RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	CRC1	Q12289	327 aa		3.09	□□□□□ -1.91
PKR1	YMR123W	PNO1	Q99216	274 aa	Known RBP	3.09	□□□□□ -1.91
PKR1	YMR123W	MAK32	P23060	363 aa		3.08	□□□□□ -1.92
PKR1	YMR123W	RRP43	P25359	394 aa	Predicted RBP	3.08	□□□□□ -1.92
PKR1	YMR123W	PRE2	P30656	287 aa	Known RBP	3.08	□□□□□ -1.92
PKR1	YMR123W	FTH1	P38310	465 aa		3.08	□□□□□ -1.92
PKR1	YMR123W	ARO9	P38840	513 aa	Predicted RBP	3.08	□□□□□ -1.92
PKR1	YMR123W	MTG2	P38860	518 aa		3.08	□□□□□ -1.92
PKR1	YMR123W	SPC97	P38863	823 aa		3.08	□□□□□ -1.92
PKR1	YMR123W	IMA5	P40884	581 aa		3.08	□□□□□ -1.92
PKR1	YMR123W	NOP2	P40991	618 aa	Known RBP	3.08	□□□□□ -1.92
PKR1	YMR123W	POL31	P46957	487 aa		3.08	□□□□□ -1.92
PKR1	YMR123W	YPL068C	Q02749	293 aa		3.08	□□□□□ -1.92
PKR1	YMR123W	UBP16	Q02863	499 aa		3.08	□□□□□ -1.92
PKR1	YMR123W	YPL071C	Q02864	156 aa		3.08	□□□□□ -1.92
PKR1	YMR123W	PLM2	Q04383	521 aa		3.08	□□□□□ -1.92
PKR1	YMR123W	CRD1	Q07560	283 aa		3.08	□□□□□ -1.92
PKR1	YMR123W	YDL242W	Q07746	117 aa		3.08	□□□□□ -1.92
PKR1	YMR123W	CIR2	Q08822	631 aa		3.08	□□□□□ -1.92
PKR1	YMR123W	CTT1	P06115	562 aa		3.07	□□□□□ -1.92
PKR1	YMR123W	ADH4	P10127	382 aa		3.07	□□□□□ -1.92
PKR1	YMR123W	YAP1	P19880	650 aa	Known RBP	3.07	□□□□□ -1.92
PKR1	YMR123W	LNP1	P38878	278 aa		3.07	□□□□□ -1.92
PKR1	YMR123W	SWD1	P39706	426 aa		3.07	□□□□□ -1.92
PKR1	YMR123W	SAP1	P39955	897 aa	Known RBP	3.07	□□□□□ -1.92
PKR1	YMR123W	JHD1	P40034	492 aa		3.07	□□□□□ -1.92
PKR1	YMR123W	PCI8	P40512	444 aa		3.07	□□□□□ -1.92
PKR1	YMR123W	IRC7	P43623	340 aa		3.07	□□□□□ -1.92
PKR1	YMR123W	RAD34	Q06665	692 aa		3.07	□□□□□ -1.92
PKR1	YMR123W	AAD4	Q07747	329 aa		3.07	□□□□□ -1.92
PKR1	YMR123W	YER175W-A	Q8TGU4	54 aa		3.07	□□□□□ -1.92
PKR1	YMR123W	YMR085W	P0CF18	432 aa		3.06	□□□□□ -1.92
PKR1	YMR123W	IMD2	P38697	523 aa	Known RBP	3.06	□□□□□ -1.92
PKR1	YMR123W	CFD1	P40558	293 aa		3.06	□□□□□ -1.92
PKR1	YMR123W	ASK10	P48361	1146 aa		3.06	□□□□□ -1.92
PKR1	YMR123W	IMD3	P50095	523 aa	Known RBP	3.06	□□□□□ -1.92
PKR1	YMR123W	COP1	P53622	1201 aa	Known RBP	3.06	□□□□□ -1.92
PKR1	YMR123W	ACS1	Q01574	713 aa		3.06	□□□□□ -1.92
PKR1	YMR123W	VPS64	Q03944	604 aa		3.06	□□□□□ -1.92
PKR1	YMR123W	CRF1	Q04930	467 aa		3.06	□□□□□ -1.92
PKR1	YMR123W	LYS21	Q12122	440 aa	Known RBP	3.06	□□□□□ -1.92
PKR1	YMR123W	SES1	P07284	462 aa	Known RBP	3.05	□□□□□ -1.92
PKR1	YMR123W	YER190C-B	P0CX94	160 aa		3.05	□□□□□ -1.92
PKR1	YMR123W	YEL077W-A	P0CX95	160 aa		3.05	□□□□□ -1.92
PKR1	YMR123W	YGR296C-B	P0CX96	160 aa		3.05	□□□□□ -1.92
PKR1	YMR123W	YPL283W-B	P0CX97	160 aa		3.05	□□□□□ -1.92
PKR1	YMR123W	YPR204C-A	P0CX98	160 aa		3.05	□□□□□ -1.92
PKR1	YMR123W	RPS7A	P26786	190 aa	Known RBP	3.05	□□□□□ -1.92
PKR1	YMR123W	ASK1	P35734	292 aa		3.05	□□□□□ -1.92
PKR1	YMR123W	ARB1	P40024	610 aa	Known RBP	3.05	□□□□□ -1.92
PKR1	YMR123W	YIL024C	P40543	189 aa		3.05	□□□□□ -1.92
PKR1	YMR123W	CIN1	P40987	1014 aa		3.05	□□□□□ -1.92
PKR1	YMR123W	YNL034W	P53963	612 aa		3.05	□□□□□ -1.92
PKR1	YMR123W	AAT1	Q01802	451 aa		3.05	□□□□□ -1.92
PKR1	YMR123W	SNU56	Q03782	492 aa	Known RBP	3.05	□□□□□ -1.92
PKR1	YMR123W	YML053C	Q04978	212 aa		3.05	□□□□□ -1.92
PKR1	YMR123W	YPL191C	Q08930	360 aa		3.05	□□□□□ -1.92
PKR1	YMR123W	ARP7	Q12406	477 aa		3.05	□□□□□ -1.92
PKR1	YMR123W	RTC1	Q08281	1341 aa		3.04	□□□□□ -1.92
PKR1	YMR123W	YPR089W	O13585	888 aa		3.04	□□□□□ -1.92
PKR1	YMR123W	ILS1	P09436	1072 aa	Known RBP	3.04	□□□□□ -1.92
PKR1	YMR123W	COQ3	P27680	312 aa		3.04	□□□□□ -1.92
PKR1	YMR123W	VBA2	P38358	474 aa	Known RBP	3.04	□□□□□ -1.92
PKR1	YMR123W	ERC1	P38767	581 aa		3.04	□□□□□ -1.92
PKR1	YMR123W	IRC8	P47046	822 aa		3.04	□□□□□ -1.92
PKR1	YMR123W	SCW4	P53334	386 aa	Known RBP	3.04	□□□□□ -1.92
PKR1	YMR123W	ESF2	P53743	316 aa	Known RBP	3.04	□□□□□ -1.92
PKR1	YMR123W	TGL2	P54857	326 aa		3.04	□□□□□ -1.92
PKR1	YMR123W	YAT1	P80235	687 aa		3.04	□□□□□ -1.92
PKR1	YMR123W	CEG1	Q01159	459 aa	Predicted RBP	3.04	□□□□□ -1.92
PKR1	YMR123W	AIM6	Q07716	390 aa		3.04	□□□□□ -1.92
PKR1	YMR123W	YBR255C-A	Q3E776	120 aa		3.04	□□□□□ -1.92
PKR1	YMR123W	PDE1	P22434	369 aa		3.03	□□□□□ -1.92
PKR1	YMR123W	FRD1	P32614	470 aa	Known RBP	3.03	□□□□□ -1.92
PKR1	YMR123W	RPF2	P36160	344 aa	Known RBP	3.03	□□□□□ -1.92
PKR1	YMR123W	YMR124W	P39523	943 aa	Known RBP	3.03	□□□□□ -1.92
PKR1	YMR123W	ARA2	Q04212	335 aa		3.03	□□□□□ -1.92
PKR1	YMR123W	MRPL1	Q04599	285 aa		3.03	□□□□□ -1.92
PKR1	YMR123W	GET3	Q12154	354 aa	Known RBP	3.03	□□□□□ -1.92
PKR1	YMR123W	YPT1	P01123	206 aa	Known RBP	3.02	□□□□□ -1.93
PKR1	YMR123W	YUR1	P26725	428 aa		3.02	□□□□□ -1.93
PKR1	YMR123W	SWC3	P31376	625 aa		3.02	□□□□□ -1.93
PKR1	YMR123W	NIC96	P34077	839 aa		3.02	□□□□□ -1.93
PKR1	YMR123W	VTC3	Q02725	835 aa		3.02	□□□□□ -1.93
PKR1	YMR123W	YOR389W	Q08912	624 aa		3.02	□□□□□ -1.93
PKR1	YMR123W	AIM17	P23180	465 aa	Known RBP	3.01	□□□□□ -1.93
PKR1	YMR123W	MGM1	P32266	881 aa		3.01	□□□□□ -1.93
PKR1	YMR123W	SIP1	P32578	815 aa		3.01	□□□□□ -1.93
PKR1	YMR123W	TOM71	P38825	639 aa	Known RBP	3.01	□□□□□ -1.93
PKR1	YMR123W	STT3	P39007	718 aa	Known RBP	3.01	□□□□□ -1.93
PKR1	YMR123W	ERV46	P39727	415 aa		3.01	□□□□□ -1.93
PKR1	YMR123W	PEX8	P53248	589 aa		3.01	□□□□□ -1.93
PKR1	YMR123W	RPL15B	P54780	204 aa	Predicted RBP	3.01	□□□□□ -1.93
PKR1	YMR123W	SND1	Q04007	877 aa		3.01	□□□□□ -1.93
PKR1	YMR123W	EIS1	Q05050	843 aa	Known RBP	3.01	□□□□□ -1.93
PKR1	YMR123W	HER1	Q12276	1246 aa		3.01	□□□□□ -1.93
PKR1	YMR123W	TMA7	Q3E764	64 aa	Known RBP	3.01	□□□□□ -1.93
PKR1	YMR123W	ILV2	P07342	687 aa	Known RBP	3	□□□□□ -1.93
PKR1	YMR123W	SIR1	P21691	654 aa		3	□□□□□ -1.93
PKR1	YMR123W	YCP4	P25349	247 aa	Known RBP	3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms