RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C YIL108WP40483 696 aaKnown RBP7.46□□□□□ -1.22
PUP2YGR253C NBP35P52920 328 aa7.46□□□□□ -1.22
PUP2YGR253C YNL108CP53929 270 aa7.46□□□□□ -1.22
PUP2YGR253C CDC55Q00362 526 aa7.46□□□□□ -1.22
PUP2YGR253C YPR114WQ06107 315 aa7.46□□□□□ -1.22
PUP2YGR253C TFB4Q12004 338 aa7.46□□□□□ -1.22
PUP2YGR253C AFI1Q99222 893 aa7.46□□□□□ -1.22
PUP2YGR253C GAL4P04386 881 aa7.45□□□□□ -1.22
PUP2YGR253C MTF2P10849 440 aa7.45□□□□□ -1.22
PUP2YGR253C TRM1P15565 570 aaKnown RBP7.45□□□□□ -1.22
PUP2YGR253C RDS2P19541 446 aaKnown RBP7.45□□□□□ -1.22
PUP2YGR253C BRF1P29056 596 aa7.45□□□□□ -1.22
PUP2YGR253C VFA1P40080 203 aa7.45□□□□□ -1.22
PUP2YGR253C RRN7P40992 514 aa7.45□□□□□ -1.22
PUP2YGR253C DLD2P46681 530 aaKnown RBP7.45□□□□□ -1.22
PUP2YGR253C TRF5P48561 642 aaKnown RBP7.45□□□□□ -1.22
PUP2YGR253C MTO1P53070 669 aa7.45□□□□□ -1.22
PUP2YGR253C UME1Q03010 460 aa7.45□□□□□ -1.22
PUP2YGR253C YLR287CQ05881 355 aa7.45□□□□□ -1.22
PUP2YGR253C BNA5Q05979 453 aa7.45□□□□□ -1.22
PUP2YGR253C THI73Q07904 523 aa7.45□□□□□ -1.22
PUP2YGR253C SRO7Q12038 1033 aa7.45□□□□□ -1.22
PUP2YGR253C YIL046W-AQ3E7Z4 54 aa7.45□□□□□ -1.22
PUP2YGR253C ATE1P16639 503 aa7.44□□□□□ -1.22
PUP2YGR253C RPN12P32496 274 aa7.44□□□□□ -1.22
PUP2YGR253C SLD2P34252 453 aa7.44□□□□□ -1.22
PUP2YGR253C NCL1P38205 684 aaKnown RBP7.44□□□□□ -1.22
PUP2YGR253C MUM2P38236 366 aa7.44□□□□□ -1.22
PUP2YGR253C DJP1P40564 432 aa7.44□□□□□ -1.22
PUP2YGR253C RRT5P43607 289 aa7.44□□□□□ -1.22
PUP2YGR253C RPS10BP46784 105 aaKnown RBP7.44□□□□□ -1.22
PUP2YGR253C PPN1Q04119 674 aa7.44□□□□□ -1.22
PUP2YGR253C SWC7Q06707 132 aa7.44□□□□□ -1.22
PUP2YGR253C RPS10AQ08745 105 aaPredicted RBP7.44□□□□□ -1.22
PUP2YGR253C GPM3Q12326 303 aa7.44□□□□□ -1.22
PUP2YGR253C SBP1P10080 294 aaKnown RBP7.43□□□□□ -1.22
PUP2YGR253C SCH9P11792 824 aaKnown RBP7.43□□□□□ -1.22
PUP2YGR253C CLC1P17891 233 aa7.43□□□□□ -1.22
PUP2YGR253C STE4P18851 423 aa7.43□□□□□ -1.22
PUP2YGR253C SMC2P38989 1170 aaKnown RBP7.43□□□□□ -1.22
PUP2YGR253C ERP2P39704 215 aa7.43□□□□□ -1.22
PUP2YGR253C KHA1P40309 873 aa7.43□□□□□ -1.22
PUP2YGR253C MNN11P46985 422 aaKnown RBP7.43□□□□□ -1.22
PUP2YGR253C YJL132WP47014 750 aa7.43□□□□□ -1.22
PUP2YGR253C NRD1P53617 575 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
PUP2YGR253C IPI3P53877 555 aa7.43□□□□□ -1.22
PUP2YGR253C VAC7P53950 1165 aa7.43□□□□□ -1.22
PUP2YGR253C YNL040WP53960 456 aaPredicted RBP7.43□□□□□ -1.22
PUP2YGR253C YDR444WQ04093 687 aa7.43□□□□□ -1.22
PUP2YGR253C ERV41Q04651 352 aa7.43□□□□□ -1.22
PUP2YGR253C KAP95Q06142 861 aaKnown RBP7.43□□□□□ -1.22
PUP2YGR253C IZH4Q99393 312 aa7.43□□□□□ -1.22
PUP2YGR253C PMA2P19657 947 aa7.42□□□□□ -1.22
PUP2YGR253C PRP9P19736 530 aaKnown RBP7.42□□□□□ -1.22
PUP2YGR253C AIM26P32858 118 aa7.42□□□□□ -1.22
PUP2YGR253C ALY1P36117 915 aa7.42□□□□□ -1.22
PUP2YGR253C UBP14P38237 781 aaKnown RBP7.42□□□□□ -1.22
PUP2YGR253C BIT2P38346 545 aa7.42□□□□□ -1.22
PUP2YGR253C PPE1P38796 400 aa7.42□□□□□ -1.22
PUP2YGR253C TCB2P48231 1178 aa7.42□□□□□ -1.22
PUP2YGR253C SPC105P53148 917 aa7.42□□□□□ -1.22
PUP2YGR253C SSL2Q00578 843 aa7.42□□□□□ -1.22
PUP2YGR253C REG1Q00816 1014 aa7.42□□□□□ -1.22
PUP2YGR253C YDR131CQ03899 556 aa7.42□□□□□ -1.22
PUP2YGR253C TRE2Q08693 809 aa7.42□□□□□ -1.22
PUP2YGR253C RRP6Q12149 733 aaKnown RBP7.42□□□□□ -1.22
PUP2YGR253C EFG1Q3E705 233 aaKnown RBP7.42□□□□□ -1.22
PUP2YGR253C SEY1Q99287 776 aa7.42□□□□□ -1.22
PUP2YGR253C UBR1P19812 1950 aa7.41□□□□□ -1.22
PUP2YGR253C YKR104WP0CE69 306 aa7.41□□□□□ -1.22
PUP2YGR253C PAT1P25644 796 aaKnown RBP7.41□□□□□ -1.22
PUP2YGR253C HXT3P32466 567 aaKnown RBP7.41□□□□□ -1.22
PUP2YGR253C MRS6P32864 603 aaKnown RBP7.41□□□□□ -1.22
PUP2YGR253C YHL041WP38730 149 aa7.41□□□□□ -1.22
PUP2YGR253C ELO1P39540 310 aa7.41□□□□□ -1.22
PUP2YGR253C YGR127WP53275 312 aa7.41□□□□□ -1.22
PUP2YGR253C YNL247WP53852 767 aaKnown RBP7.41□□□□□ -1.22
PUP2YGR253C RPL34AP87262 121 aaPredicted RBP7.41□□□□□ -1.22
PUP2YGR253C CMS1Q07897 291 aaKnown RBP7.41□□□□□ -1.22
PUP2YGR253C OCA6Q12454 224 aa7.41□□□□□ -1.22
PUP2YGR253C RIP1P08067 215 aa7.4□□□□□ -1.22
PUP2YGR253C MPH2P0CD99 609 aa7.4□□□□□ -1.22
PUP2YGR253C AAT2P23542 418 aaKnown RBP7.4□□□□□ -1.22
PUP2YGR253C RBK1P25332 333 aa7.4□□□□□ -1.22
PUP2YGR253C SNT1P25357 1226 aa7.4□□□□□ -1.22
PUP2YGR253C MCM2P29469 868 aa7.4□□□□□ -1.22
PUP2YGR253C MSR1P38714 643 aa7.4□□□□□ -1.22
PUP2YGR253C LRP1P38801 184 aaKnown RBP7.4□□□□□ -1.22
PUP2YGR253C ATM1P40416 690 aa7.4□□□□□ -1.22
PUP2YGR253C SET2P46995 733 aaKnown RBP7.4□□□□□ -1.22
PUP2YGR253C VPS9P54787 451 aa7.4□□□□□ -1.22
PUP2YGR253C IVY1Q04934 453 aa7.4□□□□□ -1.22
PUP2YGR253C TPO1Q07824 586 aa7.4□□□□□ -1.22
PUP2YGR253C PGC1Q08959 321 aa7.4□□□□□ -1.22
PUP2YGR253C SUL2Q12325 893 aa7.4□□□□□ -1.22
PUP2YGR253C HFA1P32874 2273 aa7.4□□□□□ -1.23
PUP2YGR253C GFA1P14742 717 aaKnown RBP7.39□□□□□ -1.23
PUP2YGR253C DAL82P21705 255 aa7.39□□□□□ -1.23
PUP2YGR253C RTT107P38850 1070 aa7.39□□□□□ -1.23
PUP2YGR253C AIM18P38884 321 aa7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms