RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W TPK1P06244 397 aa2.41□□□□□ -2.02
RRP6YOR001W PET122P10355 254 aa2.41□□□□□ -2.02
RRP6YOR001W CKA1P15790 372 aa2.41□□□□□ -2.02
RRP6YOR001W RNQ1P25367 405 aa2.41□□□□□ -2.02
RRP6YOR001W PGS1P25578 521 aa2.41□□□□□ -2.02
RRP6YOR001W MTH1P35198 433 aa2.41□□□□□ -2.02
RRP6YOR001W MRPL7P36519 292 aa2.41□□□□□ -2.02
RRP6YOR001W UBP13P38187 747 aa2.41□□□□□ -2.02
RRP6YOR001W UME6P39001 836 aa2.41□□□□□ -2.02
RRP6YOR001W NUP60P39705 539 aa2.41□□□□□ -2.02
RRP6YOR001W TMN3P40071 706 aa2.41□□□□□ -2.02
RRP6YOR001W SPO22P40511 975 aa2.41□□□□□ -2.02
RRP6YOR001W TEL2P53038 688 aa2.41□□□□□ -2.02
RRP6YOR001W MDR1P53258 950 aa2.41□□□□□ -2.02
RRP6YOR001W INN1P53901 409 aa2.41□□□□□ -2.02
RRP6YOR001W REG1Q00816 1014 aa2.41□□□□□ -2.02
RRP6YOR001W NGL2Q03264 515 aaKnown RBP2.41□□□□□ -2.02
RRP6YOR001W RCF1Q03713 159 aa2.41□□□□□ -2.02
RRP6YOR001W SYF1Q04048 859 aaPredicted RBP2.41□□□□□ -2.02
RRP6YOR001W YLR224WQ05947 369 aa2.41□□□□□ -2.02
RRP6YOR001W ACK1Q07622 623 aaPredicted RBP2.41□□□□□ -2.02
RRP6YOR001W NMD4Q12129 218 aa2.41□□□□□ -2.02
RRP6YOR001W PRS5Q12265 496 aaKnown RBP2.41□□□□□ -2.02
RRP6YOR001W LAT1P12695 482 aaKnown RBP2.4□□□□□ -2.03
RRP6YOR001W ERG8P24521 451 aa2.4□□□□□ -2.03
RRP6YOR001W YCR061WP25639 631 aa2.4□□□□□ -2.03
RRP6YOR001W CNS1P33313 385 aa2.4□□□□□ -2.03
RRP6YOR001W LST4P34239 828 aa2.4□□□□□ -2.03
RRP6YOR001W LRP1P38801 184 aaKnown RBP2.4□□□□□ -2.03
RRP6YOR001W YEL057CP39983 233 aa2.4□□□□□ -2.03
RRP6YOR001W FKH2P41813 862 aa2.4□□□□□ -2.03
RRP6YOR001W VPS4P52917 437 aa2.4□□□□□ -2.03
RRP6YOR001W DSD1P53095 428 aa2.4□□□□□ -2.03
RRP6YOR001W YGR054WP53235 642 aaKnown RBP2.4□□□□□ -2.03
RRP6YOR001W SNO2P53823 222 aa2.4□□□□□ -2.03
RRP6YOR001W RPS15Q01855 142 aaKnown RBP2.4□□□□□ -2.03
RRP6YOR001W MUB1Q03162 620 aa2.4□□□□□ -2.03
RRP6YOR001W USA1Q03714 838 aa2.4□□□□□ -2.03
RRP6YOR001W HOF1Q05080 669 aa2.4□□□□□ -2.03
RRP6YOR001W IZH3Q07959 543 aa2.4□□□□□ -2.03
RRP6YOR001W SPE4Q12455 300 aa2.4□□□□□ -2.03
RRP6YOR001W YOL159C-AQ3E769 90 aa2.4□□□□□ -2.03
RRP6YOR001W CPA2P03965 1118 aaKnown RBP2.4□□□□□ -2.03
RRP6YOR001W NAT1P12945 854 aaKnown RBP2.4□□□□□ -2.03
RRP6YOR001W TPM1P17536 199 aaKnown RBP2.4□□□□□ -2.03
RRP6YOR001W YCK1P23291 538 aa2.4□□□□□ -2.03
RRP6YOR001W URK1P27515 501 aa2.4□□□□□ -2.03
RRP6YOR001W MPT5P39016 859 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
RRP6YOR001W YJL193WP39542 402 aa2.4□□□□□ -2.03
RRP6YOR001W AAD10P47182 288 aa2.4□□□□□ -2.03
RRP6YOR001W SNF12P53628 566 aa2.4□□□□□ -2.03
RRP6YOR001W MRPL22P53881 309 aa2.4□□□□□ -2.03
RRP6YOR001W ATG21Q02887 496 aa2.4□□□□□ -2.03
RRP6YOR001W RAD30Q04049 632 aa2.4□□□□□ -2.03
RRP6YOR001W AIM41Q12032 185 aa2.4□□□□□ -2.03
RRP6YOR001W HIF1Q12373 385 aa2.4□□□□□ -2.03
RRP6YOR001W ZRT2Q12436 422 aa2.4□□□□□ -2.03
RRP6YOR001W GRX6Q12438 231 aa2.4□□□□□ -2.03
RRP6YOR001W RTN2Q12443 393 aa2.4□□□□□ -2.03
RRP6YOR001W PNO1Q99216 274 aaKnown RBP2.4□□□□□ -2.03
RRP6YOR001W SIR3P06701 978 aa2.39□□□□□ -2.03
RRP6YOR001W YML003WP0CF16 290 aa2.39□□□□□ -2.03
RRP6YOR001W CDC24P11433 854 aaPredicted RBP2.39□□□□□ -2.03
RRP6YOR001W RED1P14291 827 aa2.39□□□□□ -2.03
RRP6YOR001W FUR1P18562 216 aaKnown RBP2.39□□□□□ -2.03
RRP6YOR001W CAP1P28495 268 aaKnown RBP2.39□□□□□ -2.03
RRP6YOR001W BYE1P36106 594 aa2.39□□□□□ -2.03
RRP6YOR001W CCT6P39079 546 aa2.39□□□□□ -2.03
RRP6YOR001W KHA1P40309 873 aa2.39□□□□□ -2.03
RRP6YOR001W ZAP1P47043 880 aa2.39□□□□□ -2.03
RRP6YOR001W UBC11P52492 156 aa2.39□□□□□ -2.03
RRP6YOR001W FHN1P53279 174 aa2.39□□□□□ -2.03
RRP6YOR001W YMR155WQ03795 547 aa2.39□□□□□ -2.03
RRP6YOR001W CTK1Q03957 528 aaKnown RBP2.39□□□□□ -2.03
RRP6YOR001W RXT3Q07458 294 aa2.39□□□□□ -2.03
RRP6YOR001W RIX7Q07844 837 aaKnown RBP2.39□□□□□ -2.03
RRP6YOR001W TMA16Q08687 178 aa2.39□□□□□ -2.03
RRP6YOR001W CTI6Q08923 506 aa2.39□□□□□ -2.03
RRP6YOR001W CHS5Q12114 671 aaKnown RBP2.39□□□□□ -2.03
RRP6YOR001W NBP2Q12163 236 aa2.39□□□□□ -2.03
RRP6YOR001W SFI1Q12369 946 aa2.39□□□□□ -2.03
RRP6YOR001W ISN1Q99312 450 aa2.39□□□□□ -2.03
RRP6YOR001W Q0010Q9ZZX9 128 aa2.39□□□□□ -2.03
RRP6YOR001W GCN4P03069 281 aa2.38□□□□□ -2.03
RRP6YOR001W TRP4P07285 380 aaPredicted RBP2.38□□□□□ -2.03
RRP6YOR001W PFK2P16862 959 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
RRP6YOR001W VPS34P22543 875 aa2.38□□□□□ -2.03
RRP6YOR001W PRP28P23394 588 aa2.38□□□□□ -2.03
RRP6YOR001W EFT1P32324 842 aaKnown RBP2.38□□□□□ -2.03
RRP6YOR001W DSS4P32601 143 aa2.38□□□□□ -2.03
RRP6YOR001W ALY1P36117 915 aa2.38□□□□□ -2.03
RRP6YOR001W SRO77P38163 1010 aa2.38□□□□□ -2.03
RRP6YOR001W MUM2P38236 366 aa2.38□□□□□ -2.03
RRP6YOR001W ARO9P38840 513 aaPredicted RBP2.38□□□□□ -2.03
RRP6YOR001W FLC2P39719 783 aa2.38□□□□□ -2.03
RRP6YOR001W IST3P40565 148 aaPredicted RBP2.38□□□□□ -2.03
RRP6YOR001W MPS3P47069 682 aa2.38□□□□□ -2.03
RRP6YOR001W LYS4P49367 693 aaPredicted RBP2.38□□□□□ -2.03
RRP6YOR001W MUP1P50276 574 aa2.38□□□□□ -2.03
RRP6YOR001W IMO32P53219 342 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 172.7 ms