RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeast

Gene CPR8, Length 927 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPR8	YNR028W	BI2	P03873	423 aa		4.71	□□□□□ -1.66
CPR8	YNR028W	YEF3	P16521	1044 aa	Known RBP	4.71	□□□□□ -1.66
CPR8	YNR028W	STT3	P39007	718 aa	Known RBP	4.71	□□□□□ -1.66
CPR8	YNR028W	LTP1	P40347	161 aa		4.71	□□□□□ -1.66
CPR8	YNR028W	RAD26	P40352	1085 aa		4.71	□□□□□ -1.66
CPR8	YNR028W	BST1	P43571	1029 aa		4.71	□□□□□ -1.66
CPR8	YNR028W	HRD3	Q05787	833 aa		4.71	□□□□□ -1.66
CPR8	YNR028W	BSP1	Q06604	576 aa		4.71	□□□□□ -1.66
CPR8	YNR028W	CYK3	Q07533	885 aa		4.71	□□□□□ -1.66
CPR8	YNR028W	YDL242W	Q07746	117 aa		4.71	□□□□□ -1.66
CPR8	YNR028W	FRE7	Q12333	620 aa		4.71	□□□□□ -1.66
CPR8	YNR028W	PTP1	P25044	335 aa		4.7	□□□□□ -1.66
CPR8	YNR028W	RRP43	P25359	394 aa	Predicted RBP	4.7	□□□□□ -1.66
CPR8	YNR028W	BEM3	P32873	1128 aa		4.7	□□□□□ -1.66
CPR8	YNR028W	APM3	P38153	483 aa		4.7	□□□□□ -1.66
CPR8	YNR028W	VPS8	P39702	1274 aa		4.7	□□□□□ -1.66
CPR8	YNR028W	BNA3	P47039	444 aa	Known RBP	4.7	□□□□□ -1.66
CPR8	YNR028W	ESF2	P53743	316 aa	Known RBP	4.7	□□□□□ -1.66
CPR8	YNR028W	MOT3	P54785	490 aa	Known RBP	4.7	□□□□□ -1.66
CPR8	YNR028W	YML053C	Q04978	212 aa		4.7	□□□□□ -1.66
CPR8	YNR028W	SPN1	Q06505	410 aa	Predicted RBP	4.7	□□□□□ -1.66
CPR8	YNR028W	HIM1	Q06674	414 aa		4.7	□□□□□ -1.66
CPR8	YNR028W	YOL057W	Q08225	711 aa		4.7	□□□□□ -1.66
CPR8	YNR028W	ICL2	Q12031	575 aa		4.7	□□□□□ -1.66
CPR8	YNR028W	LCB4	Q12246	624 aa		4.7	□□□□□ -1.66
CPR8	YNR028W	TOP1	P04786	769 aa		4.69	□□□□□ -1.66
CPR8	YNR028W	MSS18	P08593	268 aa		4.69	□□□□□ -1.66
CPR8	YNR028W	KGD2	P19262	463 aa	Predicted RBP	4.69	□□□□□ -1.66
CPR8	YNR028W	SIR1	P21691	654 aa		4.69	□□□□□ -1.66
CPR8	YNR028W	SAP1	P39955	897 aa	Known RBP	4.69	□□□□□ -1.66
CPR8	YNR028W	CIR1	P42940	261 aa		4.69	□□□□□ -1.66
CPR8	YNR028W	BPL1	P48445	690 aa	Predicted RBP	4.69	□□□□□ -1.66
CPR8	YNR028W	YNL058C	P53947	316 aa		4.69	□□□□□ -1.66
CPR8	YNR028W	AAT1	Q01802	451 aa		4.69	□□□□□ -1.66
CPR8	YNR028W	PLM2	Q04383	521 aa		4.69	□□□□□ -1.66
CPR8	YNR028W	BRE1	Q07457	700 aa	Known RBP	4.69	□□□□□ -1.66
CPR8	YNR028W	AFT2	Q08957	416 aa		4.69	□□□□□ -1.66
CPR8	YNR028W	Q0010	Q9ZZX9	128 aa		4.69	□□□□□ -1.66
CPR8	YNR028W	PIF1	P07271	859 aa		4.68	□□□□□ -1.66
CPR8	YNR028W	POL3	P15436	1097 aa		4.68	□□□□□ -1.66
CPR8	YNR028W	URE2	P23202	354 aa	Known RBP	4.68	□□□□□ -1.66
CPR8	YNR028W	MSH1	P25846	959 aa		4.68	□□□□□ -1.66
CPR8	YNR028W	FRD1	P32614	470 aa	Known RBP	4.68	□□□□□ -1.66
CPR8	YNR028W	CAB2	P40506	365 aa		4.68	□□□□□ -1.66
CPR8	YNR028W	ULP2	P40537	1034 aa	Predicted RBP	4.68	□□□□□ -1.66
CPR8	YNR028W	NMD5	P46970	1048 aa		4.68	□□□□□ -1.66
CPR8	YNR028W	NET1	P47035	1189 aa		4.68	□□□□□ -1.66
CPR8	YNR028W	YPL071C	Q02864	156 aa		4.68	□□□□□ -1.66
CPR8	YNR028W	RRP6	Q12149	733 aa	Known RBP	4.68	□□□□□ -1.66
CPR8	YNR028W	YLR111W	Q12528	110 aa		4.68	□□□□□ -1.66
CPR8	YNR028W	PNO1	Q99216	274 aa	Known RBP	4.68	□□□□□ -1.66
CPR8	YNR028W	PDE1	P22434	369 aa		4.67	□□□□□ -1.66
CPR8	YNR028W	RIT1	P23796	513 aa		4.67	□□□□□ -1.66
CPR8	YNR028W	MCM3	P24279	971 aa	Known RBP	4.67	□□□□□ -1.66
CPR8	YNR028W	VPS27	P40343	622 aa	Known RBP	4.67	□□□□□ -1.66
CPR8	YNR028W	SNO3	P43544	222 aa		4.67	□□□□□ -1.66
CPR8	YNR028W	YPL108W	Q02872	168 aa	Predicted RBP	4.67	□□□□□ -1.66
CPR8	YNR028W	ARA2	Q04212	335 aa		4.67	□□□□□ -1.66
CPR8	YNR028W	TPO3	Q06451	622 aa		4.67	□□□□□ -1.66
CPR8	YNR028W	IWR1	Q07532	353 aa	Predicted RBP	4.67	□□□□□ -1.66
CPR8	YNR028W	RTC1	Q08281	1341 aa		4.67	□□□□□ -1.66
CPR8	YNR028W	SWC3	P31376	625 aa		4.66	□□□□□ -1.66
CPR8	YNR028W	SIP1	P32578	815 aa		4.66	□□□□□ -1.66
CPR8	YNR028W	RPF2	P36160	344 aa	Known RBP	4.66	□□□□□ -1.66
CPR8	YNR028W	PSA1	P41940	361 aa	Known RBP	4.66	□□□□□ -1.66
CPR8	YNR028W	ERG13	P54839	491 aa	Known RBP	4.66	□□□□□ -1.66
CPR8	YNR028W	ATG21	Q02887	496 aa		4.66	□□□□□ -1.66
CPR8	YNR028W	EIS1	Q05050	843 aa	Known RBP	4.66	□□□□□ -1.66
CPR8	YNR028W	YBR255C-A	Q3E776	120 aa		4.66	□□□□□ -1.66
CPR8	YNR028W	ADE3	P07245	946 aa	Known RBP	4.65	□□□□□ -1.67
CPR8	YNR028W	MIS1	P09440	975 aa	Known RBP	4.65	□□□□□ -1.67
CPR8	YNR028W	KES1	P35844	434 aa	Known RBP	4.65	□□□□□ -1.67
CPR8	YNR028W	YHL041W	P38730	149 aa		4.65	□□□□□ -1.67
CPR8	YNR028W	CPR6	P53691	371 aa	Known RBP	4.65	□□□□□ -1.67
CPR8	YNR028W	RSC9	Q03124	581 aa		4.65	□□□□□ -1.67
CPR8	YNR028W	YOR389W	Q08912	624 aa		4.65	□□□□□ -1.67
CPR8	YNR028W	YPL191C	Q08930	360 aa		4.65	□□□□□ -1.67
CPR8	YNR028W	PRS5	Q12265	496 aa	Known RBP	4.65	□□□□□ -1.67
CPR8	YNR028W	SEC18	P18759	758 aa	Known RBP	4.64	□□□□□ -1.67
CPR8	YNR028W	SWI4	P25302	1093 aa	Known RBP	4.64	□□□□□ -1.67
CPR8	YNR028W	FTH1	P38310	465 aa		4.64	□□□□□ -1.67
CPR8	YNR028W	VBA2	P38358	474 aa	Known RBP	4.64	□□□□□ -1.67
CPR8	YNR028W	SPC72	P39723	622 aa		4.64	□□□□□ -1.67
CPR8	YNR028W	IDP3	P53982	420 aa	Known RBP	4.64	□□□□□ -1.67
CPR8	YNR028W	CET1	O13297	549 aa	Predicted RBP	4.63	□□□□□ -1.67
CPR8	YNR028W	SES1	P07284	462 aa	Known RBP	4.63	□□□□□ -1.67
CPR8	YNR028W	PHO81	P17442	1178 aa		4.63	□□□□□ -1.67
CPR8	YNR028W	IMD2	P38697	523 aa	Known RBP	4.63	□□□□□ -1.67
CPR8	YNR028W	ERC1	P38767	581 aa		4.63	□□□□□ -1.67
CPR8	YNR028W	NOP2	P40991	618 aa	Known RBP	4.63	□□□□□ -1.67
CPR8	YNR028W	IRC7	P43623	340 aa		4.63	□□□□□ -1.67
CPR8	YNR028W	IMD3	P50095	523 aa	Known RBP	4.63	□□□□□ -1.67
CPR8	YNR028W	PAP2	P53632	584 aa	Known RBP	4.63	□□□□□ -1.67
CPR8	YNR028W	YAT1	P80235	687 aa		4.63	□□□□□ -1.67
CPR8	YNR028W	STP1	Q00947	519 aa		4.63	□□□□□ -1.67
CPR8	YNR028W	SNU56	Q03782	492 aa	Known RBP	4.63	□□□□□ -1.67
CPR8	YNR028W	RAD34	Q06665	692 aa		4.63	□□□□□ -1.67
CPR8	YNR028W	ILV2	P07342	687 aa	Known RBP	4.62	□□□□□ -1.67
CPR8	YNR028W	MAK32	P23060	363 aa		4.62	□□□□□ -1.67
CPR8	YNR028W	ARP2	P32381	391 aa	Known RBP	4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms