RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W TAF5P38129 798 aa5.19□□□□□ -1.58
ROT1YMR200W RFC1P38630 861 aaKnown RBP5.19□□□□□ -1.58
ROT1YMR200W RTT105P40063 208 aa5.19□□□□□ -1.58
ROT1YMR200W IRC5P43610 853 aa5.19□□□□□ -1.58
ROT1YMR200W DUO1P53168 247 aaKnown RBP5.19□□□□□ -1.58
ROT1YMR200W HST1P53685 503 aa5.19□□□□□ -1.58
ROT1YMR200W YML119WQ03208 357 aa5.19□□□□□ -1.58
ROT1YMR200W HOT1Q03213 719 aa5.19□□□□□ -1.58
ROT1YMR200W ADY4Q05955 493 aa5.19□□□□□ -1.58
ROT1YMR200W YDL073WQ07454 984 aa5.19□□□□□ -1.58
ROT1YMR200W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
ROT1YMR200W HUA2Q12134 243 aa5.19□□□□□ -1.58
ROT1YMR200W YBR182C-AQ8TGU6 64 aa5.19□□□□□ -1.58
ROT1YMR200W YEL076C-AP0CX16 216 aa5.18□□□□□ -1.58
ROT1YMR200W YLR464WP0CX17 216 aa5.18□□□□□ -1.58
ROT1YMR200W CDC26P14724 124 aa5.18□□□□□ -1.58
ROT1YMR200W STE50P25344 346 aa5.18□□□□□ -1.58
ROT1YMR200W DGR2P32330 852 aa5.18□□□□□ -1.58
ROT1YMR200W RIB7P33312 244 aa5.18□□□□□ -1.58
ROT1YMR200W YPT53P36019 220 aa5.18□□□□□ -1.58
ROT1YMR200W PZF1P39933 429 aa5.18□□□□□ -1.58
ROT1YMR200W YEL076CP39971 216 aa5.18□□□□□ -1.58
ROT1YMR200W SPO22P40511 975 aa5.18□□□□□ -1.58
ROT1YMR200W PRM2P40534 656 aa5.18□□□□□ -1.58
ROT1YMR200W QRI1P43123 477 aaKnown RBP5.18□□□□□ -1.58
ROT1YMR200W YJL055WP47044 245 aa5.18□□□□□ -1.58
ROT1YMR200W ART5P53244 586 aaKnown RBP5.18□□□□□ -1.58
ROT1YMR200W GND2P53319 492 aa5.18□□□□□ -1.58
ROT1YMR200W GYL1Q04322 720 aa5.18□□□□□ -1.58
ROT1YMR200W AIM32Q04689 311 aa5.18□□□□□ -1.58
ROT1YMR200W SWA2Q06677 668 aa5.18□□□□□ -1.58
ROT1YMR200W IWR1Q07532 353 aaPredicted RBP5.18□□□□□ -1.58
ROT1YMR200W PDH1Q12428 516 aaKnown RBP5.18□□□□□ -1.58
ROT1YMR200W FRE6Q12473 712 aa5.18□□□□□ -1.58
ROT1YMR200W YLR415CO13578 112 aa5.17□□□□□ -1.58
ROT1YMR200W CPA2P03965 1118 aaKnown RBP5.17□□□□□ -1.58
ROT1YMR200W SEC53P07283 254 aaKnown RBP5.17□□□□□ -1.58
ROT1YMR200W THR1P17423 357 aaKnown RBP5.17□□□□□ -1.58
ROT1YMR200W SIR1P21691 654 aa5.17□□□□□ -1.58
ROT1YMR200W SWI4P25302 1093 aaKnown RBP5.17□□□□□ -1.58
ROT1YMR200W SMI1P32566 505 aa5.17□□□□□ -1.58
ROT1YMR200W IME2P32581 645 aa5.17□□□□□ -1.58
ROT1YMR200W RMA1P36001 430 aaKnown RBP5.17□□□□□ -1.58
ROT1YMR200W YKR018CP36114 725 aa5.17□□□□□ -1.58
ROT1YMR200W SET5P38890 526 aaKnown RBP5.17□□□□□ -1.58
ROT1YMR200W VPS41P38959 992 aa5.17□□□□□ -1.58
ROT1YMR200W SGF73P53165 657 aa5.17□□□□□ -1.58
ROT1YMR200W NNF2P53253 936 aa5.17□□□□□ -1.58
ROT1YMR200W OGG1P53397 376 aaPredicted RBP5.17□□□□□ -1.58
ROT1YMR200W VPS75P53853 264 aa5.17□□□□□ -1.58
ROT1YMR200W NOP15P53927 220 aaPredicted RBP5.17□□□□□ -1.58
ROT1YMR200W IRC10Q08118 586 aa5.17□□□□□ -1.58
ROT1YMR200W QCR6P00127 147 aa5.16□□□□□ -1.58
ROT1YMR200W TUF1P02992 437 aaKnown RBP5.16□□□□□ -1.58
ROT1YMR200W PRP22P24384 1145 aaKnown RBP5.16□□□□□ -1.58
ROT1YMR200W LCB1P25045 558 aaKnown RBP5.16□□□□□ -1.58
ROT1YMR200W RRP7P25368 297 aaPredicted RBP5.16□□□□□ -1.58
ROT1YMR200W ADK2P26364 225 aa5.16□□□□□ -1.58
ROT1YMR200W PUP2P32379 260 aa5.16□□□□□ -1.58
ROT1YMR200W YJR061WP40355 935 aa5.16□□□□□ -1.58
ROT1YMR200W YJR039WP47107 1121 aa5.16□□□□□ -1.58
ROT1YMR200W PIL1P53252 339 aaKnown RBP5.16□□□□□ -1.58
ROT1YMR200W GPD1Q00055 391 aaKnown RBP5.16□□□□□ -1.58
ROT1YMR200W TIM44Q01852 431 aa5.16□□□□□ -1.58
ROT1YMR200W OAZ1Q02803 292 aa5.16□□□□□ -1.58
ROT1YMR200W NRG1Q03125 231 aa5.16□□□□□ -1.58
ROT1YMR200W RAD33Q04231 177 aa5.16□□□□□ -1.58
ROT1YMR200W ARP9Q05123 467 aa5.16□□□□□ -1.58
ROT1YMR200W KEL3Q08979 651 aaPredicted RBP5.16□□□□□ -1.58
ROT1YMR200W APL4Q12028 832 aa5.16□□□□□ -1.58
ROT1YMR200W RTK1Q12100 620 aaPredicted RBP5.16□□□□□ -1.58
ROT1YMR200W RRP36Q12481 300 aaPredicted RBP5.16□□□□□ -1.58
ROT1YMR200W PCD1Q12524 340 aa5.16□□□□□ -1.58
ROT1YMR200W YBR126W-AQ8TGU7 68 aa5.16□□□□□ -1.58
ROT1YMR200W YLR149CQ99296 730 aa5.16□□□□□ -1.58
ROT1YMR200W TFB1P32776 642 aa5.15□□□□□ -1.59
ROT1YMR200W GCS1P35197 352 aa5.15□□□□□ -1.59
ROT1YMR200W APE3P37302 537 aaKnown RBP5.15□□□□□ -1.59
ROT1YMR200W RTS1P38903 757 aa5.15□□□□□ -1.59
ROT1YMR200W SSP120P39931 234 aaKnown RBP5.15□□□□□ -1.59
ROT1YMR200W SDS3P40505 327 aa5.15□□□□□ -1.59
ROT1YMR200W YJL163CP46996 555 aa5.15□□□□□ -1.59
ROT1YMR200W PSP1P50896 841 aaKnown RBP5.15□□□□□ -1.59
ROT1YMR200W ADA2Q02336 434 aa5.15□□□□□ -1.59
ROT1YMR200W YPL107WQ02873 248 aa5.15□□□□□ -1.59
ROT1YMR200W DPB4Q04603 196 aaKnown RBP5.15□□□□□ -1.59
ROT1YMR200W RNH1Q04740 348 aa5.15□□□□□ -1.59
ROT1YMR200W YLR407WQ06070 228 aa5.15□□□□□ -1.59
ROT1YMR200W APC5Q08683 685 aa5.15□□□□□ -1.59
ROT1YMR200W TGL5Q12043 749 aa5.15□□□□□ -1.59
ROT1YMR200W YOR111WQ99210 232 aa5.15□□□□□ -1.59
ROT1YMR200W YMR084WA2P2R3 262 aa5.14□□□□□ -1.59
ROT1YMR200W RPS17AP02407 136 aaKnown RBP5.14□□□□□ -1.59
ROT1YMR200W ADE3P07245 946 aaKnown RBP5.14□□□□□ -1.59
ROT1YMR200W SUI3P09064 285 aaKnown RBP5.14□□□□□ -1.59
ROT1YMR200W RPS17BP14127 136 aaKnown RBP5.14□□□□□ -1.59
ROT1YMR200W ACO1P19414 778 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
ROT1YMR200W APN1P22936 367 aa5.14□□□□□ -1.59
ROT1YMR200W RIT1P23796 513 aa5.14□□□□□ -1.59
ROT1YMR200W PEP3P27801 918 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 146.8 ms