RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C TBS1P38114 1094 aa11.28□□□□□ -0.6
SPT8YLR055C QNS1P38795 714 aaKnown RBP11.28□□□□□ -0.6
SPT8YLR055C NUP60P39705 539 aa11.28□□□□□ -0.6
SPT8YLR055C NUP84P52891 726 aa11.28□□□□□ -0.6
SPT8YLR055C IMA2Q08295 589 aa11.28□□□□□ -0.6
SPT8YLR055C SPT16P32558 1035 aaKnown RBP11.28□□□□□ -0.6
SPT8YLR055C NPL6P32832 435 aa11.28□□□□□ -0.6
SPT8YLR055C SLM4P38247 162 aa11.28□□□□□ -0.6
SPT8YLR055C YHR202WP38887 602 aa11.28□□□□□ -0.6
SPT8YLR055C IAH1P41734 238 aa11.28□□□□□ -0.6
SPT8YLR055C SET2P46995 733 aaKnown RBP11.28□□□□□ -0.6
SPT8YLR055C VMA10P48836 114 aaKnown RBP11.28□□□□□ -0.6
SPT8YLR055C NMA2P53204 395 aa11.28□□□□□ -0.6
SPT8YLR055C RRP15Q06511 250 aaPredicted RBP11.28□□□□□ -0.6
SPT8YLR055C PRP6P19735 899 aaPredicted RBP11.27□□□□□ -0.61
SPT8YLR055C BIO2P32451 375 aa11.27□□□□□ -0.61
SPT8YLR055C AMN1P38285 549 aaPredicted RBP11.27□□□□□ -0.61
SPT8YLR055C SAH1P39954 449 aaKnown RBP11.27□□□□□ -0.61
SPT8YLR055C MPH1P40562 993 aa11.27□□□□□ -0.61
SPT8YLR055C TAH11P47112 604 aa11.27□□□□□ -0.61
SPT8YLR055C RCF2P53721 224 aa11.27□□□□□ -0.61
SPT8YLR055C GPD1Q00055 391 aaKnown RBP11.27□□□□□ -0.61
SPT8YLR055C PRC1P00729 532 aa11.26□□□□□ -0.61
SPT8YLR055C TUB1P09733 447 aaKnown RBP11.26□□□□□ -0.61
SPT8YLR055C VPS3P23643 1011 aa11.26□□□□□ -0.61
SPT8YLR055C RIM2P38127 377 aa11.26□□□□□ -0.61
SPT8YLR055C SWC5P38326 303 aa11.26□□□□□ -0.61
SPT8YLR055C SSP120P39931 234 aaKnown RBP11.26□□□□□ -0.61
SPT8YLR055C COG2P53271 262 aa11.26□□□□□ -0.61
SPT8YLR055C NOP13P53883 403 aaKnown RBP RIP-Chip data11.26□□□□□ -0.61not detected
SPT8YLR055C STP1Q00947 519 aa11.26□□□□□ -0.61
SPT8YLR055C PNG1Q02890 363 aa11.26□□□□□ -0.61
SPT8YLR055C TVP15Q03860 143 aa11.26□□□□□ -0.61
SPT8YLR055C YPR027CQ12079 277 aa11.26□□□□□ -0.61
SPT8YLR055C SEC63P14906 663 aa11.25□□□□□ -0.61
SPT8YLR055C SEC1P30619 724 aaKnown RBP11.25□□□□□ -0.61
SPT8YLR055C KAR9P32526 644 aa11.25□□□□□ -0.61
SPT8YLR055C SPR1P32603 445 aa11.25□□□□□ -0.61
SPT8YLR055C KES1P35844 434 aaKnown RBP11.25□□□□□ -0.61
SPT8YLR055C PDX3P38075 228 aaKnown RBP11.25□□□□□ -0.61
SPT8YLR055C CKB2P38930 258 aa11.25□□□□□ -0.61
SPT8YLR055C DCP2P53550 970 aaKnown RBP11.25□□□□□ -0.61
SPT8YLR055C RNY1Q02933 434 aaKnown RBP11.25□□□□□ -0.61
SPT8YLR055C YET2Q04210 160 aa11.25□□□□□ -0.61
SPT8YLR055C CUE5Q08412 411 aaKnown RBP11.25□□□□□ -0.61
SPT8YLR055C YIG1Q08956 461 aa11.25□□□□□ -0.61
SPT8YLR055C ADF1Q2V2Q1 113 aa11.25□□□□□ -0.61
SPT8YLR055C YLR422WQ06409 1932 aa11.25□□□□□ -0.61
SPT8YLR055C MPH2P0CD99 609 aa11.25□□□□□ -0.61
SPT8YLR055C GPA2P10823 449 aa11.25□□□□□ -0.61
SPT8YLR055C STE6P12866 1290 aa11.25□□□□□ -0.61
SPT8YLR055C SAN1P22470 610 aa11.25□□□□□ -0.61
SPT8YLR055C ADY2P25613 283 aa11.25□□□□□ -0.61
SPT8YLR055C YKR015CP36111 568 aa11.25□□□□□ -0.61
SPT8YLR055C AGP2P38090 596 aa11.25□□□□□ -0.61
SPT8YLR055C POL31P46957 487 aa11.25□□□□□ -0.61
SPT8YLR055C ZAP1P47043 880 aa11.25□□□□□ -0.61
SPT8YLR055C TEL2P53038 688 aa11.25□□□□□ -0.61
SPT8YLR055C SPC98P53540 846 aa11.25□□□□□ -0.61
SPT8YLR055C YNL247WP53852 767 aaKnown RBP11.25□□□□□ -0.61
SPT8YLR055C SPP1Q03012 353 aa11.25□□□□□ -0.61
SPT8YLR055C TIF35Q04067 274 aaKnown RBP11.25□□□□□ -0.61
SPT8YLR055C ORM2Q06144 216 aa11.25□□□□□ -0.61
SPT8YLR055C HAP2P06774 265 aa11.24□□□□□ -0.61
SPT8YLR055C CHS1P08004 1131 aa11.24□□□□□ -0.61
SPT8YLR055C DPB2P24482 689 aaPredicted RBP11.24□□□□□ -0.61
SPT8YLR055C CYM1P32898 989 aa11.24□□□□□ -0.61
SPT8YLR055C CTP1P38152 299 aa11.24□□□□□ -0.61
SPT8YLR055C GEM1P39722 662 aa11.24□□□□□ -0.61
SPT8YLR055C FMP10P40098 244 aa11.24□□□□□ -0.61
SPT8YLR055C CAB2P40506 365 aa11.24□□□□□ -0.61
SPT8YLR055C MET13P53128 600 aa11.24□□□□□ -0.61
SPT8YLR055C YGL108CP53139 140 aa11.24□□□□□ -0.61
SPT8YLR055C SFB2P53953 876 aa11.24□□□□□ -0.61
SPT8YLR055C ASI1P54074 624 aa11.24□□□□□ -0.61
SPT8YLR055C CDC55Q00362 526 aa11.24□□□□□ -0.61
SPT8YLR055C ASA1Q06822 443 aa11.24□□□□□ -0.61
SPT8YLR055C VIK1Q12045 647 aa11.24□□□□□ -0.61
SPT8YLR055C HRT3Q12347 344 aa11.24□□□□□ -0.61
SPT8YLR055C RGR1P19263 1082 aa11.23□□□□□ -0.61
SPT8YLR055C PHO89P38361 574 aa11.23□□□□□ -0.61
SPT8YLR055C ARC1P46672 376 aaKnown RBP11.23□□□□□ -0.61
SPT8YLR055C NOP9P47077 666 aaKnown RBP11.23□□□□□ -0.61
SPT8YLR055C ASI2P53895 289 aa11.23□□□□□ -0.61
SPT8YLR055C NMA111P53920 997 aa11.23□□□□□ -0.61
SPT8YLR055C TMA20P89886 181 aaPredicted RBP11.23□□□□□ -0.61
SPT8YLR055C YMR209CQ03648 457 aa11.23□□□□□ -0.61
SPT8YLR055C YDR179W-AQ03983 463 aa11.23□□□□□ -0.61
SPT8YLR055C AAD15Q08361 143 aa11.23□□□□□ -0.61
SPT8YLR055C MSH5Q12175 901 aa11.23□□□□□ -0.61
SPT8YLR055C IES3Q12345 250 aa11.23□□□□□ -0.61
SPT8YLR055C DBP10Q12389 995 aaKnown RBP11.23□□□□□ -0.61
SPT8YLR055C GAL80P04387 435 aa11.23□□□□□ -0.61
SPT8YLR055C ATR1P13090 542 aa11.23□□□□□ -0.61
SPT8YLR055C YCR015CP25616 317 aa11.23□□□□□ -0.61
SPT8YLR055C TFC1P32367 649 aa11.23□□□□□ -0.61
SPT8YLR055C BCK2P33306 851 aa11.23□□□□□ -0.61
SPT8YLR055C GCS1P35197 352 aa11.23□□□□□ -0.61
SPT8YLR055C RFS1P38234 210 aaKnown RBP11.23□□□□□ -0.61
SPT8YLR055C GGA2P38817 585 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 313.8 ms