RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 YND1P40009 630 aa3.64□□□□□ -1.83
snR56snR56 SQS1P53866 767 aaKnown RBP3.64□□□□□ -1.83
snR56snR56 BET4Q00618 327 aa3.64□□□□□ -1.83
snR56snR56 ECM16Q04217 1267 aaKnown RBP3.64□□□□□ -1.83
snR56snR56 ECM22Q05958 814 aaPredicted RBP3.64□□□□□ -1.83
snR56snR56 SEC12P11655 471 aa3.63□□□□□ -1.83
snR56snR56 SAP1P39955 897 aaKnown RBP3.63□□□□□ -1.83
snR56snR56 MAM1P40065 302 aa3.63□□□□□ -1.83
snR56snR56 YJL107CP42947 387 aa3.63□□□□□ -1.83
snR56snR56 UBP16Q02863 499 aa3.63□□□□□ -1.83
snR56snR56 DIG1Q03063 452 aaKnown RBP3.63□□□□□ -1.83
snR56snR56 GSH2Q08220 491 aa3.63□□□□□ -1.83
snR56snR56 RRP8P38961 392 aaKnown RBP3.62□□□□□ -1.83
snR56snR56 GZF3P42944 551 aaKnown RBP3.62□□□□□ -1.83
snR56snR56 PLM2Q04383 521 aa3.62□□□□□ -1.83
snR56snR56 RPL42AP0CX27 106 aaKnown RBP3.61□□□□□ -1.83
snR56snR56 RPL42BP0CX28 106 aaKnown RBP3.61□□□□□ -1.83
snR56snR56 RPL8AP17076 256 aaKnown RBP3.61□□□□□ -1.83
snR56snR56 HXT4P32467 576 aa3.61□□□□□ -1.83
snR56snR56 PTA1Q01329 785 aaPredicted RBP3.61□□□□□ -1.83
snR56snR56 ACS1Q01574 713 aa3.61□□□□□ -1.83
snR56snR56 YER175W-AQ8TGU4 54 aa3.61□□□□□ -1.83
snR56snR56 YLR281CQ05863 155 aa3.6□□□□□ -1.83
snR56snR56 AEP2P22136 580 aa3.59□□□□□ -1.83
snR56snR56 DHH1P39517 506 aaKnown RBP3.59□□□□□ -1.83
snR56snR56 MNN11P46985 422 aaKnown RBP3.59□□□□□ -1.83
snR56snR56 COS12P53053 380 aa3.59□□□□□ -1.83
snR56snR56 YNL144CP53907 740 aa3.59□□□□□ -1.83
snR56snR56 MTQ2Q03920 221 aaPredicted RBP3.59□□□□□ -1.83
snR56snR56 RKM3P38222 552 aa3.58□□□□□ -1.84
snR56snR56 ARN1P38731 627 aa3.58□□□□□ -1.84
snR56snR56 ORC5P50874 479 aa3.58□□□□□ -1.84
snR56snR56 NGL1Q08213 363 aaKnown RBP3.58□□□□□ -1.84
snR56snR56 SES1P07284 462 aaKnown RBP3.57□□□□□ -1.84
snR56snR56 CWH43P25618 953 aa3.57□□□□□ -1.84
snR56snR56 NIC96P34077 839 aa3.57□□□□□ -1.84
snR56snR56 DID4P36108 232 aa3.57□□□□□ -1.84
snR56snR56 TYS1P36421 394 aaKnown RBP3.57□□□□□ -1.84
snR56snR56 PCL6P40038 420 aa3.57□□□□□ -1.84
snR56snR56 OSW7P43611 510 aa3.57□□□□□ -1.84
snR56snR56 SMA2Q04658 369 aa3.57□□□□□ -1.84
snR56snR56 YML053CQ04978 212 aa3.57□□□□□ -1.84
snR56snR56 YDL242WQ07746 117 aa3.57□□□□□ -1.84
snR56snR56 NOP14Q99207 810 aaKnown RBP3.57□□□□□ -1.84
snR56snR56 CDC23P16522 626 aa3.56□□□□□ -1.84
snR56snR56 UBP7P40453 1071 aa3.56□□□□□ -1.84
snR56snR56 QRI7P43122 407 aa3.56□□□□□ -1.84
snR56snR56 YAT1P80235 687 aa3.56□□□□□ -1.84
snR56snR56 GPN2Q08726 347 aaPredicted RBP3.56□□□□□ -1.84
snR56snR56 YTM1Q12024 460 aaPredicted RBP3.56□□□□□ -1.84
snR56snR56 NOP56Q12460 504 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
snR56snR56 FMP42Q04991 504 aa3.55□□□□□ -1.84
snR56snR56 FPR4Q06205 392 aaPredicted RBP3.55□□□□□ -1.84
snR56snR56 KGD2P19262 463 aaPredicted RBP3.54□□□□□ -1.84
snR56snR56 ATP12P22135 325 aa3.54□□□□□ -1.84
snR56snR56 GSH1P32477 678 aa3.54□□□□□ -1.84
snR56snR56 MDR1P53258 950 aa3.54□□□□□ -1.84
snR56snR56 IRC5P43610 853 aa3.53□□□□□ -1.84
snR56snR56 RNH70P53331 553 aa3.53□□□□□ -1.84
snR56snR56 IMP4P53941 290 aaKnown RBP3.53□□□□□ -1.84
snR56snR56 VPS5Q92331 675 aa3.53□□□□□ -1.84
snR56snR56 ARG1P22768 420 aa3.52□□□□□ -1.85
snR56snR56 SRP68P38687 599 aaKnown RBP3.52□□□□□ -1.85
snR56snR56 ARO9P38840 513 aaPredicted RBP3.52□□□□□ -1.85
snR56snR56 SND1Q04007 877 aa3.52□□□□□ -1.85
snR56snR56 THI73Q07904 523 aa3.52□□□□□ -1.85
snR56snR56 MNN2P38069 597 aa3.51□□□□□ -1.85
snR56snR56 VBA2P38358 474 aaKnown RBP3.51□□□□□ -1.85
snR56snR56 VPS41P38959 992 aa3.51□□□□□ -1.85
snR56snR56 TPA1P40032 644 aaKnown RBP3.51□□□□□ -1.85
snR56snR56 YLR352WQ06479 807 aa3.51□□□□□ -1.85
snR56snR56 TIP41Q12199 356 aa3.51□□□□□ -1.85
snR56snR56 PRP16P15938 1071 aaPredicted RBP3.5□□□□□ -1.85
snR56snR56 SEC1P30619 724 aaKnown RBP3.5□□□□□ -1.85
snR56snR56 SER1P33330 395 aaKnown RBP3.5□□□□□ -1.85
snR56snR56 STB5P38699 743 aa3.5□□□□□ -1.85
snR56snR56 BZZ1P38822 633 aa3.5□□□□□ -1.85
snR56snR56 RNR4P49723 345 aaKnown RBP3.5□□□□□ -1.85
snR56snR56 EAF7P53911 425 aaKnown RBP3.5□□□□□ -1.85
snR56snR56 YOR378WQ08902 515 aa3.5□□□□□ -1.85
snR56snR56 YPL191CQ08930 360 aa3.5□□□□□ -1.85
snR56snR56 CDC1P40986 491 aa3.49□□□□□ -1.85
snR56snR56 MNT2P53059 558 aa3.49□□□□□ -1.85
snR56snR56 FCP1Q03254 732 aa3.49□□□□□ -1.85
snR56snR56 RSA1Q08932 381 aa3.49□□□□□ -1.85
snR56snR56 APL5Q08951 932 aaKnown RBP3.49□□□□□ -1.85
snR56snR56 YLR112WQ12130 139 aa3.49□□□□□ -1.85
snR56snR56 HLJ1P48353 224 aa3.48□□□□□ -1.85
snR56snR56 IZH1Q03419 316 aa3.48□□□□□ -1.85
snR56snR56 URA3P03962 267 aa3.47□□□□□ -1.85
snR56snR56 PTC6P25646 442 aa3.47□□□□□ -1.85
snR56snR56 PRP45P28004 379 aaPredicted RBP3.47□□□□□ -1.85
snR56snR56 MSS51P32335 436 aa3.47□□□□□ -1.85
snR56snR56 EXO84P38261 753 aa3.47□□□□□ -1.85
snR56snR56 SLX1P38324 304 aa3.47□□□□□ -1.85
snR56snR56 ASG1P40467 964 aa3.47□□□□□ -1.85
snR56snR56 ROK1P45818 564 aaPredicted RBP3.47□□□□□ -1.85
snR56snR56 VPS25P47142 202 aa3.47□□□□□ -1.85
snR56snR56 CRZ1P53968 678 aa3.47□□□□□ -1.85
snR56snR56 DNM1P54861 757 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 44.2 ms