RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 CenpeQ6RT24 2474 aaKnown RBP12.1□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 7420426K07RikQ3UX66 186 aa12.1□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 CstadQ9D245 104 aa12.1□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Ramp1Q9WTJ5 148 aa12.1□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 MgamB5THE2 1827 aa12.1□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 TncQ80YX1 2110 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Ighv3-1A0A075B5S6 116 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Ighv1-12A0A0A6YXJ9 117 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Gm20708H3BKF4 155 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Gm17324Q8C6J8 137 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Hrct1Q9D6B9 109 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Med12A2AGH6 2190 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 P01837 106 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 B230307C23RikQ8BLB2 64 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Timm17aQ9Z0V8 171 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Gm15294V9GXA7 121 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Igkv4-54A0A0G2JES9 117 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Gm6034E9Q101 117 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Igkv4-72A0A0B4J1I4 117 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Gm20481G3UXK4 153 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Cox11Q6P8I6 275 aa12.09□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Plxnb1Q8CJH3 2119 aa12.08□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 9230109A22RikQ8BHE6 111 aa12.08□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 UrahQ9CRB3 118 aa12.08□□□□□ -0.47
Pcdha9-201ENSMUST00000115659 Defa27F2Z403 93 aa12.08□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Igkv6-13A0A0G2JGY3 119 aa12.08□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 IgipA0A1B0GR74 53 aa12.08□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Gm21994F6T2D2 329 aa12.08□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Rmi2Q3UPE3 149 aa12.08□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 BC048562Q80ZQ7 204 aa12.08□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Obox8V9GWY9 217 aa12.08□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 MsmpB1AWI6 139 aa12.07□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Hoxd3P09027 433 aa12.07□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 AvpP35455 168 aa12.07□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Spink12Q9D256 87 aa12.07□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Col6a4A2AX52 2309 aa12.07□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 CadB2RQC6 2225 aa12.07□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Rai1Q61818 1889 aa12.07□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Vsig4F6TUL9 280 aa12.07□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 SelenowP63300 88 aa12.07□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Ang4Q3TMQ6 144 aa12.07□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Spag11Q8K4N2 71 aa12.07□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 MplkipQ9D011 178 aa12.06□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Anapc1P53995 1944 aaKnown RBP12.06□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Trav4-3A0A0B4J1K1 110 aa12.06□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Gm5468Q8C3D3 155 aa12.06□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Odf1Q61999 247 aa12.06□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Q99M08 65 aa12.06□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Nbl1Q61477 178 aa12.05□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Fam24aQ8CF27 98 aa12.05□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Trbv16A0A0B4J1H3 115 aa12.05□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Ndufb4Q9CQC7 129 aa12.05□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 P01753 117 aa12.05□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Ociad2Q9D8W7 154 aa12.05□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Arfgef3Q3UGY8 2170 aa12.04□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Foxi2Q3I5G5 311 aa12.04□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 PkdrejQ9Z0T6 2126 aa12.04□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Gm21060J3KMU4 56 aa12.04□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Lst1O08843 95 aa12.04□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Pglyrp1O88593 182 aa12.04□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Defa21Q8C1P2 93 aa12.04□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Nop10Q9CQS2 64 aa12.04□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Ndufa1O35683 70 aa12.04□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Igkv4-79A0A075B5L8 119 aa12.03□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 GhrhP16043 103 aa12.03□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Igkv4-69A0A0B4J1I6 116 aa12.03□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Gm10295Q8CCF3 114 aa12.03□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Glrp1E9Q9S8 174 aa12.03□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Nsun4C4P6S0 806 aaKnown RBP12.03□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Defb29Q8BGW9 78 aa12.03□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Gm15128A2ADW8 449 aa12.02□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Gm15093A2BI72 449 aa12.02□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Luzp4B1AV09 449 aa12.02□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Gm15107B1B0X0 449 aa12.02□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Gm15097E9QA14 449 aa12.02□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Gm15085Q62012 449 aa12.02□□□□□ -0.48
Pcdha9-201ENSMUST00000115659 Gvin1Q80SU7 2427 aa12.02□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 P01643 108 aa12.02□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 NpyP57774 97 aa12.02□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Crip1P63254 77 aa12.02□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Fam110dQ80X91 271 aa12.02□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Trav9-2A0A075B647 113 aa12.01□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Iglv1A0A075B663 117 aa12.01□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Trav9-4A0A0B4J1K2 113 aa12.01□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 P01748 117 aa12.01□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Igkv4-78A0A0A6YYE5 119 aa12.01□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Iglc1A0A0G2JE99 106 aa12.01□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Gm15127B1AVZ5 449 aa12.01□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Gm15091B1AZM2 449 aa12.01□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 P01674 108 aa12.01□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 P01843 105 aa12.01□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 9130230L23RikQ8CC80 163 aa12.01□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Gm20730A0A075B5J6 119 aa12.01□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Gm10553J3QPF1 123 aa12.01□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Hoxb4P10284 250 aa12.01□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Gm7257D3YX25 99 aa12□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 P01658 132 aa12□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Egr2P08152 470 aa12□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Parp4E9PYK3 1969 aa12□□□□□ -0.49
Pcdha9-201ENSMUST00000115659 Oxld1Q9CR10 201 aa11.99□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 104.2 ms