUST00000168631 A130051J06RikQ8CAU1 227 aa13.58□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Gm10295Q8CCF3 114 aa13.58□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Ypel4Q65Z93 127 aa13.57□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Gm20726G3UX18 150 aa13.56□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Gm10251J3QPM5 127 aa13.56□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Gm10226O88253 85 aa13.56□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Gm5629P06327 117 aa13.56□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Gm2916Q9D9B9 127 aa13.56□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Ighv1-85A0A075B5Y6 117 aa13.56□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Ighv1-75A0A075B5Y2 117 aa13.55□□□□□ -0.24
Pkp4-210ENSMUST00000168631 PpdpfQ9CR37 115 aa13.55□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Trav4d-3A0A075B625 110 aa13.54□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Fgf6P21658 208 aa13.54□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Cox7b2Q9D2H1 82 aa13.54□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Gm26602M0QWA4 95 aa13.53□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Ebi3O35228 228 aa13.53□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Ly6c2P0CW03 131 aa13.53□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Pet100P0DJE0 76 aa13.53□□□□□ -0.24
Pkp4-210ENSMUST00000168631 CenpfE9Q3P4 2997 aaKnown RBP13.53□□□□□ -0.24
Pkp4-210ENSMUST00000168631 LhbO09108 141 aa13.53□□□□□ -0.24
Pkp4-210ENSMUST00000168631 Tmem243B2RVB9 118 aa13.52□□□□□ -0.24
Pkp4-210ENSMUST00000168631 TshbP12656 138 aa13.52□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Gm16223Q8CBM3 117 aa13.52□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Rnf185Q91YT2 192 aa13.52□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Fn1P11276 2477 aaKnown RBP13.52□□□□□ -0.25
Pkp4-210ENSMUST00000168631 1700010B08RikQ9DAI7 102 aa13.52□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Ufsp1Q9CZP0 217 aa13.51□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Akap13E9Q394 2776 aa13.51□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Cox11Q6P8I6 275 aa13.51□□□□□ -0.25
Pkp4-210ENSMUST00000168631 2010109I03RikQ9CQ11 111 aa13.51□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Fhl2O70433 279 aa13.5□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Trav9n-4A0A075B631 113 aa13.5□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Ovol3D3YYM0 189 aa13.5□□□□□ -0.25
Pkp4-210ENSMUST00000168631 1110002E22RikE0CYV9 1786 aa13.5□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Psmb8P28063 276 aa13.49□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Rpl18aP62717 176 aaKnown RBP13.49□□□□□ -0.25
Pkp4-210ENSMUST00000168631 1700012A03RikQ9DAF1 130 aa13.49□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Pla2g2eQ9QUL3 142 aa13.49□□□□□ -0.25
Pkp4-210ENSMUST00000168631 AngP21570 145 aa13.48□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Ighv1-72P01751 139 aa13.47□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Map1aQ9QYR6 2776 aa13.47□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Gm17577J3QNF7 156 aa13.47□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Tmem223Q9CQE2 199 aaKnown RBP13.47□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Gata1P17679 413 aa13.47□□□□□ -0.25
Pkp4-210ENSMUST00000168631 Gm26566Q8CAC1 153 aa13.47□□□□□ -0.25
Pkp4-210ENSMUST00000168631 PtprbB2RU80 1998 aa13.46□□□□□ -0.25
Pkp4-210ENSMUST00000168631 SbsponQ3UPR9 264 aa13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 71.2 ms