RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W NOG2P53742 486 aaKnown RBP10.5□□□□□ -0.73
MSF1YPR047W ERG5P54781 538 aa10.5□□□□□ -0.73
MSF1YPR047W VPS9P54787 451 aa10.5□□□□□ -0.73
MSF1YPR047W YPL113CQ02961 396 aa10.5□□□□□ -0.73
MSF1YPR047W RPL17AP05740 184 aaKnown RBP10.5□□□□□ -0.73
MSF1YPR047W MNE1P24720 663 aa10.5□□□□□ -0.73
MSF1YPR047W ERG6P25087 383 aaKnown RBP10.5□□□□□ -0.73
MSF1YPR047W PAT1P25644 796 aaKnown RBP10.5□□□□□ -0.73
MSF1YPR047W MEI4P29467 408 aa10.5□□□□□ -0.73
MSF1YPR047W AIM26P32858 118 aa10.5□□□□□ -0.73
MSF1YPR047W YKL151CP36059 337 aa10.5□□□□□ -0.73
MSF1YPR047W SET5P38890 526 aaKnown RBP10.5□□□□□ -0.73
MSF1YPR047W SPC72P39723 622 aa10.5□□□□□ -0.73
MSF1YPR047W PAN6P40459 309 aa10.5□□□□□ -0.73
MSF1YPR047W RPL17BP46990 184 aaKnown RBP10.5□□□□□ -0.73
MSF1YPR047W YJR124CP47159 448 aa10.5□□□□□ -0.73
MSF1YPR047W NRD1P53617 575 aaKnown RBP RIP-Chip data10.5□□□□□ -0.73not detected
MSF1YPR047W SNO2P53823 222 aa10.5□□□□□ -0.73
MSF1YPR047W UTP5Q04177 643 aaKnown RBP10.5□□□□□ -0.73
MSF1YPR047W YPR114WQ06107 315 aa10.5□□□□□ -0.73
MSF1YPR047W YFT2Q06676 274 aa10.5□□□□□ -0.73
MSF1YPR047W PUF3Q07807 879 aaKnown RBP RIP-Chip data10.5□□□□□ -0.73 RIP-Chip
MSF1YPR047W RPN8Q08723 338 aaKnown RBP10.5□□□□□ -0.73
MSF1YPR047W LEU1P07264 779 aaKnown RBP10.49□□□□□ -0.73
MSF1YPR047W SEC23P15303 768 aaKnown RBP10.49□□□□□ -0.73
MSF1YPR047W SNF5P18480 905 aa10.49□□□□□ -0.73
MSF1YPR047W YHL041WP38730 149 aa10.49□□□□□ -0.73
MSF1YPR047W MVP1P40959 511 aaKnown RBP10.49□□□□□ -0.73
MSF1YPR047W RFX1P48743 811 aa10.49□□□□□ -0.73
MSF1YPR047W YGR127WP53275 312 aa10.49□□□□□ -0.73
MSF1YPR047W IPI3P53877 555 aa10.49□□□□□ -0.73
MSF1YPR047W RPL34AP87262 121 aaPredicted RBP10.49□□□□□ -0.73
MSF1YPR047W YMR178WQ03219 274 aaKnown RBP10.49□□□□□ -0.73
MSF1YPR047W TRE2Q08693 809 aa10.49□□□□□ -0.73
MSF1YPR047W GNT1Q12096 491 aa10.49□□□□□ -0.73
MSF1YPR047W SPT15P13393 240 aaKnown RBP10.48□□□□□ -0.73
MSF1YPR047W AAT2P23542 418 aaKnown RBP10.48□□□□□ -0.73
MSF1YPR047W ROX1P25042 368 aa10.48□□□□□ -0.73
MSF1YPR047W TAE1P38340 232 aa10.48□□□□□ -0.73
MSF1YPR047W ATM1P40416 690 aa10.48□□□□□ -0.73
MSF1YPR047W SWS2P53937 143 aa10.48□□□□□ -0.73
MSF1YPR047W NGL3Q03210 505 aa10.48□□□□□ -0.73
MSF1YPR047W SCH9P11792 824 aaKnown RBP10.47□□□□□ -0.73
MSF1YPR047W POL30P15873 258 aaKnown RBP10.47□□□□□ -0.73
MSF1YPR047W YCR015CP25616 317 aa10.47□□□□□ -0.73
MSF1YPR047W MRS6P32864 603 aaKnown RBP10.47□□□□□ -0.73
MSF1YPR047W RRT2P38332 387 aa10.47□□□□□ -0.73
MSF1YPR047W LTP1P40347 161 aa10.47□□□□□ -0.73
MSF1YPR047W DUG1P43616 481 aaKnown RBP10.47□□□□□ -0.73
MSF1YPR047W SUM1P46676 1062 aa10.47□□□□□ -0.73
MSF1YPR047W TRM82Q03774 444 aa10.47□□□□□ -0.73
MSF1YPR047W PPN1Q04119 674 aa10.47□□□□□ -0.73
MSF1YPR047W UFO1Q04511 668 aa10.47□□□□□ -0.73
MSF1YPR047W PGC1Q08959 321 aa10.47□□□□□ -0.73
MSF1YPR047W OCA6Q12454 224 aa10.47□□□□□ -0.73
MSF1YPR047W SUC2P00724 532 aa10.46□□□□□ -0.74
MSF1YPR047W PMA2P19657 947 aa10.46□□□□□ -0.74
MSF1YPR047W ALY1P36117 915 aa10.46□□□□□ -0.74
MSF1YPR047W TGL4P36165 910 aa10.46□□□□□ -0.74
MSF1YPR047W ERV46P39727 415 aa10.46□□□□□ -0.74
MSF1YPR047W ROK1P45818 564 aaPredicted RBP10.46□□□□□ -0.74
MSF1YPR047W SUN4P53616 420 aa10.46□□□□□ -0.74
MSF1YPR047W ENT5Q03769 411 aaKnown RBP10.46□□□□□ -0.74
MSF1YPR047W YDR278CQ05612 105 aa10.46□□□□□ -0.74
MSF1YPR047W THI7Q05998 598 aa10.46□□□□□ -0.74
MSF1YPR047W ATG10Q07879 167 aa10.46□□□□□ -0.74
MSF1YPR047W CMS1Q07897 291 aaKnown RBP10.46□□□□□ -0.74
MSF1YPR047W DAS2Q12084 232 aa10.46□□□□□ -0.74
MSF1YPR047W YEL077CQ3E7X8 1277 aa10.46□□□□□ -0.74
MSF1YPR047W ERG11P10614 530 aa10.45□□□□□ -0.74
MSF1YPR047W RRP3P38712 501 aaKnown RBP10.45□□□□□ -0.74
MSF1YPR047W OTU2P38747 307 aaKnown RBP10.45□□□□□ -0.74
MSF1YPR047W BRO1P48582 844 aa10.45□□□□□ -0.74
MSF1YPR047W NBP35P52920 328 aa10.45□□□□□ -0.74
MSF1YPR047W MTO1P53070 669 aa10.45□□□□□ -0.74
MSF1YPR047W SPC105P53148 917 aa10.45□□□□□ -0.74
MSF1YPR047W POL2P21951 2222 aaKnown RBP10.45□□□□□ -0.74
MSF1YPR047W CIN8P27895 1000 aa10.44□□□□□ -0.74
MSF1YPR047W KNS1P32350 737 aaPredicted RBP10.44□□□□□ -0.74
MSF1YPR047W YBL055CP34220 418 aaPredicted RBP10.44□□□□□ -0.74
MSF1YPR047W SLD2P34252 453 aa10.44□□□□□ -0.74
MSF1YPR047W PPE1P38796 400 aa10.44□□□□□ -0.74
MSF1YPR047W FLC2P39719 783 aa10.44□□□□□ -0.74
MSF1YPR047W VAC7P53950 1165 aa10.44□□□□□ -0.74
MSF1YPR047W REG1Q00816 1014 aa10.44□□□□□ -0.74
MSF1YPR047W AAD15Q08361 143 aa10.44□□□□□ -0.74
MSF1YPR047W CBC2Q08920 208 aaKnown RBP RIP-Chip data10.44□□□□□ -0.74not detected
MSF1YPR047W RTT10Q08924 1013 aa10.44□□□□□ -0.74
MSF1YPR047W APL4Q12028 832 aa10.44□□□□□ -0.74
MSF1YPR047W COX5AP00424 153 aa10.43□□□□□ -0.74
MSF1YPR047W PMS1P14242 873 aa10.43□□□□□ -0.74
MSF1YPR047W SLY1P22213 666 aa10.43□□□□□ -0.74
MSF1YPR047W BRF1P29056 596 aa10.43□□□□□ -0.74
MSF1YPR047W PCA1P38360 1216 aa10.43□□□□□ -0.74
MSF1YPR047W LEU5P38702 357 aa10.43□□□□□ -0.74
MSF1YPR047W IST3P40565 148 aaPredicted RBP10.43□□□□□ -0.74
MSF1YPR047W SIP4P46954 829 aa10.43□□□□□ -0.74
MSF1YPR047W TIM13P53299 105 aa10.43□□□□□ -0.74
MSF1YPR047W SRO7Q12038 1033 aa10.43□□□□□ -0.74
MSF1YPR047W UBR1P19812 1950 aa10.43□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms